Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.67□□□□□ -2.3
Ccdc38Q8CDN8 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.66□□□□□ -2.3
Ccdc38Q8CDN8 Gm23375-201ENSMUST00000175407 83 ntBASIC0.66□□□□□ -2.3
Ccdc38Q8CDN8 Gm24616-201ENSMUST00000083274 139 ntBASIC0.66□□□□□ -2.3
Ccdc38Q8CDN8 Gm24762-201ENSMUST00000083689 104 ntBASIC0.66□□□□□ -2.3
Ccdc38Q8CDN8 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
Ccdc38Q8CDN8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
Ccdc38Q8CDN8 Gm28020-201ENSMUST00000157739 67 ntBASIC0.65□□□□□ -2.31
Ccdc38Q8CDN8 Gm25901-201ENSMUST00000158494 130 ntBASIC0.65□□□□□ -2.31
Ccdc38Q8CDN8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.65□□□□□ -2.31
Ccdc38Q8CDN8 Gm25464-201ENSMUST00000175481 107 ntBASIC0.65□□□□□ -2.31
Ccdc38Q8CDN8 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Ccdc38Q8CDN8 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.65□□□□□ -2.31
Ccdc38Q8CDN8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.65□□□□□ -2.31
Ccdc38Q8CDN8 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.65□□□□□ -2.31
Ccdc38Q8CDN8 Gm23203-201ENSMUST00000104374 107 ntBASIC0.64□□□□□ -2.31
Ccdc38Q8CDN8 Gm25110-201ENSMUST00000116684 121 ntBASIC0.64□□□□□ -2.31
Ccdc38Q8CDN8 Gm25775-201ENSMUST00000116716 121 ntBASIC0.64□□□□□ -2.31
Ccdc38Q8CDN8 Gm24795-201ENSMUST00000116737 121 ntBASIC0.64□□□□□ -2.31
Ccdc38Q8CDN8 Gm25171-201ENSMUST00000116926 121 ntBASIC0.64□□□□□ -2.31
Ccdc38Q8CDN8 Gm25771-201ENSMUST00000158565 144 ntBASIC0.64□□□□□ -2.31
Ccdc38Q8CDN8 Gm25138-201ENSMUST00000083248 136 ntBASIC0.64□□□□□ -2.31
Ccdc38Q8CDN8 Mir384-201ENSMUST00000083565 88 ntBASIC0.64□□□□□ -2.31
Ccdc38Q8CDN8 Gm25882-201ENSMUST00000157784 85 ntBASIC0.63□□□□□ -2.31
Ccdc38Q8CDN8 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.63□□□□□ -2.31
Ccdc38Q8CDN8 Gm25935-201ENSMUST00000178746 107 ntBASIC0.63□□□□□ -2.31
Ccdc38Q8CDN8 Gm23003-201ENSMUST00000179948 107 ntBASIC0.63□□□□□ -2.31
Ccdc38Q8CDN8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.63□□□□□ -2.31
Ccdc38Q8CDN8 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.63□□□□□ -2.31
Ccdc38Q8CDN8 Gm14001-201ENSMUST00000118847 247 ntBASIC0.62□□□□□ -2.31
Ccdc38Q8CDN8 Mir7039-201ENSMUST00000183852 85 ntBASIC0.62□□□□□ -2.31
Ccdc38Q8CDN8 Mir6985-201ENSMUST00000184641 61 ntBASIC0.62□□□□□ -2.31
Ccdc38Q8CDN8 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.62□□□□□ -2.31
Ccdc38Q8CDN8 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.62□□□□□ -2.31
Ccdc38Q8CDN8 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.62□□□□□ -2.31
Ccdc38Q8CDN8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Ccdc38Q8CDN8 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Gm22796-201ENSMUST00000157234 106 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Gm26236-201ENSMUST00000175536 137 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Gm24415-201ENSMUST00000180218 107 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Gm27289-201ENSMUST00000183341 82 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Gm36956-201ENSMUST00000193830 214 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Gm44458-201ENSMUST00000196594 143 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Gm22302-201ENSMUST00000082657 106 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Gm26326-201ENSMUST00000083070 129 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Mir500-201ENSMUST00000093600 92 ntBASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Ccdc38Q8CDN8 Gm25397-201ENSMUST00000176951 92 ntBASIC0.6□□□□□ -2.31
