Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm26426-201ENSMUST00000177866 123 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm26060-201ENSMUST00000180094 123 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm14598-201ENSMUST00000180109 468 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm14625-201ENSMUST00000180231 468 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm44976-201ENSMUST00000205543 261 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm18188-201ENSMUST00000219386 478 ntBASIC1.01□□□□□ -2.25
Cpsf3Q9QXK7 Gm25506-201ENSMUST00000104339 70 ntBASIC1□□□□□ -2.25
Cpsf3Q9QXK7 Gm26301-201ENSMUST00000104813 95 ntBASIC1□□□□□ -2.25
Cpsf3Q9QXK7 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1□□□□□ -2.25
Cpsf3Q9QXK7 Gm20118-201ENSMUST00000187207 162 ntBASIC1□□□□□ -2.25
Cpsf3Q9QXK7 Mir468-201ENSMUST00000197332 78 ntBASIC1□□□□□ -2.25
Cpsf3Q9QXK7 Gm19790-201ENSMUST00000214414 251 ntBASIC1□□□□□ -2.25
Cpsf3Q9QXK7 n-R5s87-201ENSMUST00000122752 116 ntBASIC0.99□□□□□ -2.25
Cpsf3Q9QXK7 Gm23901-201ENSMUST00000157570 107 ntBASIC0.99□□□□□ -2.25
Cpsf3Q9QXK7 Mir1954-201ENSMUST00000175595 86 ntBASIC0.99□□□□□ -2.25
Cpsf3Q9QXK7 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.99□□□□□ -2.25
Cpsf3Q9QXK7 Gm22809-201ENSMUST00000082743 156 ntBASIC0.99□□□□□ -2.25
Cpsf3Q9QXK7 Mir27b-201ENSMUST00000083541 73 ntBASIC0.99□□□□□ -2.25
Cpsf3Q9QXK7 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.99□□□□□ -2.25
Cpsf3Q9QXK7 Gm23130-201ENSMUST00000104252 74 ntBASIC0.98□□□□□ -2.25
Cpsf3Q9QXK7 Gm13922-201ENSMUST00000119505 156 ntBASIC0.98□□□□□ -2.25
Cpsf3Q9QXK7 Gm25011-201ENSMUST00000158398 126 ntBASIC0.98□□□□□ -2.25
Cpsf3Q9QXK7 Gm22425-201ENSMUST00000158532 138 ntBASIC0.98□□□□□ -2.25
Cpsf3Q9QXK7 Gm27672-201ENSMUST00000183751 204 ntBASIC0.98□□□□□ -2.25
Cpsf3Q9QXK7 Gm18213-201ENSMUST00000207850 178 ntBASIC0.98□□□□□ -2.25
Cpsf3Q9QXK7 Gm25482-201ENSMUST00000083225 107 ntBASIC0.98□□□□□ -2.25
Cpsf3Q9QXK7 Mir186-201ENSMUST00000083497 71 ntBASIC0.98□□□□□ -2.25
Cpsf3Q9QXK7 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.98□□□□□ -2.25
Cpsf3Q9QXK7 Gm22515-201ENSMUST00000158273 305 ntBASIC0.97□□□□□ -2.25
Cpsf3Q9QXK7 Gm25166-201ENSMUST00000158909 111 ntBASIC0.97□□□□□ -2.25
Cpsf3Q9QXK7 Gm38364-201ENSMUST00000191814 179 ntBASIC0.97□□□□□ -2.25
Cpsf3Q9QXK7 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Cpsf3Q9QXK7 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.97□□□□□ -2.25
Cpsf3Q9QXK7 Mir410-201ENSMUST00000083563 81 ntBASIC0.97□□□□□ -2.25
Cpsf3Q9QXK7 Snord35a-201ENSMUST00000083884 90 ntBASIC0.97□□□□□ -2.25
Cpsf3Q9QXK7 Gm25683-201ENSMUST00000083940 131 ntBASIC0.97□□□□□ -2.25
Cpsf3Q9QXK7 Gm23766-201ENSMUST00000103894 80 ntBASIC0.96□□□□□ -2.26
Cpsf3Q9QXK7 Gm25044-201ENSMUST00000158603 104 ntBASIC0.96□□□□□ -2.26
Cpsf3Q9QXK7 AC134601.1-201ENSMUST00000221058 109 ntBASIC0.96□□□□□ -2.26
Cpsf3Q9QXK7 Gm24311-201ENSMUST00000082570 104 ntBASIC0.96□□□□□ -2.26
Cpsf3Q9QXK7 Snord82-201ENSMUST00000082889 70 ntBASIC0.96□□□□□ -2.26
Cpsf3Q9QXK7 Gm24132-201ENSMUST00000104745 91 ntBASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Snord100-201ENSMUST00000116836 74 ntBASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Gm6952-201ENSMUST00000118629 159 ntBASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Gm25771-201ENSMUST00000158565 144 ntBASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Mir1961-201ENSMUST00000158643 112 ntBASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Gm27974-201ENSMUST00000183415 105 ntBASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Gm44948-201ENSMUST00000209050 149 ntBASIC0.95□□□□□ -2.26
