Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm26230-201ENSMUST00000180141 79 ntBASIC2.42□□□□□ -2.02
Ubp1Q811S7 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Ubp1Q811S7 Gm43865-201ENSMUST00000204721 127 ntBASIC2.42□□□□□ -2.02
Ubp1Q811S7 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Ubp1Q811S7 Gm25610-201ENSMUST00000104016 129 ntBASIC2.41□□□□□ -2.02
Ubp1Q811S7 Snora36b-201ENSMUST00000104383 132 ntBASIC2.41□□□□□ -2.02
Ubp1Q811S7 Gm23654-201ENSMUST00000116758 126 ntBASIC2.41□□□□□ -2.02
Ubp1Q811S7 Gm24913-201ENSMUST00000157286 107 ntBASIC2.41□□□□□ -2.02
Ubp1Q811S7 Gm22070-201ENSMUST00000178475 107 ntBASIC2.41□□□□□ -2.02
Ubp1Q811S7 Gm27517-201ENSMUST00000184347 236 ntBASIC2.41□□□□□ -2.02
Ubp1Q811S7 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Ubp1Q811S7 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.41□□□□□ -2.02
Ubp1Q811S7 AC126939.3-201ENSMUST00000226061 166 ntBASIC2.41□□□□□ -2.02
Ubp1Q811S7 Gm26123-201ENSMUST00000083363 135 ntBASIC2.41□□□□□ -2.02
Ubp1Q811S7 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.41□□□□□ -2.02
Ubp1Q811S7 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Ubp1Q811S7 Gm25011-201ENSMUST00000158398 126 ntBASIC2.4□□□□□ -2.03
Ubp1Q811S7 Mir3092-201ENSMUST00000174954 96 ntBASIC2.4□□□□□ -2.03
Ubp1Q811S7 Gm3852-201ENSMUST00000182781 264 ntBASIC2.4□□□□□ -2.03
Ubp1Q811S7 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.39□□□□□ -2.03
Ubp1Q811S7 Gm22752-201ENSMUST00000102083 109 ntBASIC2.39□□□□□ -2.03
Ubp1Q811S7 Gm24075-201ENSMUST00000158175 72 ntBASIC2.39□□□□□ -2.03
Ubp1Q811S7 Gm22500-201ENSMUST00000158982 99 ntBASIC2.39□□□□□ -2.03
Ubp1Q811S7 Gm8034-201ENSMUST00000178853 132 ntBASIC2.39□□□□□ -2.03
Ubp1Q811S7 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.39□□□□□ -2.03
Ubp1Q811S7 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Ubp1Q811S7 Gm25611-201ENSMUST00000104017 133 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Gm26081-201ENSMUST00000104068 132 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Gm25866-201ENSMUST00000158245 112 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Gm24212-201ENSMUST00000158258 132 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Gm25838-201ENSMUST00000158920 120 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Gm20391-201ENSMUST00000174722 106 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Gm24816-201ENSMUST00000175311 151 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Gm23375-201ENSMUST00000175407 83 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Gm45429-201ENSMUST00000209527 172 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.38□□□□□ -2.03
Ubp1Q811S7 mt-Ts2-201ENSMUST00000082416 59 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Snora2b-201ENSMUST00000084005 137 ntBASIC2.38□□□□□ -2.03
Ubp1Q811S7 Gm26154-201ENSMUST00000102339 96 ntBASIC2.37□□□□□ -2.03
Ubp1Q811S7 Gm24900-201ENSMUST00000158128 134 ntBASIC2.37□□□□□ -2.03
Ubp1Q811S7 Gm24880-201ENSMUST00000158776 85 ntBASIC2.37□□□□□ -2.03
Ubp1Q811S7 Gm21885-201ENSMUST00000178891 327 ntBASIC2.37□□□□□ -2.03
Ubp1Q811S7 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.37□□□□□ -2.03
Ubp1Q811S7 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.37□□□□□ -2.03
Ubp1Q811S7 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.37□□□□□ -2.03
Ubp1Q811S7 Gm23100-201ENSMUST00000083455 141 ntBASIC2.37□□□□□ -2.03
Ubp1Q811S7 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ubp1Q811S7 Gm23172-201ENSMUST00000157160 124 ntBASIC2.36□□□□□ -2.03
Ubp1Q811S7 Gm22490-201ENSMUST00000157188 119 ntBASIC2.36□□□□□ -2.03