Ccdc38Q8CDN8 Gm6003-201ENSMUST00000187903 463 ntBASIC0.6□□□□□ -2.31
Ccdc38Q8CDN8 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.6□□□□□ -2.31
Ccdc38Q8CDN8 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.6□□□□□ -2.31
Ccdc38Q8CDN8 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Ccdc38Q8CDN8 Mir10b-201ENSMUST00000083566 68 ntBASIC0.6□□□□□ -2.31
Ccdc38Q8CDN8 Mir344-201ENSMUST00000083634 95 ntBASIC0.6□□□□□ -2.31
Ccdc38Q8CDN8 Rny1-201ENSMUST00000083767 112 ntBASIC0.6□□□□□ -2.31
Ccdc38Q8CDN8 Gm25378-201ENSMUST00000104333 129 ntBASIC0.59□□□□□ -2.31
Ccdc38Q8CDN8 Gm23991-201ENSMUST00000117033 93 ntBASIC0.59□□□□□ -2.31
Ccdc38Q8CDN8 Gm23416-201ENSMUST00000175520 95 ntBASIC0.59□□□□□ -2.31
Ccdc38Q8CDN8 Gm27672-201ENSMUST00000183751 204 ntBASIC0.59□□□□□ -2.31
Ccdc38Q8CDN8 Gm11248-201ENSMUST00000119568 201 ntBASIC0.58□□□□□ -2.32
Ccdc38Q8CDN8 Gm22522-201ENSMUST00000158271 151 ntBASIC0.58□□□□□ -2.32
Ccdc38Q8CDN8 Mir1933-201ENSMUST00000158930 88 ntBASIC0.58□□□□□ -2.32
Ccdc38Q8CDN8 Gm24323-201ENSMUST00000175342 77 ntBASIC0.58□□□□□ -2.32
Ccdc38Q8CDN8 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Ccdc38Q8CDN8 Gm44488-201ENSMUST00000199467 119 ntBASIC0.58□□□□□ -2.32
Ccdc38Q8CDN8 Gm44211-201ENSMUST00000204867 145 ntBASIC0.58□□□□□ -2.32
Ccdc38Q8CDN8 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.58□□□□□ -2.32
Ccdc38Q8CDN8 Gm24342-201ENSMUST00000103907 104 ntBASIC0.57□□□□□ -2.32
Ccdc38Q8CDN8 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Ccdc38Q8CDN8 Gm14567-201ENSMUST00000117155 174 ntBASIC0.57□□□□□ -2.32
Ccdc38Q8CDN8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.57□□□□□ -2.32
Ccdc38Q8CDN8 Gm24920-201ENSMUST00000083018 85 ntBASIC0.57□□□□□ -2.32
Ccdc38Q8CDN8 Gm26123-201ENSMUST00000083363 135 ntBASIC0.57□□□□□ -2.32
Ccdc38Q8CDN8 Gm24929-201ENSMUST00000083403 139 ntBASIC0.57□□□□□ -2.32
Ccdc38Q8CDN8 Mir30a-201ENSMUST00000083471 71 ntBASIC0.57□□□□□ -2.32
Ccdc38Q8CDN8 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Ccdc38Q8CDN8 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Ccdc38Q8CDN8 Gm26076-201ENSMUST00000104065 105 ntBASIC0.56□□□□□ -2.32
Ccdc38Q8CDN8 Gm23841-201ENSMUST00000116951 114 ntBASIC0.56□□□□□ -2.32
Ccdc38Q8CDN8 Gm22482-201ENSMUST00000122563 359 ntBASIC0.56□□□□□ -2.32
Ccdc38Q8CDN8 Gm44989-201ENSMUST00000204749 217 ntBASIC0.56□□□□□ -2.32
Ccdc38Q8CDN8 Mir101a-201ENSMUST00000083517 83 ntBASIC0.56□□□□□ -2.32
Ccdc38Q8CDN8 Gm14884-201ENSMUST00000120456 196 ntBASIC0.55□□□□□ -2.32
Ccdc38Q8CDN8 Gm26484-201ENSMUST00000158018 106 ntBASIC0.55□□□□□ -2.32
Ccdc38Q8CDN8 Gm23853-201ENSMUST00000158375 104 ntBASIC0.55□□□□□ -2.32
Ccdc38Q8CDN8 Gm25362-201ENSMUST00000158854 105 ntBASIC0.55□□□□□ -2.32
Ccdc38Q8CDN8 Snora15-201ENSMUST00000177461 131 ntBASIC0.55□□□□□ -2.32
Ccdc38Q8CDN8 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.55□□□□□ -2.32
Ccdc38Q8CDN8 Mir541-201ENSMUST00000102097 90 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Snord100-201ENSMUST00000116836 74 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Gm6272-201ENSMUST00000121256 171 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Gm12815-201ENSMUST00000121737 135 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Gm24385-201ENSMUST00000122694 350 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Gm22433-201ENSMUST00000158550 142 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Gm43944-201ENSMUST00000205220 120 ntBASIC0.54□□□□□ -2.32
Ccdc38Q8CDN8 Gm26274-201ENSMUST00000157103 321 ntBASIC0.53□□□□□ -2.32
Ccdc38Q8CDN8 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 168.2 ms