Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.33□□□□□ -2.36
Cdc40Q9DC48 Gm26326-201ENSMUST00000083070 129 ntBASIC0.33□□□□□ -2.36
Cdc40Q9DC48 Gm24171-201ENSMUST00000104126 131 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm11904-201ENSMUST00000120562 248 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm24635-201ENSMUST00000122712 128 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm24288-201ENSMUST00000157630 144 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm23838-201ENSMUST00000158067 162 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm22387-201ENSMUST00000158191 131 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm23853-201ENSMUST00000158375 104 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm26402-201ENSMUST00000158499 113 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm23375-201ENSMUST00000175407 83 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm23416-201ENSMUST00000175520 95 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm25235-201ENSMUST00000179933 107 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm26447-201ENSMUST00000082448 129 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm25634-201ENSMUST00000082667 105 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Gm24445-201ENSMUST00000083981 107 ntBASIC0.32□□□□□ -2.36
Cdc40Q9DC48 Snord69-201ENSMUST00000104024 80 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Mir1197-201ENSMUST00000117037 120 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Gm15069-201ENSMUST00000117792 192 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Gm15068-201ENSMUST00000119796 192 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Gm6985-201ENSMUST00000121255 271 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Gm13797-201ENSMUST00000121792 120 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Gm22491-201ENSMUST00000157190 102 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Gm22887-201ENSMUST00000178586 107 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Gm8219-201ENSMUST00000218309 242 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Gm23345-201ENSMUST00000083817 150 ntBASIC0.31□□□□□ -2.36
Cdc40Q9DC48 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Gm24423-201ENSMUST00000101982 106 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Gm23655-201ENSMUST00000122627 105 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Gm24476-201ENSMUST00000157437 131 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Gm24547-201ENSMUST00000158649 149 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Mir6336-201ENSMUST00000183581 130 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Mir7077-201ENSMUST00000183991 57 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Mir6896-201ENSMUST00000198033 73 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.3□□□□□ -2.36
Cdc40Q9DC48 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Gm24208-201ENSMUST00000082783 135 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Gm24527-201ENSMUST00000082920 107 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Mir224-201ENSMUST00000083608 82 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Mir532-201ENSMUST00000093630 96 ntBASIC0.3□□□□□ -2.36
Cdc40Q9DC48 Gm23708-201ENSMUST00000104367 123 ntBASIC0.29□□□□□ -2.36
Cdc40Q9DC48 Gm15289-201ENSMUST00000117793 244 ntBASIC0.29□□□□□ -2.36
Cdc40Q9DC48 Gm14906-201ENSMUST00000119265 390 ntBASIC0.29□□□□□ -2.36
Cdc40Q9DC48 Gm24963-201ENSMUST00000157916 144 ntBASIC0.29□□□□□ -2.36
Cdc40Q9DC48 Gm23002-201ENSMUST00000179221 107 ntBASIC0.29□□□□□ -2.36
Cdc40Q9DC48 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.29□□□□□ -2.36
Cdc40Q9DC48 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.29□□□□□ -2.36
Cdc40Q9DC48 Gm12771-201ENSMUST00000120246 135 ntBASIC0.28□□□□□ -2.36
Cdc40Q9DC48 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Cdc40Q9DC48 Gm22983-201ENSMUST00000158308 104 ntBASIC0.28□□□□□ -2.36
Cdc40Q9DC48 Gm26116-201ENSMUST00000175600 77 ntBASIC0.28□□□□□ -2.36
Cdc40Q9DC48 Gm29107-201ENSMUST00000190910 347 ntBASIC0.28□□□□□ -2.36
Cdc40Q9DC48 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.28□□□□□ -2.36
Cdc40Q9DC48 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.28□□□□□ -2.36
Cdc40Q9DC48 Gm24764-201ENSMUST00000083686 199 ntBASIC0.28□□□□□ -2.36
Cdc40Q9DC48 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.28□□□□□ -2.36
Cdc40Q9DC48 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Cdc40Q9DC48 Gm14792-201ENSMUST00000119725 258 ntBASIC0.27□□□□□ -2.37
Cdc40Q9DC48 Gm23466-201ENSMUST00000157133 106 ntBASIC0.27□□□□□ -2.37
Cdc40Q9DC48 Gm22767-201ENSMUST00000158365 165 ntBASIC0.27□□□□□ -2.37
Cdc40Q9DC48 Gm28016-201ENSMUST00000184594 196 ntBASIC0.27□□□□□ -2.37
Cdc40Q9DC48 Gm27747-201ENSMUST00000184707 85 ntBASIC0.27□□□□□ -2.37
Cdc40Q9DC48 Gm45541-201ENSMUST00000210443 54 ntBASIC0.27□□□□□ -2.37
Cdc40Q9DC48 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.27□□□□□ -2.37
Cdc40Q9DC48 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Cdc40Q9DC48 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.26□□□□□ -2.37
Cdc40Q9DC48 Gm24509-201ENSMUST00000157086 101 ntBASIC0.26□□□□□ -2.37
Cdc40Q9DC48 Gm25358-201ENSMUST00000157189 101 ntBASIC0.26□□□□□ -2.37
Cdc40Q9DC48 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.26□□□□□ -2.37
Cdc40Q9DC48 Gm24762-201ENSMUST00000083689 104 ntBASIC0.26□□□□□ -2.37
Cdc40Q9DC48 Gm10222-201ENSMUST00000088336 294 ntBASIC0.26□□□□□ -2.37
Cdc40Q9DC48 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Cdc40Q9DC48 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.25□□□□□ -2.37
Cdc40Q9DC48 Gm24594-201ENSMUST00000122502 99 ntBASIC0.25□□□□□ -2.37
Cdc40Q9DC48 Gm22520-201ENSMUST00000158269 129 ntBASIC0.25□□□□□ -2.37
Cdc40Q9DC48 Gm23579-201ENSMUST00000158528 103 ntBASIC0.25□□□□□ -2.37
Cdc40Q9DC48 Gm27585-201ENSMUST00000183717 199 ntBASIC0.25□□□□□ -2.37
Cdc40Q9DC48 Gm37715-201ENSMUST00000193206 235 ntBASIC0.25□□□□□ -2.37
Cdc40Q9DC48 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.25□□□□□ -2.37
Cdc40Q9DC48 Mir30a-201ENSMUST00000083471 71 ntBASIC0.25□□□□□ -2.37
Cdc40Q9DC48 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.25□□□□□ -2.37
Cdc40Q9DC48 Mir146-201ENSMUST00000083667 65 ntBASIC0.25□□□□□ -2.37
Cdc40Q9DC48 Mir710-201ENSMUST00000102088 110 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm25323-201ENSMUST00000122555 103 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm23219-201ENSMUST00000158123 87 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm23581-201ENSMUST00000158531 63 ntBASIC0.24□□□□□ -2.37
Cdc40Q9DC48 Gm25771-201ENSMUST00000158565 144 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 397.6 ms