Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm44325-201ENSMUST00000196757 77 ntBASIC2.54□□□□□ -2
Sh3rf1Q69ZI1 Gm26379-202ENSMUST00000200225 132 ntBASIC2.54□□□□□ -2
Sh3rf1Q69ZI1 Gm44555-201ENSMUST00000209008 148 ntBASIC2.54□□□□□ -2
Sh3rf1Q69ZI1 Mir411-201ENSMUST00000083543 82 ntBASIC2.54□□□□□ -2
Sh3rf1Q69ZI1 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Sh3rf1Q69ZI1 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Sh3rf1Q69ZI1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm24274-201ENSMUST00000116787 124 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm22151-201ENSMUST00000116963 58 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm14882-201ENSMUST00000117216 218 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm24238-201ENSMUST00000157792 98 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm23033-201ENSMUST00000157996 134 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm24345-201ENSMUST00000158706 124 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Mir6376-201ENSMUST00000185149 131 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm37807-201ENSMUST00000194310 190 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 AC132833.2-201ENSMUST00000228699 157 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Sh3rf1Q69ZI1 Gm26339-201ENSMUST00000102368 99 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Gm26077-201ENSMUST00000104064 123 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Gm25529-201ENSMUST00000104850 92 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Gm26425-201ENSMUST00000122529 82 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Gm23351-201ENSMUST00000158427 125 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Gm16584-201ENSMUST00000159267 189 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Mir5118-201ENSMUST00000175551 67 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Gm25449-201ENSMUST00000179389 79 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 AC140930.2-201ENSMUST00000221803 109 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Mir34c-201ENSMUST00000083653 77 ntBASIC2.52□□□□□ -2.01
Sh3rf1Q69ZI1 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Gm24593-201ENSMUST00000122507 106 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Gm23390-201ENSMUST00000157393 106 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Gm25370-201ENSMUST00000158159 94 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Gm22535-201ENSMUST00000158174 119 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Gm23369-201ENSMUST00000175406 105 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Gm43722-201ENSMUST00000196054 124 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Gm19118-201ENSMUST00000222554 98 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Mir301-201ENSMUST00000083655 86 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.51□□□□□ -2.01
Sh3rf1Q69ZI1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sh3rf1Q69ZI1 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Sh3rf1Q69ZI1 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.5□□□□□ -2.01
Sh3rf1Q69ZI1 Gm24000-201ENSMUST00000158063 89 ntBASIC2.5□□□□□ -2.01
Sh3rf1Q69ZI1 Gm26073-201ENSMUST00000179906 127 ntBASIC2.5□□□□□ -2.01
Sh3rf1Q69ZI1 Gm27991-201ENSMUST00000184804 137 ntBASIC2.5□□□□□ -2.01
Sh3rf1Q69ZI1 Gm45268-201ENSMUST00000210046 370 ntBASIC2.5□□□□□ -2.01
Sh3rf1Q69ZI1 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.5□□□□□ -2.01
Sh3rf1Q69ZI1 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.5□□□□□ -2.01
Sh3rf1Q69ZI1 Gm24670-201ENSMUST00000104154 132 ntBASIC2.49□□□□□ -2.01
Sh3rf1Q69ZI1 Gm26342-201ENSMUST00000104557 129 ntBASIC2.49□□□□□ -2.01
Sh3rf1Q69ZI1 Gm27878-201ENSMUST00000184000 106 ntBASIC2.49□□□□□ -2.01
Sh3rf1Q69ZI1 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 n-R5s39-201ENSMUST00000122613 108 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Gm22999-201ENSMUST00000157082 88 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Gm22338-201ENSMUST00000157715 129 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Gm23838-201ENSMUST00000158067 162 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Gm22666-201ENSMUST00000158717 164 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Gm25642-201ENSMUST00000175137 66 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Mir3961-201ENSMUST00000198795 59 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Gm8031-201ENSMUST00000213430 626 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Snora20-201ENSMUST00000082703 128 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.48□□□□□ -2.01
Sh3rf1Q69ZI1 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Gm22672-201ENSMUST00000104414 134 ntBASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Gm13433-201ENSMUST00000121701 240 ntBASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Gm23854-201ENSMUST00000158378 108 ntBASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Gm23181-201ENSMUST00000158685 110 ntBASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Gm19855-201ENSMUST00000210145 249 ntBASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Mir423-201ENSMUST00000083584 109 ntBASIC2.47□□□□□ -2.01
Sh3rf1Q69ZI1 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Sh3rf1Q69ZI1 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.46□□□□□ -2.02
Sh3rf1Q69ZI1 Mir3075-201ENSMUST00000175340 85 ntBASIC2.46□□□□□ -2.02
Sh3rf1Q69ZI1 Mir5619-201ENSMUST00000176065 61 ntBASIC2.46□□□□□ -2.02
Sh3rf1Q69ZI1 Gm25855-201ENSMUST00000082787 72 ntBASIC2.46□□□□□ -2.02
Sh3rf1Q69ZI1 Gm24527-201ENSMUST00000082920 107 ntBASIC2.46□□□□□ -2.02
Sh3rf1Q69ZI1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
Sh3rf1Q69ZI1 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Gm26015-201ENSMUST00000104402 125 ntBASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Gm22099-201ENSMUST00000157925 123 ntBASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Gm22768-201ENSMUST00000158366 153 ntBASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Gm3852-201ENSMUST00000182781 264 ntBASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Gm25357-201ENSMUST00000082745 72 ntBASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Snord80-201ENSMUST00000083801 81 ntBASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Sh3rf1Q69ZI1 Mir802-201ENSMUST00000103258 97 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 168.8 ms