Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm26207-201ENSMUST00000082909 104 ntBASIC-1.39□□□□□ -2.63
Trav12-1A0N8R1 Gm25859-201ENSMUST00000083710 91 ntBASIC-1.39□□□□□ -2.63
Trav12-1A0N8R1 Gm24714-201ENSMUST00000102382 101 ntBASIC-1.4□□□□□ -2.63
Trav12-1A0N8R1 Mir350-201ENSMUST00000083639 99 ntBASIC-1.4□□□□□ -2.63
Trav12-1A0N8R1 Gm26108-201ENSMUST00000083973 191 ntBASIC-1.4□□□□□ -2.63
Trav12-1A0N8R1 Snord67-201ENSMUST00000104033 111 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm23025-201ENSMUST00000158769 111 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm22234-201ENSMUST00000174906 65 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm24761-201ENSMUST00000179589 127 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm27659-201ENSMUST00000183472 98 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm38183-201ENSMUST00000193189 205 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm5001-201ENSMUST00000204361 331 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 AC132615.1-201ENSMUST00000213873 255 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm23515-201ENSMUST00000082829 107 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 Gm24764-201ENSMUST00000083686 199 ntBASIC-1.41□□□□□ -2.64
Trav12-1A0N8R1 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm12785-201ENSMUST00000122052 172 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm24198-201ENSMUST00000157812 108 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Snora26-201ENSMUST00000175614 121 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm23770-201ENSMUST00000178009 108 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm22832-201ENSMUST00000178022 108 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm23863-201ENSMUST00000178265 108 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm24828-201ENSMUST00000178507 108 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm23052-201ENSMUST00000178633 108 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm25729-201ENSMUST00000179050 108 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm25359-201ENSMUST00000179315 108 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm22624-201ENSMUST00000179913 108 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm18291-201ENSMUST00000190791 301 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Mir30f-201ENSMUST00000196073 92 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm22578-201ENSMUST00000083730 107 ntBASIC-1.42□□□□□ -2.64
Trav12-1A0N8R1 Gm24129-201ENSMUST00000158537 97 ntBASIC-1.43□□□□□ -2.64
Trav12-1A0N8R1 Gm25771-201ENSMUST00000158565 144 ntBASIC-1.43□□□□□ -2.64
Trav12-1A0N8R1 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-1.43□□□□□ -2.64
Trav12-1A0N8R1 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.43□□□□□ -2.64
Trav12-1A0N8R1 Gm43381-201ENSMUST00000198553 165 ntBASIC-1.43□□□□□ -2.64
Trav12-1A0N8R1 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
Trav12-1A0N8R1 Gm23148-201ENSMUST00000180367 107 ntBASIC-1.44□□□□□ -2.64
Trav12-1A0N8R1 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC-1.44□□□□□ -2.64
Trav12-1A0N8R1 Gm44726-201ENSMUST00000203427 217 ntBASIC-1.44□□□□□ -2.64
Trav12-1A0N8R1 AC154484.1-201ENSMUST00000227311 771 ntBASIC-1.44□□□□□ -2.64
Trav12-1A0N8R1 Gm25258-201ENSMUST00000083049 107 ntBASIC-1.44□□□□□ -2.64
Trav12-1A0N8R1 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.44□□□□□ -2.64
Trav12-1A0N8R1 Gm22105-201ENSMUST00000116734 116 ntBASIC-1.45□□□□□ -2.64
Trav12-1A0N8R1 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.45□□□□□ -2.64
Trav12-1A0N8R1 Gm25522-201ENSMUST00000158394 105 ntBASIC-1.45□□□□□ -2.64
Trav12-1A0N8R1 Gm23571-201ENSMUST00000180073 127 ntBASIC-1.45□□□□□ -2.64
Trav12-1A0N8R1 Gm29140-201ENSMUST00000190187 476 ntBASIC-1.45□□□□□ -2.64
