Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm22801-201ENSMUST00000175624 84 ntBASIC0.53□□□□□ -2.32
Sf3b1Q99NB9 Gm27905-201ENSMUST00000184005 207 ntBASIC0.53□□□□□ -2.32
Sf3b1Q99NB9 Mir7079-201ENSMUST00000184697 69 ntBASIC0.53□□□□□ -2.32
Sf3b1Q99NB9 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.53□□□□□ -2.32
Sf3b1Q99NB9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.52□□□□□ -2.33
Sf3b1Q99NB9 Gm13797-201ENSMUST00000121792 120 ntBASIC0.52□□□□□ -2.33
Sf3b1Q99NB9 Gm24006-201ENSMUST00000158462 132 ntBASIC0.52□□□□□ -2.33
Sf3b1Q99NB9 Gm24460-201ENSMUST00000082731 106 ntBASIC0.52□□□□□ -2.33
Sf3b1Q99NB9 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.52□□□□□ -2.33
Sf3b1Q99NB9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Sf3b1Q99NB9 Gm16546-201ENSMUST00000159442 355 ntBASIC0.51□□□□□ -2.33
Sf3b1Q99NB9 Gm16307-201ENSMUST00000161269 210 ntBASIC0.51□□□□□ -2.33
Sf3b1Q99NB9 Gm38019-201ENSMUST00000195133 380 ntBASIC0.51□□□□□ -2.33
Sf3b1Q99NB9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.51□□□□□ -2.33
Sf3b1Q99NB9 Mir500-201ENSMUST00000093600 92 ntBASIC0.51□□□□□ -2.33
Sf3b1Q99NB9 Gm22051-201ENSMUST00000117002 127 ntBASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Gm23655-201ENSMUST00000122627 105 ntBASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Gm23375-201ENSMUST00000175407 83 ntBASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Mir669k-201ENSMUST00000177742 127 ntBASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Gm23002-201ENSMUST00000179221 107 ntBASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Gm25673-201ENSMUST00000179957 127 ntBASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Gm27289-201ENSMUST00000183341 82 ntBASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Gm25634-201ENSMUST00000082667 105 ntBASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Gm23679-201ENSMUST00000083161 119 ntBASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Sf3b1Q99NB9 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
Sf3b1Q99NB9 Gm22101-201ENSMUST00000157928 103 ntBASIC0.49□□□□□ -2.33
Sf3b1Q99NB9 Mir1933-201ENSMUST00000158930 88 ntBASIC0.49□□□□□ -2.33
Sf3b1Q99NB9 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.49□□□□□ -2.33
Sf3b1Q99NB9 Gm22358-201ENSMUST00000082877 122 ntBASIC0.49□□□□□ -2.33
Sf3b1Q99NB9 Gm24527-201ENSMUST00000082920 107 ntBASIC0.49□□□□□ -2.33
Sf3b1Q99NB9 Gm25138-201ENSMUST00000083248 136 ntBASIC0.49□□□□□ -2.33
Sf3b1Q99NB9 Gm25188-201ENSMUST00000083913 122 ntBASIC0.49□□□□□ -2.33
Sf3b1Q99NB9 Gm22786-201ENSMUST00000104086 122 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm26293-201ENSMUST00000104170 84 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm14946-201ENSMUST00000119859 296 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm14883-201ENSMUST00000120179 157 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm23466-201ENSMUST00000157133 106 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm26484-201ENSMUST00000158018 106 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm23853-201ENSMUST00000158375 104 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm37715-201ENSMUST00000193206 235 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm44488-201ENSMUST00000199467 119 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Gm44462-201ENSMUST00000199696 129 ntBASIC0.48□□□□□ -2.33