Ubp1Q811S7 Mir5104-201ENSMUST00000175319 94 ntBASIC2.36□□□□□ -2.03
Ubp1Q811S7 Gm28900-201ENSMUST00000185232 156 ntBASIC2.36□□□□□ -2.03
Ubp1Q811S7 Gm8031-201ENSMUST00000213430 626 ntBASIC2.36□□□□□ -2.03
Ubp1Q811S7 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.36□□□□□ -2.03
Ubp1Q811S7 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.36□□□□□ -2.03
Ubp1Q811S7 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ubp1Q811S7 Gm14588-201ENSMUST00000119895 172 ntBASIC2.35□□□□□ -2.03
Ubp1Q811S7 Gm16550-201ENSMUST00000162550 126 ntBASIC2.35□□□□□ -2.03
Ubp1Q811S7 Gm22004-201ENSMUST00000101884 107 ntBASIC2.34□□□□□ -2.03
Ubp1Q811S7 Gm23980-201ENSMUST00000157135 158 ntBASIC2.34□□□□□ -2.03
Ubp1Q811S7 Gm24210-201ENSMUST00000158263 133 ntBASIC2.34□□□□□ -2.03
Ubp1Q811S7 Mir3061-201ENSMUST00000175129 91 ntBASIC2.34□□□□□ -2.03
Ubp1Q811S7 Gm23963-201ENSMUST00000179603 77 ntBASIC2.34□□□□□ -2.03
Ubp1Q811S7 Gm25090-201ENSMUST00000104000 132 ntBASIC2.33□□□□□ -2.04
Ubp1Q811S7 Mir654-201ENSMUST00000104787 84 ntBASIC2.33□□□□□ -2.04
Ubp1Q811S7 Gm24475-201ENSMUST00000157435 143 ntBASIC2.33□□□□□ -2.04
Ubp1Q811S7 Mir3103-201ENSMUST00000175474 67 ntBASIC2.33□□□□□ -2.04
Ubp1Q811S7 Gm24572-201ENSMUST00000175505 88 ntBASIC2.33□□□□□ -2.04
Ubp1Q811S7 Gm5900-201ENSMUST00000179862 375 ntBASIC2.33□□□□□ -2.04
Ubp1Q811S7 Mir6379-201ENSMUST00000183392 115 ntBASIC2.33□□□□□ -2.04
Ubp1Q811S7 Gm43324-201ENSMUST00000197482 289 ntBASIC2.33□□□□□ -2.04
Ubp1Q811S7 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Ubp1Q811S7 Gm23803-201ENSMUST00000104610 132 ntBASIC2.32□□□□□ -2.04
Ubp1Q811S7 Gm24274-201ENSMUST00000116787 124 ntBASIC2.32□□□□□ -2.04
Ubp1Q811S7 Gm25423-201ENSMUST00000157609 107 ntBASIC2.32□□□□□ -2.04
Ubp1Q811S7 Gm16539-201ENSMUST00000160086 327 ntBASIC2.32□□□□□ -2.04
Ubp1Q811S7 Gm44462-201ENSMUST00000199696 129 ntBASIC2.32□□□□□ -2.04
Ubp1Q811S7 Gm44807-201ENSMUST00000206115 154 ntBASIC2.32□□□□□ -2.04
Ubp1Q811S7 Snord14a-201ENSMUST00000082807 87 ntBASIC2.32□□□□□ -2.04
Ubp1Q811S7 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.32□□□□□ -2.04
Ubp1Q811S7 Mir223-201ENSMUST00000102112 110 ntBASIC2.31□□□□□ -2.04
Ubp1Q811S7 Gm23889-201ENSMUST00000122689 104 ntBASIC2.31□□□□□ -2.04
Ubp1Q811S7 Gm25044-201ENSMUST00000158603 104 ntBASIC2.31□□□□□ -2.04
Ubp1Q811S7 Snora24-201ENSMUST00000174989 130 ntBASIC2.31□□□□□ -2.04
Ubp1Q811S7 Gm43626-201ENSMUST00000198575 162 ntBASIC2.31□□□□□ -2.04
Ubp1Q811S7 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Ubp1Q811S7 Gm44560-201ENSMUST00000207816 3115 ntBASIC2.31□□□□□ -2.04
Ubp1Q811S7 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Ubp1Q811S7 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Ubp1Q811S7 Gm25544-201ENSMUST00000122676 120 ntBASIC2.3□□□□□ -2.04
Ubp1Q811S7 Gm22425-201ENSMUST00000158532 138 ntBASIC2.3□□□□□ -2.04
Ubp1Q811S7 Gm22200-201ENSMUST00000158614 67 ntBASIC2.3□□□□□ -2.04
Ubp1Q811S7 Gm22403-201ENSMUST00000174919 84 ntBASIC2.3□□□□□ -2.04
Ubp1Q811S7 Gm25035-201ENSMUST00000175414 77 ntBASIC2.3□□□□□ -2.04
Ubp1Q811S7 Gm22638-201ENSMUST00000179674 107 ntBASIC2.3□□□□□ -2.04
Ubp1Q811S7 Gm27369-201ENSMUST00000185182 71 ntBASIC2.3□□□□□ -2.04
Ubp1Q811S7 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.3□□□□□ -2.04
Ubp1Q811S7 Gm24805-201ENSMUST00000082931 104 ntBASIC2.3□□□□□ -2.04
Ubp1Q811S7 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Ubp1Q811S7 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
Ubp1Q811S7 Gm22517-201ENSMUST00000158265 136 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 161.7 ms