Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
Cdk5rap3Q99LM2 Gm25848-201ENSMUST00000116790 144 ntBASIC0.45□□□□□ -2.34
Cdk5rap3Q99LM2 Gm25393-201ENSMUST00000157336 285 ntBASIC0.45□□□□□ -2.34
Cdk5rap3Q99LM2 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.45□□□□□ -2.34
Cdk5rap3Q99LM2 Gm26379-202ENSMUST00000200225 132 ntBASIC0.45□□□□□ -2.34
Cdk5rap3Q99LM2 Mir669i-201ENSMUST00000117007 127 ntBASIC0.44□□□□□ -2.34
Cdk5rap3Q99LM2 Gm11388-201ENSMUST00000120908 159 ntBASIC0.44□□□□□ -2.34
Cdk5rap3Q99LM2 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.44□□□□□ -2.34
Cdk5rap3Q99LM2 Gm22887-201ENSMUST00000178586 107 ntBASIC0.44□□□□□ -2.34
Cdk5rap3Q99LM2 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC0.44□□□□□ -2.34
Cdk5rap3Q99LM2 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.44□□□□□ -2.34
Cdk5rap3Q99LM2 Gm26326-201ENSMUST00000083070 129 ntBASIC0.44□□□□□ -2.34
Cdk5rap3Q99LM2 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.44□□□□□ -2.34
Cdk5rap3Q99LM2 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Cdk5rap3Q99LM2 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Cdk5rap3Q99LM2 Snord69-201ENSMUST00000104024 80 ntBASIC0.43□□□□□ -2.34
Cdk5rap3Q99LM2 Gm22469-201ENSMUST00000104118 133 ntBASIC0.43□□□□□ -2.34
Cdk5rap3Q99LM2 Gm25318-201ENSMUST00000122554 314 ntBASIC0.43□□□□□ -2.34
Cdk5rap3Q99LM2 Gm23605-201ENSMUST00000157255 127 ntBASIC0.43□□□□□ -2.34
Cdk5rap3Q99LM2 Gm24549-201ENSMUST00000158647 139 ntBASIC0.43□□□□□ -2.34
Cdk5rap3Q99LM2 Gm22466-201ENSMUST00000175278 69 ntBASIC0.43□□□□□ -2.34
Cdk5rap3Q99LM2 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm22673-201ENSMUST00000104415 131 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm15289-201ENSMUST00000117793 244 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm24594-201ENSMUST00000122502 99 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm24509-201ENSMUST00000157086 101 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm25358-201ENSMUST00000157189 101 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm24963-201ENSMUST00000157916 144 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm25935-201ENSMUST00000178746 107 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm43944-201ENSMUST00000205220 120 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 AC158981.3-202ENSMUST00000228906 523 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm25814-201ENSMUST00000082754 107 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm26123-201ENSMUST00000083363 135 ntBASIC0.42□□□□□ -2.34
Cdk5rap3Q99LM2 Gm25771-201ENSMUST00000158565 144 ntBASIC0.41□□□□□ -2.34
Cdk5rap3Q99LM2 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.41□□□□□ -2.34
Cdk5rap3Q99LM2 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.41□□□□□ -2.34
Cdk5rap3Q99LM2 Gm26076-201ENSMUST00000104065 105 ntBASIC0.4□□□□□ -2.35
Cdk5rap3Q99LM2 Gm27672-201ENSMUST00000183751 204 ntBASIC0.4□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22358-201ENSMUST00000082877 122 ntBASIC0.4□□□□□ -2.35
Cdk5rap3Q99LM2 Mir448-201ENSMUST00000083516 112 ntBASIC0.4□□□□□ -2.35
Cdk5rap3Q99LM2 Gm24258-201ENSMUST00000083739 133 ntBASIC0.4□□□□□ -2.35
Cdk5rap3Q99LM2 Gm25188-201ENSMUST00000083913 122 ntBASIC0.4□□□□□ -2.35
Cdk5rap3Q99LM2 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.4□□□□□ -2.35
Cdk5rap3Q99LM2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.39□□□□□ -2.35
Cdk5rap3Q99LM2 Gm25494-201ENSMUST00000158143 100 ntBASIC0.39□□□□□ -2.35
Cdk5rap3Q99LM2 Gm24724-201ENSMUST00000158230 107 ntBASIC0.39□□□□□ -2.35
Cdk5rap3Q99LM2 Gm24500-201ENSMUST00000158447 124 ntBASIC0.39□□□□□ -2.35
Cdk5rap3Q99LM2 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.39□□□□□ -2.35