Sf3b1Q99NB9 Mir669o-201ENSMUST00000103898 96 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 Mir881-201ENSMUST00000104844 78 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 Gm13922-201ENSMUST00000119505 156 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 Gm23672-201ENSMUST00000157471 107 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 Gm25720-201ENSMUST00000157503 105 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 Gm23003-201ENSMUST00000179948 107 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 Gm45859-201ENSMUST00000212794 214 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.47□□□□□ -2.33
Sf3b1Q99NB9 Gm6272-201ENSMUST00000121256 171 ntBASIC0.46□□□□□ -2.34
Sf3b1Q99NB9 Gm11204-201ENSMUST00000122438 147 ntBASIC0.46□□□□□ -2.34
Sf3b1Q99NB9 Gm24559-201ENSMUST00000157519 121 ntBASIC0.46□□□□□ -2.34
Sf3b1Q99NB9 Gm22767-201ENSMUST00000158365 165 ntBASIC0.46□□□□□ -2.34
Sf3b1Q99NB9 Gm25633-201ENSMUST00000178565 107 ntBASIC0.46□□□□□ -2.34
Sf3b1Q99NB9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.46□□□□□ -2.34
Sf3b1Q99NB9 Gm22686-201ENSMUST00000082847 100 ntBASIC0.46□□□□□ -2.34
Sf3b1Q99NB9 Mir30a-201ENSMUST00000083471 71 ntBASIC0.46□□□□□ -2.34
Sf3b1Q99NB9 Mir146-201ENSMUST00000083667 65 ntBASIC0.46□□□□□ -2.34
Sf3b1Q99NB9 Mir547-201ENSMUST00000102051 78 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm14001-201ENSMUST00000118847 247 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm25323-201ENSMUST00000122555 103 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm24635-201ENSMUST00000122712 128 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm26026-201ENSMUST00000122726 123 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm25828-201ENSMUST00000157087 95 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm25241-201ENSMUST00000174909 84 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm26217-201ENSMUST00000175212 84 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm25397-201ENSMUST00000176951 92 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm44464-201ENSMUST00000198010 138 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm8219-201ENSMUST00000218309 242 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Sf3b1Q99NB9 Gm25882-201ENSMUST00000157784 85 ntBASIC0.44□□□□□ -2.34
Sf3b1Q99NB9 Gm24547-201ENSMUST00000158649 149 ntBASIC0.44□□□□□ -2.34
Sf3b1Q99NB9 Gm19572-201ENSMUST00000214326 338 ntBASIC0.44□□□□□ -2.34
Sf3b1Q99NB9 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.44□□□□□ -2.34
Sf3b1Q99NB9 Gm6985-201ENSMUST00000121255 271 ntBASIC0.43□□□□□ -2.34
Sf3b1Q99NB9 Gm28020-201ENSMUST00000157739 67 ntBASIC0.43□□□□□ -2.34
Sf3b1Q99NB9 Gm23416-201ENSMUST00000175520 95 ntBASIC0.43□□□□□ -2.34
Sf3b1Q99NB9 Gm25935-201ENSMUST00000178746 107 ntBASIC0.43□□□□□ -2.34
Sf3b1Q99NB9 Gm27585-201ENSMUST00000183717 199 ntBASIC0.43□□□□□ -2.34
Sf3b1Q99NB9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.43□□□□□ -2.34
Sf3b1Q99NB9 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.43□□□□□ -2.34
Sf3b1Q99NB9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
Sf3b1Q99NB9 Gm22759-201ENSMUST00000102276 96 ntBASIC0.42□□□□□ -2.34
Sf3b1Q99NB9 Gm24555-201ENSMUST00000104548 124 ntBASIC0.42□□□□□ -2.34
Sf3b1Q99NB9 Gm25110-201ENSMUST00000116684 121 ntBASIC0.42□□□□□ -2.34
Sf3b1Q99NB9 Gm25775-201ENSMUST00000116716 121 ntBASIC0.42□□□□□ -2.34
Sf3b1Q99NB9 Gm24795-201ENSMUST00000116737 121 ntBASIC0.42□□□□□ -2.34
Sf3b1Q99NB9 Gm25171-201ENSMUST00000116926 121 ntBASIC0.42□□□□□ -2.34
Sf3b1Q99NB9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.42□□□□□ -2.34
Sf3b1Q99NB9 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Sf3b1Q99NB9 Mir669l-201ENSMUST00000103771 98 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 183.1 ms