Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm27648-201ENSMUST00000184315 107 ntBASIC2.79□□□□□ -1.96
Nubp1Q9R060 Gm26379-202ENSMUST00000200225 132 ntBASIC2.79□□□□□ -1.96
Nubp1Q9R060 Gm24203-201ENSMUST00000082949 114 ntBASIC2.79□□□□□ -1.96
Nubp1Q9R060 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Nubp1Q9R060 Gm15654-201ENSMUST00000152660 300 ntBASIC2.78□□□□□ -1.96
Nubp1Q9R060 Gm23470-201ENSMUST00000157129 120 ntBASIC2.78□□□□□ -1.96
Nubp1Q9R060 Gm25382-201ENSMUST00000157811 97 ntBASIC2.78□□□□□ -1.96
Nubp1Q9R060 Gm25949-201ENSMUST00000175333 114 ntBASIC2.78□□□□□ -1.96
Nubp1Q9R060 Snord43-201ENSMUST00000199549 108 ntBASIC2.78□□□□□ -1.96
Nubp1Q9R060 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC2.78□□□□□ -1.96
Nubp1Q9R060 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.78□□□□□ -1.96
Nubp1Q9R060 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Nubp1Q9R060 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Nubp1Q9R060 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.77□□□□□ -1.97
Nubp1Q9R060 Gm25044-201ENSMUST00000158603 104 ntBASIC2.77□□□□□ -1.97
Nubp1Q9R060 Gm22664-201ENSMUST00000158719 105 ntBASIC2.77□□□□□ -1.97
Nubp1Q9R060 Mir5127-201ENSMUST00000175295 71 ntBASIC2.77□□□□□ -1.97
Nubp1Q9R060 Gm24350-202ENSMUST00000198309 132 ntBASIC2.77□□□□□ -1.97
Nubp1Q9R060 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
Nubp1Q9R060 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Nubp1Q9R060 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Nubp1Q9R060 Mir344c-201ENSMUST00000103919 92 ntBASIC2.76□□□□□ -1.97
Nubp1Q9R060 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.76□□□□□ -1.97
Nubp1Q9R060 Gm26369-201ENSMUST00000157825 100 ntBASIC2.76□□□□□ -1.97
Nubp1Q9R060 Gm26398-201ENSMUST00000179015 127 ntBASIC2.76□□□□□ -1.97
Nubp1Q9R060 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
Nubp1Q9R060 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Nubp1Q9R060 Gm22540-201ENSMUST00000158168 117 ntBASIC2.75□□□□□ -1.97
Nubp1Q9R060 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC2.75□□□□□ -1.97
Nubp1Q9R060 Gm18486-201ENSMUST00000184040 298 ntBASIC2.75□□□□□ -1.97
Nubp1Q9R060 Mir6405-201ENSMUST00000184584 124 ntBASIC2.75□□□□□ -1.97
Nubp1Q9R060 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Nubp1Q9R060 Gm24805-201ENSMUST00000082931 104 ntBASIC2.75□□□□□ -1.97
Nubp1Q9R060 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Nubp1Q9R060 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Nubp1Q9R060 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm14588-201ENSMUST00000119895 172 ntBASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm23065-201ENSMUST00000158236 130 ntBASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm24946-201ENSMUST00000158332 106 ntBASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm23268-201ENSMUST00000175494 78 ntBASIC2.74□□□□□ -1.97
Nubp1Q9R060 Mir6419-201ENSMUST00000184784 113 ntBASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.74□□□□□ -1.97
Nubp1Q9R060 Mir151-201ENSMUST00000083678 68 ntBASIC2.74□□□□□ -1.97
Nubp1Q9R060 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Nubp1Q9R060 Gm22322-201ENSMUST00000157151 111 ntBASIC2.73□□□□□ -1.97