Cdk5rap3Q99LM2 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Gm25170-201ENSMUST00000104191 129 ntBASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Gm23991-201ENSMUST00000117033 93 ntBASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Gm12837-201ENSMUST00000120131 373 ntBASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22999-201ENSMUST00000157082 88 ntBASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Gm23672-201ENSMUST00000157471 107 ntBASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Gm24415-201ENSMUST00000180218 107 ntBASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Gm27585-201ENSMUST00000183717 199 ntBASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Mir3970-201ENSMUST00000199287 90 ntBASIC0.38□□□□□ -2.35
Cdk5rap3Q99LM2 Gm11248-201ENSMUST00000119568 201 ntBASIC0.37□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22983-201ENSMUST00000158308 104 ntBASIC0.37□□□□□ -2.35
Cdk5rap3Q99LM2 Gm42506-201ENSMUST00000202009 150 ntBASIC0.37□□□□□ -2.35
Cdk5rap3Q99LM2 Gm24929-201ENSMUST00000083403 139 ntBASIC0.37□□□□□ -2.35
Cdk5rap3Q99LM2 Mir10b-201ENSMUST00000083566 68 ntBASIC0.37□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22576-201ENSMUST00000083733 104 ntBASIC0.37□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22003-201ENSMUST00000101885 107 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Mir669d-2-201ENSMUST00000116854 86 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22706-201ENSMUST00000157907 112 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm25300-201ENSMUST00000175284 84 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm23410-201ENSMUST00000179967 107 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22756-201ENSMUST00000180118 107 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Mir6390-201ENSMUST00000184405 129 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm38019-201ENSMUST00000195133 380 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm45541-201ENSMUST00000210443 54 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22505-201ENSMUST00000082956 108 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22363-201ENSMUST00000083100 108 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm23814-201ENSMUST00000083230 102 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm23095-201ENSMUST00000083446 107 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Mir532-201ENSMUST00000093630 96 ntBASIC0.36□□□□□ -2.35
Cdk5rap3Q99LM2 Gm22759-201ENSMUST00000102276 96 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Gm23989-201ENSMUST00000117030 66 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Gm13577-201ENSMUST00000121365 205 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Gm26026-201ENSMUST00000122726 123 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Gm26285-201ENSMUST00000177923 107 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Gm27668-201ENSMUST00000184188 120 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Gm6003-201ENSMUST00000187903 463 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Gm19790-201ENSMUST00000214414 251 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Gm23622-201ENSMUST00000082460 107 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Mir146-201ENSMUST00000083667 65 ntBASIC0.35□□□□□ -2.35
Cdk5rap3Q99LM2 Gm25611-201ENSMUST00000104017 133 ntBASIC0.34□□□□□ -2.36
Cdk5rap3Q99LM2 Gm13345-201ENSMUST00000121928 228 ntBASIC0.34□□□□□ -2.36
Cdk5rap3Q99LM2 Gm24728-201ENSMUST00000158226 125 ntBASIC0.34□□□□□ -2.36
Cdk5rap3Q99LM2 Gm25267-201ENSMUST00000158522 63 ntBASIC0.34□□□□□ -2.36
Cdk5rap3Q99LM2 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.34□□□□□ -2.36
Cdk5rap3Q99LM2 Mir384-201ENSMUST00000083565 88 ntBASIC0.34□□□□□ -2.36
Cdk5rap3Q99LM2 Gm25274-201ENSMUST00000104296 135 ntBASIC0.33□□□□□ -2.36
Cdk5rap3Q99LM2 Gm14567-201ENSMUST00000117155 174 ntBASIC0.33□□□□□ -2.36
Cdk5rap3Q99LM2 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.33□□□□□ -2.36
Cdk5rap3Q99LM2 Gm24476-201ENSMUST00000157437 131 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 144 ms