Trav12-1A0N8R1 Mir677-202ENSMUST00000197076 78 ntBASIC-1.45□□□□□ -2.64
Trav12-1A0N8R1 Gm43927-201ENSMUST00000204599 117 ntBASIC-1.45□□□□□ -2.64
Trav12-1A0N8R1 Gm26164-201ENSMUST00000083793 104 ntBASIC-1.45□□□□□ -2.64
Trav12-1A0N8R1 Gm14001-201ENSMUST00000118847 247 ntBASIC-1.46□□□□□ -2.64
Trav12-1A0N8R1 Gm15654-201ENSMUST00000152660 300 ntBASIC-1.46□□□□□ -2.64
Trav12-1A0N8R1 Gm24901-201ENSMUST00000158125 110 ntBASIC-1.46□□□□□ -2.64
Trav12-1A0N8R1 Gm26133-201ENSMUST00000157363 100 ntBASIC-1.47□□□□□ -2.64
Trav12-1A0N8R1 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC-1.47□□□□□ -2.64
Trav12-1A0N8R1 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
Trav12-1A0N8R1 Gm26437-201ENSMUST00000082595 105 ntBASIC-1.47□□□□□ -2.64
Trav12-1A0N8R1 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.47□□□□□ -2.64
Trav12-1A0N8R1 Gm23012-201ENSMUST00000104149 83 ntBASIC-1.48□□□□□ -2.65
Trav12-1A0N8R1 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-1.48□□□□□ -2.65
Trav12-1A0N8R1 Gm23536-201ENSMUST00000157541 134 ntBASIC-1.48□□□□□ -2.65
Trav12-1A0N8R1 Gm25974-201ENSMUST00000158701 94 ntBASIC-1.48□□□□□ -2.65
Trav12-1A0N8R1 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.48□□□□□ -2.65
Trav12-1A0N8R1 Mir465d-201ENSMUST00000196314 58 ntBASIC-1.48□□□□□ -2.65
Trav12-1A0N8R1 Gm23625-201ENSMUST00000082457 100 ntBASIC-1.48□□□□□ -2.65
Trav12-1A0N8R1 Gm14007-201ENSMUST00000118288 210 ntBASIC-1.49□□□□□ -2.65
Trav12-1A0N8R1 Gm24250-201ENSMUST00000157320 135 ntBASIC-1.49□□□□□ -2.65
Trav12-1A0N8R1 Gm24073-201ENSMUST00000158177 106 ntBASIC-1.49□□□□□ -2.65
Trav12-1A0N8R1 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC-1.49□□□□□ -2.65
Trav12-1A0N8R1 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-1.49□□□□□ -2.65
Trav12-1A0N8R1 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC-1.49□□□□□ -2.65
Trav12-1A0N8R1 Gm13801-201ENSMUST00000120750 160 ntBASIC-1.5□□□□□ -2.65
Trav12-1A0N8R1 Gm24296-201ENSMUST00000158297 106 ntBASIC-1.5□□□□□ -2.65
Trav12-1A0N8R1 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.5□□□□□ -2.65
Trav12-1A0N8R1 Mir216b-201ENSMUST00000102363 86 ntBASIC-1.51□□□□□ -2.65
Trav12-1A0N8R1 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.51□□□□□ -2.65
Trav12-1A0N8R1 Gm22489-201ENSMUST00000116813 62 ntBASIC-1.51□□□□□ -2.65
Trav12-1A0N8R1 Gm11407-201ENSMUST00000120362 1058 ntBASIC-1.51□□□□□ -2.65
Trav12-1A0N8R1 Gm38019-201ENSMUST00000195133 380 ntBASIC-1.51□□□□□ -2.65
Trav12-1A0N8R1 Gm42795-201ENSMUST00000198847 76 ntBASIC-1.51□□□□□ -2.65
Trav12-1A0N8R1 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.51□□□□□ -2.65
Trav12-1A0N8R1 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.52□□□□□ -2.65
Trav12-1A0N8R1 Gm26255-201ENSMUST00000122492 103 ntBASIC-1.52□□□□□ -2.65
Trav12-1A0N8R1 Gm22097-201ENSMUST00000157929 278 ntBASIC-1.52□□□□□ -2.65
Trav12-1A0N8R1 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.52□□□□□ -2.65
Trav12-1A0N8R1 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-1.52□□□□□ -2.65
Trav12-1A0N8R1 Gm28917-201ENSMUST00000187294 237 ntBASIC-1.52□□□□□ -2.65
Trav12-1A0N8R1 Gm44392-201ENSMUST00000196758 115 ntBASIC-1.52□□□□□ -2.65
Trav12-1A0N8R1 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC-1.52□□□□□ -2.65
Trav12-1A0N8R1 AC192333.2-201ENSMUST00000224771 196 ntBASIC-1.52□□□□□ -2.65
Trav12-1A0N8R1 Mir759-201ENSMUST00000103254 98 ntBASIC-1.53□□□□□ -2.65
Trav12-1A0N8R1 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
Trav12-1A0N8R1 Gm24635-201ENSMUST00000122712 128 ntBASIC-1.53□□□□□ -2.65
Trav12-1A0N8R1 Gm24315-201ENSMUST00000177835 127 ntBASIC-1.53□□□□□ -2.65
Trav12-1A0N8R1 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.53□□□□□ -2.65
Trav12-1A0N8R1 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 76,532 protein–RNA pairs in 866.8 ms