Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm24833-201ENSMUST00000116775 120 ntBASIC0.15□□□□□ -2.39
RTRAFQ9CQE8 Gm22051-201ENSMUST00000117002 127 ntBASIC0.15□□□□□ -2.39
RTRAFQ9CQE8 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.15□□□□□ -2.39
RTRAFQ9CQE8 Gm25494-201ENSMUST00000158143 100 ntBASIC0.15□□□□□ -2.39
RTRAFQ9CQE8 Gm17919-201ENSMUST00000173344 312 ntBASIC0.15□□□□□ -2.39
RTRAFQ9CQE8 Gm25241-201ENSMUST00000174909 84 ntBASIC0.15□□□□□ -2.39
RTRAFQ9CQE8 Gm26217-201ENSMUST00000175212 84 ntBASIC0.15□□□□□ -2.39
RTRAFQ9CQE8 Gm28016-201ENSMUST00000184594 196 ntBASIC0.15□□□□□ -2.39
RTRAFQ9CQE8 Gm23345-201ENSMUST00000083817 150 ntBASIC0.15□□□□□ -2.39
RTRAFQ9CQE8 Gm6003-201ENSMUST00000187903 463 ntBASIC0.14□□□□□ -2.39
RTRAFQ9CQE8 Gm44457-201ENSMUST00000198109 76 ntBASIC0.14□□□□□ -2.39
RTRAFQ9CQE8 Gm43944-201ENSMUST00000205220 120 ntBASIC0.14□□□□□ -2.39
RTRAFQ9CQE8 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.14□□□□□ -2.39
RTRAFQ9CQE8 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.14□□□□□ -2.39
RTRAFQ9CQE8 Mir181a-2-201ENSMUST00000083489 76 ntBASIC0.14□□□□□ -2.39
RTRAFQ9CQE8 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.13□□□□□ -2.39
RTRAFQ9CQE8 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.13□□□□□ -2.39
RTRAFQ9CQE8 Gm22216-201ENSMUST00000157557 114 ntBASIC0.13□□□□□ -2.39
RTRAFQ9CQE8 Gm23581-201ENSMUST00000158531 63 ntBASIC0.13□□□□□ -2.39
RTRAFQ9CQE8 Gm25300-201ENSMUST00000175284 84 ntBASIC0.13□□□□□ -2.39
RTRAFQ9CQE8 Gm27717-201ENSMUST00000183933 151 ntBASIC0.13□□□□□ -2.39
RTRAFQ9CQE8 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.13□□□□□ -2.39
RTRAFQ9CQE8 Mir146-201ENSMUST00000083667 65 ntBASIC0.13□□□□□ -2.39
RTRAFQ9CQE8 Gm6952-201ENSMUST00000118629 159 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Gm13345-201ENSMUST00000121928 228 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Gm11204-201ENSMUST00000122438 147 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Gm23579-201ENSMUST00000158528 103 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Gm25444-201ENSMUST00000158999 113 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Mir3108-201ENSMUST00000175500 79 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Gm27585-201ENSMUST00000183717 199 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Mir7229-201ENSMUST00000197062 53 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Gm24030-201ENSMUST00000083931 164 ntBASIC0.12□□□□□ -2.39
RTRAFQ9CQE8 Gm25848-201ENSMUST00000116790 144 ntBASIC0.11□□□□□ -2.39
RTRAFQ9CQE8 Scarna8-201ENSMUST00000158333 131 ntBASIC0.11□□□□□ -2.39
RTRAFQ9CQE8 Gm22434-201ENSMUST00000158549 122 ntBASIC0.11□□□□□ -2.39
RTRAFQ9CQE8 Gm25464-201ENSMUST00000175481 107 ntBASIC0.11□□□□□ -2.39
RTRAFQ9CQE8 Mir669k-201ENSMUST00000177742 127 ntBASIC0.11□□□□□ -2.39
RTRAFQ9CQE8 Gm25673-201ENSMUST00000179957 127 ntBASIC0.11□□□□□ -2.39
RTRAFQ9CQE8 Mir7010-201ENSMUST00000183464 63 ntBASIC0.11□□□□□ -2.39
RTRAFQ9CQE8 Gm23451-201ENSMUST00000083328 122 ntBASIC0.11□□□□□ -2.39
RTRAFQ9CQE8 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
RTRAFQ9CQE8 Gm25611-201ENSMUST00000104017 133 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm14906-201ENSMUST00000119265 390 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm11388-201ENSMUST00000120908 159 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm23821-201ENSMUST00000158738 106 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Mir100-201ENSMUST00000175270 80 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm26285-201ENSMUST00000177923 107 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm27672-201ENSMUST00000183751 204 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm37997-201ENSMUST00000193515 267 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm44455-201ENSMUST00000200061 82 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm23622-201ENSMUST00000082460 107 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm24929-201ENSMUST00000083403 139 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm24762-201ENSMUST00000083689 104 ntBASIC0.1□□□□□ -2.39
RTRAFQ9CQE8 Gm24867-201ENSMUST00000104161 107 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Gm26301-201ENSMUST00000104813 95 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Gm11322-201ENSMUST00000118095 435 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Gm14039-201ENSMUST00000118705 101 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Gm43406-201ENSMUST00000200356 334 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Gm19572-201ENSMUST00000214326 338 ntBASIC0.09□□□□□ -2.4
RTRAFQ9CQE8 Gm24488-201ENSMUST00000179934 127 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Gm25701-201ENSMUST00000179988 127 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Gm26431-201ENSMUST00000180199 127 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Mir6369-201ENSMUST00000183772 106 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Mir7050-201ENSMUST00000184636 60 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Mir3970-201ENSMUST00000199287 90 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Gm19790-201ENSMUST00000214414 251 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Gm25894-201ENSMUST00000083458 75 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Mir448-201ENSMUST00000083516 112 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
RTRAFQ9CQE8 Scarna9-201ENSMUST00000104318 70 ntBASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 Gm25111-201ENSMUST00000116686 147 ntBASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 Gm25720-201ENSMUST00000157503 105 ntBASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 Gm25952-201ENSMUST00000175329 74 ntBASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 Mir6951-201ENSMUST00000183910 75 ntBASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 Gm44373-201ENSMUST00000196112 169 ntBASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 Gm42795-201ENSMUST00000198847 76 ntBASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 Gm24460-201ENSMUST00000082731 106 ntBASIC0.07□□□□□ -2.4
RTRAFQ9CQE8 Gm14567-201ENSMUST00000117155 174 ntBASIC0.06□□□□□ -2.4
RTRAFQ9CQE8 Gm12686-201ENSMUST00000120546 397 ntBASIC0.06□□□□□ -2.4
RTRAFQ9CQE8 Gm26026-201ENSMUST00000122726 123 ntBASIC0.06□□□□□ -2.4
RTRAFQ9CQE8 Gm22790-201ENSMUST00000157229 129 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 192.2 ms