Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm22780-201ENSMUST00000104084 132 ntBASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Gm22914-201ENSMUST00000175195 77 ntBASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Gm25285-201ENSMUST00000178951 90 ntBASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Gm25820-201ENSMUST00000198589 127 ntBASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.05□□□□□ -2.24
Ddx28Q9CWT6 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.05□□□□□ -2.24
Ddx28Q9CWT6 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.05□□□□□ -2.24
Ddx28Q9CWT6 Gm22557-201ENSMUST00000157804 102 ntBASIC1.05□□□□□ -2.24
Ddx28Q9CWT6 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.05□□□□□ -2.24
Ddx28Q9CWT6 Gm45268-201ENSMUST00000210046 370 ntBASIC1.05□□□□□ -2.24
Ddx28Q9CWT6 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.05□□□□□ -2.24
Ddx28Q9CWT6 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Ddx28Q9CWT6 Gm25985-201ENSMUST00000122677 107 ntBASIC1.04□□□□□ -2.24
Ddx28Q9CWT6 Gm22989-201ENSMUST00000158313 86 ntBASIC1.04□□□□□ -2.24
Ddx28Q9CWT6 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Ddx28Q9CWT6 Gm18188-201ENSMUST00000219386 478 ntBASIC1.04□□□□□ -2.24
Ddx28Q9CWT6 Gm25683-201ENSMUST00000083940 131 ntBASIC1.04□□□□□ -2.24
Ddx28Q9CWT6 Gm24374-201ENSMUST00000104394 106 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm22233-201ENSMUST00000157464 114 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm25868-201ENSMUST00000158253 114 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm25771-201ENSMUST00000158565 144 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm26029-201ENSMUST00000158659 132 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm26360-201ENSMUST00000158872 103 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm44396-201ENSMUST00000199843 114 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm44976-201ENSMUST00000205543 261 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm22809-201ENSMUST00000082743 156 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm22738-201ENSMUST00000083440 147 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.03□□□□□ -2.24
Ddx28Q9CWT6 Gm26082-201ENSMUST00000104070 127 ntBASIC1.02□□□□□ -2.25
Ddx28Q9CWT6 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.02□□□□□ -2.25
Ddx28Q9CWT6 Gm23636-201ENSMUST00000175070 95 ntBASIC1.02□□□□□ -2.25
Ddx28Q9CWT6 Gm24154-201ENSMUST00000175261 130 ntBASIC1.02□□□□□ -2.25
Ddx28Q9CWT6 Gm25851-201ENSMUST00000082794 107 ntBASIC1.02□□□□□ -2.25
Ddx28Q9CWT6 Gm24271-201ENSMUST00000102327 111 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm25316-201ENSMUST00000116826 118 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm23329-201ENSMUST00000157415 108 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm25882-201ENSMUST00000157784 85 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm25044-201ENSMUST00000158603 104 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm25069-201ENSMUST00000175238 86 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm23567-201ENSMUST00000178005 107 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Mir6240-201ENSMUST00000184281 117 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm37624-201ENSMUST00000193751 219 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm37116-201ENSMUST00000195161 147 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Snord80-202ENSMUST00000199023 77 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm43898-201ENSMUST00000204456 424 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm25588-201ENSMUST00000082501 140 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm26326-201ENSMUST00000083070 129 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm24252-201ENSMUST00000083700 132 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Mir489-201ENSMUST00000093599 107 ntBASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Ddx28Q9CWT6 Gm26076-201ENSMUST00000104065 105 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Mir466h-201ENSMUST00000104748 81 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Gm26089-201ENSMUST00000157898 107 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Gm23375-201ENSMUST00000175407 83 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Mir7059-201ENSMUST00000184825 59 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Gm37997-201ENSMUST00000193515 267 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Mir468-201ENSMUST00000197332 78 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Snora41-201ENSMUST00000082668 132 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Gm24457-201ENSMUST00000083196 105 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Mir410-201ENSMUST00000083563 81 ntBASIC1□□□□□ -2.25
Ddx28Q9CWT6 Gm22790-201ENSMUST00000157229 129 ntBASIC0.99□□□□□ -2.25
Ddx28Q9CWT6 Gm22612-201ENSMUST00000158293 101 ntBASIC0.99□□□□□ -2.25
Ddx28Q9CWT6 Gm22425-201ENSMUST00000158532 138 ntBASIC0.99□□□□□ -2.25
Ddx28Q9CWT6 Gm23864-201ENSMUST00000177607 107 ntBASIC0.99□□□□□ -2.25
Ddx28Q9CWT6 Gm27419-201ENSMUST00000184576 109 ntBASIC0.99□□□□□ -2.25
Ddx28Q9CWT6 Gm23328-201ENSMUST00000157418 132 ntBASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 Gm25011-201ENSMUST00000158398 126 ntBASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 Gm25768-201ENSMUST00000158570 98 ntBASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 Gm25241-201ENSMUST00000174909 84 ntBASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 Gm26217-201ENSMUST00000175212 84 ntBASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 Mir6381-201ENSMUST00000183426 87 ntBASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Ddx28Q9CWT6 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 Gm22148-201ENSMUST00000104445 107 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 Gm22999-201ENSMUST00000157082 88 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 Gm23080-201ENSMUST00000157846 103 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 Gm22515-201ENSMUST00000158273 305 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 Gm25769-201ENSMUST00000158569 127 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 Gm25364-201ENSMUST00000158851 107 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 AC153646.2-201ENSMUST00000220516 109 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.97□□□□□ -2.25
Ddx28Q9CWT6 Gm23130-201ENSMUST00000104252 74 ntBASIC0.96□□□□□ -2.26
Ddx28Q9CWT6 Gm26420-201ENSMUST00000104273 103 ntBASIC0.96□□□□□ -2.26
Ddx28Q9CWT6 Mir1961-201ENSMUST00000158643 112 ntBASIC0.96□□□□□ -2.26
Ddx28Q9CWT6 Gm24221-201ENSMUST00000158833 313 ntBASIC0.96□□□□□ -2.26
Ddx28Q9CWT6 Mir8119-201ENSMUST00000183371 129 ntBASIC0.96□□□□□ -2.26
Ddx28Q9CWT6 Gm27894-201ENSMUST00000184177 92 ntBASIC0.96□□□□□ -2.26
Ddx28Q9CWT6 Gm20118-201ENSMUST00000187207 162 ntBASIC0.96□□□□□ -2.26
Ddx28Q9CWT6 Gm18213-201ENSMUST00000207850 178 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 201.6 ms