Cpsf3Q9QXK7 Gm24640-201ENSMUST00000116949 126 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm22626-201ENSMUST00000116990 126 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm14567-201ENSMUST00000117155 174 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm12771-201ENSMUST00000120246 135 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm13345-201ENSMUST00000121928 228 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm24761-201ENSMUST00000179589 127 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm24488-201ENSMUST00000179934 127 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm25701-201ENSMUST00000179988 127 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm26431-201ENSMUST00000180199 127 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm27587-201ENSMUST00000185116 163 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm26326-201ENSMUST00000083070 129 ntBASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Cpsf3Q9QXK7 Gm23893-201ENSMUST00000158106 134 ntBASIC0.93□□□□□ -2.26
Cpsf3Q9QXK7 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Cpsf3Q9QXK7 Gm24020-201ENSMUST00000180156 108 ntBASIC0.93□□□□□ -2.26
Cpsf3Q9QXK7 Gm38274-201ENSMUST00000195689 148 ntBASIC0.93□□□□□ -2.26
Cpsf3Q9QXK7 Gm24276-201ENSMUST00000102181 110 ntBASIC0.92□□□□□ -2.26
Cpsf3Q9QXK7 Gm26076-201ENSMUST00000104065 105 ntBASIC0.92□□□□□ -2.26
Cpsf3Q9QXK7 Gm24401-201ENSMUST00000157868 91 ntBASIC0.92□□□□□ -2.26
Cpsf3Q9QXK7 Gm37586-201ENSMUST00000193654 204 ntBASIC0.92□□□□□ -2.26
Cpsf3Q9QXK7 Gm42533-201ENSMUST00000196247 157 ntBASIC0.92□□□□□ -2.26
Cpsf3Q9QXK7 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.92□□□□□ -2.26
Cpsf3Q9QXK7 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.92□□□□□ -2.26
Cpsf3Q9QXK7 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Cpsf3Q9QXK7 Mir547-201ENSMUST00000102051 78 ntBASIC0.91□□□□□ -2.26
Cpsf3Q9QXK7 Gm23375-201ENSMUST00000175407 83 ntBASIC0.91□□□□□ -2.26
Cpsf3Q9QXK7 Gm45002-201ENSMUST00000208045 120 ntBASIC0.9□□□□□ -2.27
Cpsf3Q9QXK7 AC192091.2-201ENSMUST00000217869 117 ntBASIC0.9□□□□□ -2.27
Cpsf3Q9QXK7 Mir33-201ENSMUST00000083531 69 ntBASIC0.9□□□□□ -2.27
Cpsf3Q9QXK7 Mir324-201ENSMUST00000083600 89 ntBASIC0.9□□□□□ -2.27
Cpsf3Q9QXK7 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Cpsf3Q9QXK7 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Cpsf3Q9QXK7 Gm22790-201ENSMUST00000157229 129 ntBASIC0.89□□□□□ -2.27
Cpsf3Q9QXK7 Gm22850-201ENSMUST00000157714 82 ntBASIC0.89□□□□□ -2.27
Cpsf3Q9QXK7 Gm26468-201ENSMUST00000158644 106 ntBASIC0.89□□□□□ -2.27
Cpsf3Q9QXK7 Gm22259-201ENSMUST00000178926 107 ntBASIC0.89□□□□□ -2.27
Cpsf3Q9QXK7 Gm27656-201ENSMUST00000185055 80 ntBASIC0.89□□□□□ -2.27
Cpsf3Q9QXK7 Gm44301-201ENSMUST00000200362 143 ntBASIC0.88□□□□□ -2.27
Cpsf3Q9QXK7 Gm23763-201ENSMUST00000158345 60 ntBASIC0.87□□□□□ -2.27
Cpsf3Q9QXK7 Gm25976-201ENSMUST00000158695 130 ntBASIC0.87□□□□□ -2.27
Cpsf3Q9QXK7 Gm23567-201ENSMUST00000178005 107 ntBASIC0.87□□□□□ -2.27
Cpsf3Q9QXK7 Mir1a-2-201ENSMUST00000198520 72 ntBASIC0.87□□□□□ -2.27
Cpsf3Q9QXK7 Mir721-201ENSMUST00000200230 88 ntBASIC0.87□□□□□ -2.27
Cpsf3Q9QXK7 Gm25588-201ENSMUST00000082501 140 ntBASIC0.87□□□□□ -2.27
Cpsf3Q9QXK7 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.86□□□□□ -2.27
Cpsf3Q9QXK7 Gm23340-201ENSMUST00000158955 123 ntBASIC0.86□□□□□ -2.27
Cpsf3Q9QXK7 Mir7039-201ENSMUST00000183852 85 ntBASIC0.86□□□□□ -2.27
Cpsf3Q9QXK7 Mir6905-201ENSMUST00000184228 70 ntBASIC0.86□□□□□ -2.27
Cpsf3Q9QXK7 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.86□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms