Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Gm25787-201ENSMUST00000104709 92 ntBASIC1.18□□□□□ -2.22
Trim68Q8K243 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.18□□□□□ -2.22
Trim68Q8K243 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.18□□□□□ -2.22
Trim68Q8K243 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.18□□□□□ -2.22
Trim68Q8K243 Gm11334-201ENSMUST00000121969 156 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Gm24288-201ENSMUST00000157630 144 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Gm23996-201ENSMUST00000158062 131 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Gm22888-201ENSMUST00000158640 77 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Gm26160-201ENSMUST00000158965 63 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.17□□□□□ -2.22
Trim68Q8K243 Gm37624-201ENSMUST00000193751 219 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Gm44464-201ENSMUST00000198010 138 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Snord47-201ENSMUST00000083034 77 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Mir302d-201ENSMUST00000083513 66 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Mir27b-201ENSMUST00000083541 73 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.17□□□□□ -2.22
Trim68Q8K243 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.17□□□□□ -2.22
Trim68Q8K243 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.16□□□□□ -2.22
Trim68Q8K243 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm22785-201ENSMUST00000104087 132 ntBASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm25416-201ENSMUST00000104221 107 ntBASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm25323-201ENSMUST00000122555 103 ntBASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm26415-201ENSMUST00000157673 292 ntBASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm22989-201ENSMUST00000158313 86 ntBASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm25901-201ENSMUST00000158494 130 ntBASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm25855-201ENSMUST00000082787 72 ntBASIC1.16□□□□□ -2.22
Trim68Q8K243 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.16□□□□□ -2.22
Trim68Q8K243 Snord72-201ENSMUST00000104549 81 ntBASIC1.15□□□□□ -2.23
Trim68Q8K243 Gm11856-201ENSMUST00000118712 276 ntBASIC1.15□□□□□ -2.23
Trim68Q8K243 Gm22337-201ENSMUST00000157721 132 ntBASIC1.15□□□□□ -2.23
Trim68Q8K243 Gm25558-201ENSMUST00000158083 106 ntBASIC1.15□□□□□ -2.23
Trim68Q8K243 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.15□□□□□ -2.23
Trim68Q8K243 Gm25750-201ENSMUST00000175483 112 ntBASIC1.15□□□□□ -2.23
Trim68Q8K243 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.15□□□□□ -2.23
Trim68Q8K243 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.15□□□□□ -2.23
Trim68Q8K243 Gm24276-201ENSMUST00000102181 110 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 Gm13246-201ENSMUST00000120994 315 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 Gm25985-201ENSMUST00000122677 107 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 Gm26089-201ENSMUST00000157898 107 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 Gm24345-201ENSMUST00000158706 124 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 Mir3061-201ENSMUST00000175129 91 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 Gm26073-201ENSMUST00000179906 127 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 Snord80-202ENSMUST00000199023 77 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 Gm22884-201ENSMUST00000083127 140 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 Gm25128-201ENSMUST00000083339 76 ntBASIC1.14□□□□□ -2.23
Trim68Q8K243 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.13□□□□□ -2.23
Trim68Q8K243 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Trim68Q8K243 Gm24750-201ENSMUST00000157843 104 ntBASIC1.13□□□□□ -2.23
Trim68Q8K243 Gm22476-201ENSMUST00000158902 100 ntBASIC1.13□□□□□ -2.23
Trim68Q8K243 Mir6381-201ENSMUST00000183426 87 ntBASIC1.13□□□□□ -2.23
Trim68Q8K243 Gm37997-201ENSMUST00000193515 267 ntBASIC1.13□□□□□ -2.23
Trim68Q8K243 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.13□□□□□ -2.23
Trim68Q8K243 Gm19790-201ENSMUST00000214414 251 ntBASIC1.13□□□□□ -2.23
Trim68Q8K243 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.13□□□□□ -2.23
Trim68Q8K243 Gm26074-201ENSMUST00000104063 129 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Gm24588-201ENSMUST00000116696 83 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Gm11792-201ENSMUST00000120640 168 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Gm24559-201ENSMUST00000157519 121 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Gm24777-201ENSMUST00000157644 107 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Gm22557-201ENSMUST00000157804 102 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Gm22163-201ENSMUST00000158408 135 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Gm25166-201ENSMUST00000158909 111 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Mir5104-201ENSMUST00000175319 94 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Gm45268-201ENSMUST00000210046 370 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Gm22973-201ENSMUST00000083298 191 ntBASIC1.12□□□□□ -2.23
Trim68Q8K243 Mir880-201ENSMUST00000104809 78 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Gm6952-201ENSMUST00000118629 159 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Gm22477-201ENSMUST00000122569 316 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Gm23783-201ENSMUST00000157941 102 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Gm24808-201ENSMUST00000157993 118 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Gm20391-201ENSMUST00000174722 106 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Mir7091-201ENSMUST00000184075 79 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Mir6481-201ENSMUST00000184617 110 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Gm38364-201ENSMUST00000191814 179 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Mir219b-201ENSMUST00000198317 65 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Gm45544-201ENSMUST00000211130 88 ntBASIC1.11□□□□□ -2.23
Trim68Q8K243 Gm25878-201ENSMUST00000104327 93 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Gm15069-201ENSMUST00000117792 192 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Gm15068-201ENSMUST00000119796 192 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Gm23893-201ENSMUST00000158106 134 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Gm25161-201ENSMUST00000158913 132 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Gm23008-201ENSMUST00000158946 80 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Gm22403-201ENSMUST00000174919 84 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Mir21b-201ENSMUST00000184317 108 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Gm22283-201ENSMUST00000082556 161 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Mir22-201ENSMUST00000083595 95 ntBASIC1.1□□□□□ -2.23
Trim68Q8K243 Gm24171-201ENSMUST00000104126 131 ntBASIC1.09□□□□□ -2.23
Trim68Q8K243 Gm22850-201ENSMUST00000157714 82 ntBASIC1.09□□□□□ -2.23
Trim68Q8K243 Gm25882-201ENSMUST00000157784 85 ntBASIC1.09□□□□□ -2.23
Trim68Q8K243 Gm24000-201ENSMUST00000158063 89 ntBASIC1.09□□□□□ -2.23
Trim68Q8K243 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.09□□□□□ -2.24
Trim68Q8K243 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 142.7 ms