Nubp1Q9R060 Gm16539-201ENSMUST00000160086 327 ntBASIC2.73□□□□□ -1.97
Nubp1Q9R060 Gm43521-201ENSMUST00000197838 255 ntBASIC2.73□□□□□ -1.97
Nubp1Q9R060 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Nubp1Q9R060 Gm43107-201ENSMUST00000198729 255 ntBASIC2.73□□□□□ -1.97
Nubp1Q9R060 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.73□□□□□ -1.97
Nubp1Q9R060 Gm25038-201ENSMUST00000082928 130 ntBASIC2.73□□□□□ -1.97
Nubp1Q9R060 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Nubp1Q9R060 Mir20b-201ENSMUST00000102087 80 ntBASIC2.72□□□□□ -1.97
Nubp1Q9R060 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Nubp1Q9R060 Gm25838-201ENSMUST00000158920 120 ntBASIC2.72□□□□□ -1.97
Nubp1Q9R060 Gm27893-201ENSMUST00000184408 194 ntBASIC2.72□□□□□ -1.97
Nubp1Q9R060 Gm20118-201ENSMUST00000187207 162 ntBASIC2.72□□□□□ -1.97
Nubp1Q9R060 Mir221-201ENSMUST00000083488 95 ntBASIC2.72□□□□□ -1.97
Nubp1Q9R060 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Nubp1Q9R060 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Nubp1Q9R060 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
Nubp1Q9R060 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Nubp1Q9R060 Gm26423-201ENSMUST00000104277 128 ntBASIC2.71□□□□□ -1.98
Nubp1Q9R060 Mir30f-201ENSMUST00000196073 92 ntBASIC2.71□□□□□ -1.98
Nubp1Q9R060 Gm26441-201ENSMUST00000082590 104 ntBASIC2.71□□□□□ -1.98
Nubp1Q9R060 Gm23299-201ENSMUST00000082708 79 ntBASIC2.71□□□□□ -1.98
Nubp1Q9R060 Snord7-201ENSMUST00000083781 97 ntBASIC2.71□□□□□ -1.98
Nubp1Q9R060 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.71□□□□□ -1.98
Nubp1Q9R060 AC158979.1-201ENSMUST00000223594 2252 ntBASIC2.71□□□□□ -1.98
Nubp1Q9R060 Gm7209-201ENSMUST00000122339 333 ntBASIC2.7□□□□□ -1.98
Nubp1Q9R060 Gm22722-201ENSMUST00000157467 132 ntBASIC2.7□□□□□ -1.98
Nubp1Q9R060 Gm22833-201ENSMUST00000158292 132 ntBASIC2.7□□□□□ -1.98
Nubp1Q9R060 Gm22532-201ENSMUST00000158822 140 ntBASIC2.7□□□□□ -1.98
Nubp1Q9R060 Gm22858-201ENSMUST00000174972 76 ntBASIC2.7□□□□□ -1.98
Nubp1Q9R060 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Nubp1Q9R060 Mir542-201ENSMUST00000102186 85 ntBASIC2.69□□□□□ -1.98
Nubp1Q9R060 Mir764-201ENSMUST00000103259 108 ntBASIC2.69□□□□□ -1.98
Nubp1Q9R060 Gm24593-201ENSMUST00000122507 106 ntBASIC2.69□□□□□ -1.98
Nubp1Q9R060 Mir1949-201ENSMUST00000157434 141 ntBASIC2.69□□□□□ -1.98
Nubp1Q9R060 Gm23917-201ENSMUST00000175256 98 ntBASIC2.69□□□□□ -1.98
Nubp1Q9R060 Gm24366-201ENSMUST00000175383 86 ntBASIC2.69□□□□□ -1.98
Nubp1Q9R060 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.68□□□□□ -1.98
Nubp1Q9R060 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.68□□□□□ -1.98
Nubp1Q9R060 Mir654-201ENSMUST00000104787 84 ntBASIC2.68□□□□□ -1.98
Nubp1Q9R060 Gm23671-201ENSMUST00000157472 103 ntBASIC2.68□□□□□ -1.98
Nubp1Q9R060 Gm22099-201ENSMUST00000157925 123 ntBASIC2.68□□□□□ -1.98
Nubp1Q9R060 Gm25994-201ENSMUST00000175392 101 ntBASIC2.68□□□□□ -1.98
Nubp1Q9R060 Gm44526-201ENSMUST00000204664 121 ntBASIC2.68□□□□□ -1.98
Nubp1Q9R060 AC141438.3-201ENSMUST00000215632 202 ntBASIC2.68□□□□□ -1.98
Nubp1Q9R060 mt-Tn-201ENSMUST00000082399 71 ntBASIC2.68□□□□□ -1.98
Nubp1Q9R060 Snora24-201ENSMUST00000174989 130 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 222.6 ms