Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.83□□□□□ -2.28
Col4a4Q9QZR9 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.83□□□□□ -2.28
Col4a4Q9QZR9 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.83□□□□□ -2.28
Col4a4Q9QZR9 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.83□□□□□ -2.28
Col4a4Q9QZR9 Gm26225-201ENSMUST00000082508 135 ntBASIC0.83□□□□□ -2.28
Col4a4Q9QZR9 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.83□□□□□ -2.28
Col4a4Q9QZR9 Gm6952-201ENSMUST00000118629 159 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 Gm6025-201ENSMUST00000121517 201 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 Gm24595-201ENSMUST00000122501 110 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 Gm24668-201ENSMUST00000158935 104 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 Gm23090-201ENSMUST00000177331 78 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 Gm27585-201ENSMUST00000183717 199 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 Gm27977-201ENSMUST00000185159 111 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 Gm25895-201ENSMUST00000083714 100 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.82□□□□□ -2.28
Col4a4Q9QZR9 Gm22163-201ENSMUST00000158408 135 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm29613-201ENSMUST00000185846 313 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm28409-201ENSMUST00000187064 103 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm29544-201ENSMUST00000188860 313 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm28912-201ENSMUST00000189001 234 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm28808-201ENSMUST00000190978 313 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm35736-201ENSMUST00000203681 313 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm22279-201ENSMUST00000157200 93 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Mir1931-201ENSMUST00000158589 119 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm22663-201ENSMUST00000158721 102 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Mir6904-201ENSMUST00000183443 67 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm28537-201ENSMUST00000189026 315 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm29631-201ENSMUST00000191065 315 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm23370-201ENSMUST00000199545 130 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm44057-201ENSMUST00000204547 96 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm19790-201ENSMUST00000214414 251 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm22421-201ENSMUST00000083058 107 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Snora3-201ENSMUST00000083082 132 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Mir302d-201ENSMUST00000083513 66 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Mir101a-201ENSMUST00000083517 83 ntBASIC0.81□□□□□ -2.28
Col4a4Q9QZR9 Gm15069-201ENSMUST00000117792 192 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm15068-201ENSMUST00000119796 192 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm23655-201ENSMUST00000122627 105 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm25985-201ENSMUST00000122677 107 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm22337-201ENSMUST00000157721 132 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm22557-201ENSMUST00000157804 102 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm25654-201ENSMUST00000158467 88 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm24106-201ENSMUST00000175498 127 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm27672-201ENSMUST00000183751 204 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm43563-201ENSMUST00000196761 198 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.8□□□□□ -2.28
Col4a4Q9QZR9 Gm14536-201ENSMUST00000118324 138 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm16032-201ENSMUST00000118534 168 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm15027-201ENSMUST00000120922 138 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm25599-201ENSMUST00000157816 103 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm22387-201ENSMUST00000158191 131 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm25015-201ENSMUST00000158400 128 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm22944-201ENSMUST00000158662 133 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm16399-201ENSMUST00000181423 219 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm29308-201ENSMUST00000188863 315 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm25128-201ENSMUST00000083339 76 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.79□□□□□ -2.28
Col4a4Q9QZR9 Gm24171-201ENSMUST00000104126 131 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm25878-201ENSMUST00000104327 93 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm24375-201ENSMUST00000104397 132 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm22559-201ENSMUST00000157329 134 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm23390-201ENSMUST00000157393 106 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm25424-201ENSMUST00000157612 58 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm23898-201ENSMUST00000158111 103 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm23209-201ENSMUST00000158667 110 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm26160-201ENSMUST00000158965 63 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm38364-201ENSMUST00000191814 179 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm34139-201ENSMUST00000196166 294 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm42988-201ENSMUST00000198116 225 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm43944-201ENSMUST00000205220 120 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm23678-201ENSMUST00000083157 107 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm22738-201ENSMUST00000083440 147 ntBASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Col4a4Q9QZR9 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
Col4a4Q9QZR9 Gm14039-201ENSMUST00000118705 101 ntBASIC0.78□□□□□ -2.29
Col4a4Q9QZR9 Gm22286-201ENSMUST00000179708 107 ntBASIC0.78□□□□□ -2.29
Col4a4Q9QZR9 Gm27980-201ENSMUST00000184094 169 ntBASIC0.78□□□□□ -2.29
Col4a4Q9QZR9 Gm25081-201ENSMUST00000082534 108 ntBASIC0.78□□□□□ -2.29
Col4a4Q9QZR9 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Col4a4Q9QZR9 Gm23578-201ENSMUST00000103943 104 ntBASIC0.77□□□□□ -2.29
Col4a4Q9QZR9 Gm13246-201ENSMUST00000120994 315 ntBASIC0.77□□□□□ -2.29
Col4a4Q9QZR9 Gm25828-201ENSMUST00000157087 95 ntBASIC0.77□□□□□ -2.29
Col4a4Q9QZR9 Gm24476-201ENSMUST00000157437 131 ntBASIC0.77□□□□□ -2.29
Col4a4Q9QZR9 Gm22850-201ENSMUST00000157714 82 ntBASIC0.77□□□□□ -2.29
Col4a4Q9QZR9 Gm23080-201ENSMUST00000157846 103 ntBASIC0.77□□□□□ -2.29
Col4a4Q9QZR9 Gm25494-201ENSMUST00000158143 100 ntBASIC0.77□□□□□ -2.29
Col4a4Q9QZR9 Gm22088-201ENSMUST00000158341 117 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 182.3 ms