Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm29535-201ENSMUST00000185723 109 ntBASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 Gm28143-201ENSMUST00000191082 109 ntBASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 AC156574.2-201ENSMUST00000228023 282 ntBASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 Gm24901-201ENSMUST00000158125 110 ntBASIC-0.77□□□□□ -2.53
Nup98Q6PFD9 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.77□□□□□ -2.53
Nup98Q6PFD9 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.77□□□□□ -2.53
Nup98Q6PFD9 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.77□□□□□ -2.53
Nup98Q6PFD9 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.77□□□□□ -2.53
Nup98Q6PFD9 AC147101.1-201ENSMUST00000217964 312 ntBASIC-0.77□□□□□ -2.53
Nup98Q6PFD9 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm24233-201ENSMUST00000104317 122 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm22215-201ENSMUST00000157558 96 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm22541-201ENSMUST00000158165 127 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm24818-201ENSMUST00000175093 161 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm25935-201ENSMUST00000178746 107 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm26158-201ENSMUST00000158973 119 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm44807-201ENSMUST00000206115 154 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 AC132615.1-201ENSMUST00000213873 255 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 AL772265.1-201ENSMUST00000214379 305 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm24042-201ENSMUST00000083114 103 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 Gm26497-201ENSMUST00000083146 107 ntBASIC-0.78□□□□□ -2.53
Nup98Q6PFD9 AC158981.3-202ENSMUST00000228906 523 ntBASIC-0.79□□□□□ -2.54
Nup98Q6PFD9 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.79□□□□□ -2.54
Nup98Q6PFD9 Gm22031-201ENSMUST00000116945 126 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm11322-201ENSMUST00000118095 435 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm25163-201ENSMUST00000158905 104 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 AC150901.1-201ENSMUST00000208407 145 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 AC129085.1-201ENSMUST00000225263 165 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm15899-201ENSMUST00000128586 238 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm23857-201ENSMUST00000158379 111 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm43810-201ENSMUST00000201018 232 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 AC125374.2-201ENSMUST00000214278 162 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm23239-201ENSMUST00000083006 181 ntBASIC-0.8□□□□□ -2.54
Nup98Q6PFD9 Gm25538-201ENSMUST00000101943 107 ntBASIC-0.81□□□□□ -2.54
Nup98Q6PFD9 Gm15030-201ENSMUST00000119804 484 ntBASIC-0.81□□□□□ -2.54
Nup98Q6PFD9 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.81□□□□□ -2.54
Nup98Q6PFD9 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.81□□□□□ -2.54
Nup98Q6PFD9 Gm23352-201ENSMUST00000158428 64 ntBASIC-0.81□□□□□ -2.54
Nup98Q6PFD9 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.81□□□□□ -2.54
Nup98Q6PFD9 Snord8-201ENSMUST00000175303 110 ntBASIC-0.81□□□□□ -2.54
Nup98Q6PFD9 Gm26437-201ENSMUST00000082595 105 ntBASIC-0.81□□□□□ -2.54
Nup98Q6PFD9 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC-0.81□□□□□ -2.54
Nup98Q6PFD9 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Mir669i-201ENSMUST00000117007 127 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm14007-201ENSMUST00000118288 210 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm23232-201ENSMUST00000157300 105 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm25434-201ENSMUST00000158278 167 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm28016-201ENSMUST00000184594 196 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm44468-201ENSMUST00000199516 105 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm23515-201ENSMUST00000082829 107 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Mir532-201ENSMUST00000093630 96 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.82□□□□□ -2.54
Nup98Q6PFD9 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
Nup98Q6PFD9 Gm10548-202ENSMUST00000165672 272 ntBASIC-0.83□□□□□ -2.54
Nup98Q6PFD9 Gm26430-201ENSMUST00000178054 107 ntBASIC-0.83□□□□□ -2.54
Nup98Q6PFD9 Gm26164-201ENSMUST00000083793 104 ntBASIC-0.83□□□□□ -2.54
Nup98Q6PFD9 Gm26108-201ENSMUST00000083973 191 ntBASIC-0.83□□□□□ -2.54
Nup98Q6PFD9 Mir669o-201ENSMUST00000103898 96 ntBASIC-0.84□□□□□ -2.54
Nup98Q6PFD9 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.84□□□□□ -2.54
Nup98Q6PFD9 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.84□□□□□ -2.54
Nup98Q6PFD9 Gm24198-201ENSMUST00000157812 108 ntBASIC-0.84□□□□□ -2.54
Nup98Q6PFD9 Gm23025-201ENSMUST00000158769 111 ntBASIC-0.84□□□□□ -2.54
Nup98Q6PFD9 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.84□□□□□ -2.54
Nup98Q6PFD9 Gm24614-201ENSMUST00000083269 107 ntBASIC-0.84□□□□□ -2.54
Nup98Q6PFD9 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-0.85□□□□□ -2.54
Nup98Q6PFD9 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.85□□□□□ -2.54
Nup98Q6PFD9 Gm23881-201ENSMUST00000116872 66 ntBASIC-0.85□□□□□ -2.54
Nup98Q6PFD9 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.85□□□□□ -2.54
Nup98Q6PFD9 Gm37438-201ENSMUST00000192813 393 ntBASIC-0.85□□□□□ -2.54
Nup98Q6PFD9 Gm23145-201ENSMUST00000178912 79 ntBASIC-0.85□□□□□ -2.55
Nup98Q6PFD9 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.85□□□□□ -2.55
Nup98Q6PFD9 AC159093.2-201ENSMUST00000227881 297 ntBASIC-0.85□□□□□ -2.55
Nup98Q6PFD9 Gm25930-201ENSMUST00000082785 107 ntBASIC-0.85□□□□□ -2.55
Nup98Q6PFD9 Gm23448-201ENSMUST00000083151 104 ntBASIC-0.85□□□□□ -2.55
Nup98Q6PFD9 Gm22294-201ENSMUST00000083308 104 ntBASIC-0.85□□□□□ -2.55
Nup98Q6PFD9 Gm22030-201ENSMUST00000116942 63 ntBASIC-0.86□□□□□ -2.55
Nup98Q6PFD9 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.86□□□□□ -2.55
Nup98Q6PFD9 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 277.2 ms