Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Mir3969-201ENSMUST00000197106 92 ntBASIC1.42□□□□□ -2.18
H1fooQ8VIK3 Gm10172-201ENSMUST00000085929 558 ntBASIC1.42□□□□□ -2.18
H1fooQ8VIK3 Mir489-201ENSMUST00000093599 107 ntBASIC1.42□□□□□ -2.18
H1fooQ8VIK3 Gm14502-201ENSMUST00000118154 113 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Gm22603-201ENSMUST00000157603 96 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Gm22386-201ENSMUST00000158192 129 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Mir669n-201ENSMUST00000158636 54 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Gm28256-201ENSMUST00000188953 139 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Gm28559-201ENSMUST00000190532 139 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Gm16976-205ENSMUST00000227324 226 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Gm26922-201ENSMUST00000082687 72 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.41□□□□□ -2.18
H1fooQ8VIK3 Gm11644-201ENSMUST00000119735 150 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Gm23670-201ENSMUST00000157469 119 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Gm24747-201ENSMUST00000157835 87 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Gm22665-201ENSMUST00000158720 275 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Gm16539-201ENSMUST00000160086 327 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Traj60-201ENSMUST00000167781 54 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Snora24-201ENSMUST00000174989 130 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Mir7225-201ENSMUST00000184178 54 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Gm45654-201ENSMUST00000210980 123 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Gm22723-201ENSMUST00000083820 129 ntBASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.4□□□□□ -2.19
H1fooQ8VIK3 Gm24263-201ENSMUST00000104059 107 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Gm26076-201ENSMUST00000104065 105 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Gm26011-201ENSMUST00000104410 104 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Gm24588-201ENSMUST00000116696 83 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Gm23109-201ENSMUST00000116867 126 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Gm14568-201ENSMUST00000119321 294 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Gm12309-201ENSMUST00000119889 182 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Gm25011-201ENSMUST00000158398 126 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Gm44859-201ENSMUST00000207831 94 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Gm23303-201ENSMUST00000082714 152 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Snord61-201ENSMUST00000083176 71 ntBASIC1.39□□□□□ -2.19
H1fooQ8VIK3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm25759-201ENSMUST00000103988 129 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm23010-201ENSMUST00000104151 126 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm24250-201ENSMUST00000157320 135 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm22079-201ENSMUST00000157592 106 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm25044-201ENSMUST00000158603 104 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm23375-201ENSMUST00000175407 83 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm23770-201ENSMUST00000178009 108 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm22832-201ENSMUST00000178022 108 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm23863-201ENSMUST00000178265 108 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm24828-201ENSMUST00000178507 108 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm23052-201ENSMUST00000178633 108 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm25729-201ENSMUST00000179050 108 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm25359-201ENSMUST00000179315 108 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm7258-201ENSMUST00000179317 300 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Gm22624-201ENSMUST00000179913 108 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Mir7679-201ENSMUST00000183379 63 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Mir6352-201ENSMUST00000184495 116 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.38□□□□□ -2.19
H1fooQ8VIK3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.37□□□□□ -2.19
H1fooQ8VIK3 Snord90-201ENSMUST00000104568 111 ntBASIC1.37□□□□□ -2.19
H1fooQ8VIK3 Gm22815-201ENSMUST00000157451 62 ntBASIC1.37□□□□□ -2.19
H1fooQ8VIK3 Gm23859-201ENSMUST00000158383 64 ntBASIC1.37□□□□□ -2.19
H1fooQ8VIK3 Gm25071-201ENSMUST00000175232 70 ntBASIC1.37□□□□□ -2.19
H1fooQ8VIK3 Gm27792-201ENSMUST00000184031 115 ntBASIC1.37□□□□□ -2.19
H1fooQ8VIK3 Gm44462-201ENSMUST00000199696 129 ntBASIC1.37□□□□□ -2.19
H1fooQ8VIK3 Gm26379-202ENSMUST00000200225 132 ntBASIC1.37□□□□□ -2.19
H1fooQ8VIK3 AC164561.1-201ENSMUST00000220414 115 ntBASIC1.37□□□□□ -2.19
H1fooQ8VIK3 Gm26123-201ENSMUST00000083363 135 ntBASIC1.37□□□□□ -2.19
H1fooQ8VIK3 Mir547-201ENSMUST00000102051 78 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Mir669b-201ENSMUST00000102172 97 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Gm44489-201ENSMUST00000104619 97 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Gm25836-201ENSMUST00000158918 123 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Gm25241-201ENSMUST00000174909 84 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Gm26217-201ENSMUST00000175212 84 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Gm27365-201ENSMUST00000184041 177 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Gm28383-201ENSMUST00000187563 139 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Gm23445-201ENSMUST00000082800 107 ntBASIC1.36□□□□□ -2.19
H1fooQ8VIK3 Mir6351-201ENSMUST00000183826 99 ntBASIC1.35□□□□□ -2.19
H1fooQ8VIK3 Gm44408-201ENSMUST00000200205 66 ntBASIC1.35□□□□□ -2.19
H1fooQ8VIK3 Gm26224-201ENSMUST00000082506 80 ntBASIC1.35□□□□□ -2.19
H1fooQ8VIK3 Gm23722-201ENSMUST00000083002 130 ntBASIC1.35□□□□□ -2.19
H1fooQ8VIK3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
H1fooQ8VIK3 Gm25377-201ENSMUST00000104334 129 ntBASIC1.34□□□□□ -2.19
H1fooQ8VIK3 Gm23907-201ENSMUST00000104595 189 ntBASIC1.34□□□□□ -2.19
H1fooQ8VIK3 Gm22796-201ENSMUST00000157234 106 ntBASIC1.34□□□□□ -2.19
H1fooQ8VIK3 Gm26291-201ENSMUST00000158889 137 ntBASIC1.34□□□□□ -2.19
H1fooQ8VIK3 Gm16399-201ENSMUST00000181423 219 ntBASIC1.34□□□□□ -2.19
H1fooQ8VIK3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.34□□□□□ -2.2
H1fooQ8VIK3 Gm25915-201ENSMUST00000104265 126 ntBASIC1.33□□□□□ -2.2
H1fooQ8VIK3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.33□□□□□ -2.2
H1fooQ8VIK3 Gm22384-201ENSMUST00000158187 104 ntBASIC1.33□□□□□ -2.2
H1fooQ8VIK3 Gm27420-201ENSMUST00000183823 79 ntBASIC1.33□□□□□ -2.2
H1fooQ8VIK3 Gm27248-201ENSMUST00000184004 166 ntBASIC1.33□□□□□ -2.2
H1fooQ8VIK3 Mir6928-201ENSMUST00000185166 70 ntBASIC1.33□□□□□ -2.2
H1fooQ8VIK3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.33□□□□□ -2.2
H1fooQ8VIK3 Gm44470-201ENSMUST00000203913 142 ntBASIC1.33□□□□□ -2.2
H1fooQ8VIK3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 347.5 ms