Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm12686-201ENSMUST00000120546 397 ntBASIC0.82□□□□□ -2.28
Smc1aQ9CU62 Gm12815-201ENSMUST00000121737 135 ntBASIC0.82□□□□□ -2.28
Smc1aQ9CU62 Gm22387-201ENSMUST00000158191 131 ntBASIC0.82□□□□□ -2.28
Smc1aQ9CU62 Mir468-201ENSMUST00000197332 78 ntBASIC0.82□□□□□ -2.28
Smc1aQ9CU62 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.82□□□□□ -2.28
Smc1aQ9CU62 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Smc1aQ9CU62 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Smc1aQ9CU62 Mir451a-201ENSMUST00000093557 72 ntBASIC0.82□□□□□ -2.28
Smc1aQ9CU62 Gm6897-201ENSMUST00000117714 138 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Gm14758-201ENSMUST00000119104 138 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Gm24559-201ENSMUST00000157519 121 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Gm22767-201ENSMUST00000158365 165 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Gm20630-201ENSMUST00000177387 551 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Gm23047-201ENSMUST00000177661 94 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Mir7079-201ENSMUST00000184697 69 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Gm6003-201ENSMUST00000187903 463 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Gm22809-201ENSMUST00000082743 156 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Gm24762-201ENSMUST00000083689 104 ntBASIC0.81□□□□□ -2.28
Smc1aQ9CU62 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Smc1aQ9CU62 Gm25323-201ENSMUST00000122555 103 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Gm25828-201ENSMUST00000157087 95 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Gm23783-201ENSMUST00000157941 102 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Gm22433-201ENSMUST00000158550 142 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Gm25718-201ENSMUST00000158632 118 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Gm16539-201ENSMUST00000160086 327 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Gm22951-201ENSMUST00000179471 107 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Gm44464-201ENSMUST00000198010 138 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Gm44989-201ENSMUST00000204749 217 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Gm44976-201ENSMUST00000205543 261 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Mir324-201ENSMUST00000083600 89 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Mir362-201ENSMUST00000093592 65 ntBASIC0.8□□□□□ -2.28
Smc1aQ9CU62 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Smc1aQ9CU62 Gm23321-201ENSMUST00000104465 126 ntBASIC0.79□□□□□ -2.28
Smc1aQ9CU62 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.79□□□□□ -2.28
Smc1aQ9CU62 Gm22145-201ENSMUST00000157396 148 ntBASIC0.79□□□□□ -2.28
Smc1aQ9CU62 Gm24747-201ENSMUST00000157835 87 ntBASIC0.79□□□□□ -2.28
Smc1aQ9CU62 Gm26090-201ENSMUST00000157897 128 ntBASIC0.79□□□□□ -2.28
Smc1aQ9CU62 Gm25015-201ENSMUST00000158400 128 ntBASIC0.79□□□□□ -2.28
Smc1aQ9CU62 Mir1961-201ENSMUST00000158643 112 ntBASIC0.79□□□□□ -2.28
Smc1aQ9CU62 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.79□□□□□ -2.28
Smc1aQ9CU62 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.79□□□□□ -2.28
Smc1aQ9CU62 Gm24121-201ENSMUST00000102029 106 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Gm23892-201ENSMUST00000158105 130 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Mir15a-201ENSMUST00000175266 84 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Mir6364-201ENSMUST00000183396 86 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Mir219b-201ENSMUST00000198317 65 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Gm44948-201ENSMUST00000209050 149 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Gm23735-201ENSMUST00000082551 134 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Gm24929-201ENSMUST00000083403 139 ntBASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Smc1aQ9CU62 Gm13922-201ENSMUST00000119505 156 ntBASIC0.77□□□□□ -2.29
Smc1aQ9CU62 Gm44462-201ENSMUST00000199696 129 ntBASIC0.77□□□□□ -2.29
Smc1aQ9CU62 Snord19-201ENSMUST00000104609 76 ntBASIC0.76□□□□□ -2.29
Smc1aQ9CU62 Gm25464-201ENSMUST00000175481 107 ntBASIC0.76□□□□□ -2.29
Smc1aQ9CU62 Gm16404-201ENSMUST00000177739 468 ntBASIC0.76□□□□□ -2.29
Smc1aQ9CU62 Gm14598-201ENSMUST00000180109 468 ntBASIC0.76□□□□□ -2.29
Smc1aQ9CU62 Gm14625-201ENSMUST00000180231 468 ntBASIC0.76□□□□□ -2.29
Smc1aQ9CU62 Gm44409-201ENSMUST00000198810 166 ntBASIC0.76□□□□□ -2.29
Smc1aQ9CU62 Gm23203-201ENSMUST00000104374 107 ntBASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Gm12771-201ENSMUST00000120246 135 ntBASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Gm25267-201ENSMUST00000158522 63 ntBASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Gm27476-201ENSMUST00000183366 104 ntBASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Gm27332-201ENSMUST00000184893 112 ntBASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Snord33-201ENSMUST00000083694 84 ntBASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.75□□□□□ -2.29
Smc1aQ9CU62 Gm37997-201ENSMUST00000193515 267 ntBASIC0.74□□□□□ -2.29
Smc1aQ9CU62 Mir547-201ENSMUST00000102051 78 ntBASIC0.73□□□□□ -2.29
Smc1aQ9CU62 Gm26279-201ENSMUST00000157095 102 ntBASIC0.73□□□□□ -2.29
Smc1aQ9CU62 Gm25654-201ENSMUST00000158467 88 ntBASIC0.73□□□□□ -2.29
Smc1aQ9CU62 Gm25161-201ENSMUST00000158913 132 ntBASIC0.73□□□□□ -2.29
Smc1aQ9CU62 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.73□□□□□ -2.29
Smc1aQ9CU62 Gm25749-201ENSMUST00000175485 111 ntBASIC0.73□□□□□ -2.29
Smc1aQ9CU62 Gm23141-201ENSMUST00000178682 94 ntBASIC0.73□□□□□ -2.29
Smc1aQ9CU62 Gm27672-201ENSMUST00000183751 204 ntBASIC0.73□□□□□ -2.29
Smc1aQ9CU62 Gm25895-201ENSMUST00000083714 100 ntBASIC0.73□□□□□ -2.29
Smc1aQ9CU62 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Smc1aQ9CU62 Mir669g-201ENSMUST00000116809 123 ntBASIC0.72□□□□□ -2.29
Smc1aQ9CU62 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.72□□□□□ -2.29
Smc1aQ9CU62 Gm25494-201ENSMUST00000158143 100 ntBASIC0.72□□□□□ -2.29
Smc1aQ9CU62 Gm16307-201ENSMUST00000161269 210 ntBASIC0.72□□□□□ -2.29
Smc1aQ9CU62 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.72□□□□□ -2.29
Smc1aQ9CU62 Gm22431-201ENSMUST00000158545 107 ntBASIC0.71□□□□□ -2.3
Smc1aQ9CU62 Gm23375-201ENSMUST00000175407 83 ntBASIC0.71□□□□□ -2.3
Smc1aQ9CU62 Gm28435-201ENSMUST00000185496 108 ntBASIC0.71□□□□□ -2.3
Smc1aQ9CU62 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.71□□□□□ -2.3
Smc1aQ9CU62 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Smc1aQ9CU62 Gm19790-201ENSMUST00000214414 251 ntBASIC0.71□□□□□ -2.3
Smc1aQ9CU62 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.71□□□□□ -2.3
Smc1aQ9CU62 Gm22744-201ENSMUST00000083444 65 ntBASIC0.71□□□□□ -2.3
Smc1aQ9CU62 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 157.8 ms