Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Trim28Q62318 AC154515.1-201ENSMUST00000226085 2841 ntBASIC2.4□□□□□ -2.03
Trim28Q62318 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Trim28Q62318 Gm24468-201ENSMUST00000104489 104 ntBASIC2.39□□□□□ -2.03
Trim28Q62318 Gm22071-201ENSMUST00000116857 83 ntBASIC2.39□□□□□ -2.03
Trim28Q62318 Gm13885-201ENSMUST00000117569 187 ntBASIC2.39□□□□□ -2.03
Trim28Q62318 Gm24559-201ENSMUST00000157519 121 ntBASIC2.39□□□□□ -2.03
Trim28Q62318 Gm25888-201ENSMUST00000157778 302 ntBASIC2.39□□□□□ -2.03
Trim28Q62318 Gm35736-201ENSMUST00000203681 313 ntBASIC2.39□□□□□ -2.03
Trim28Q62318 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.39□□□□□ -2.03
Trim28Q62318 Gm24977-201ENSMUST00000083106 163 ntBASIC2.39□□□□□ -2.03
Trim28Q62318 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Trim28Q62318 Gm26154-201ENSMUST00000102339 96 ntBASIC2.38□□□□□ -2.03
Trim28Q62318 Gm22796-201ENSMUST00000157234 106 ntBASIC2.38□□□□□ -2.03
Trim28Q62318 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Trim28Q62318 Gm44482-201ENSMUST00000199232 103 ntBASIC2.38□□□□□ -2.03
Trim28Q62318 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.38□□□□□ -2.03
Trim28Q62318 AC161250.2-201ENSMUST00000215114 3107 ntBASIC2.38□□□□□ -2.03
Trim28Q62318 Gm14674-201ENSMUST00000117816 342 ntBASIC2.37□□□□□ -2.03
Trim28Q62318 Gm25289-201ENSMUST00000122799 119 ntBASIC2.37□□□□□ -2.03
Trim28Q62318 Gm23858-201ENSMUST00000158384 106 ntBASIC2.37□□□□□ -2.03
Trim28Q62318 Gm25678-201ENSMUST00000174984 73 ntBASIC2.37□□□□□ -2.03
Trim28Q62318 Mir3083-201ENSMUST00000175377 64 ntBASIC2.37□□□□□ -2.03
Trim28Q62318 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.37□□□□□ -2.03
Trim28Q62318 Gm24615-201ENSMUST00000083268 113 ntBASIC2.37□□□□□ -2.03
Trim28Q62318 Mir93-201ENSMUST00000083593 88 ntBASIC2.37□□□□□ -2.03
Trim28Q62318 Gm14946-201ENSMUST00000119859 296 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 Gm14709-201ENSMUST00000121225 304 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 Gm22163-201ENSMUST00000158408 135 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 Gm23113-201ENSMUST00000158477 99 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 Gm26466-201ENSMUST00000179615 79 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 Gm42807-201ENSMUST00000200141 329 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 Gm44057-201ENSMUST00000204547 96 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 Gm45429-201ENSMUST00000209527 172 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.36□□□□□ -2.03
Trim28Q62318 Mir29c-201ENSMUST00000083614 88 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trim28Q62318 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Trim28Q62318 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.36□□□□□ -2.03
Trim28Q62318 Gm22772-201ENSMUST00000104451 121 ntBASIC2.35□□□□□ -2.03
Trim28Q62318 Gm14923-201ENSMUST00000118270 155 ntBASIC2.35□□□□□ -2.03
Trim28Q62318 Gm13246-201ENSMUST00000120994 315 ntBASIC2.35□□□□□ -2.03
Trim28Q62318 Mir3094-201ENSMUST00000175121 64 ntBASIC2.35□□□□□ -2.03
Trim28Q62318 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.35□□□□□ -2.03
Trim28Q62318 Gm26326-201ENSMUST00000083070 129 ntBASIC2.35□□□□□ -2.03
Trim28Q62318 Gm22354-201ENSMUST00000083919 70 ntBASIC2.35□□□□□ -2.03
Trim28Q62318 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.35□□□□□ -2.03
Trim28Q62318 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Trim28Q62318 Snord78-201ENSMUST00000104032 66 ntBASIC2.34□□□□□ -2.03
Trim28Q62318 Gm26420-201ENSMUST00000104273 103 ntBASIC2.34□□□□□ -2.03
Trim28Q62318 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trim28Q62318 Gm26415-201ENSMUST00000157673 292 ntBASIC2.34□□□□□ -2.03
Trim28Q62318 Gm26498-201ENSMUST00000177799 79 ntBASIC2.34□□□□□ -2.03
Trim28Q62318 Gm26230-201ENSMUST00000180141 79 ntBASIC2.34□□□□□ -2.03
Trim28Q62318 Mir6905-201ENSMUST00000184228 70 ntBASIC2.34□□□□□ -2.03
Trim28Q62318 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.34□□□□□ -2.03
Trim28Q62318 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.34□□□□□ -2.03
Trim28Q62318 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.33□□□□□ -2.04
Trim28Q62318 Gm22761-201ENSMUST00000102278 96 ntBASIC2.33□□□□□ -2.04
Trim28Q62318 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trim28Q62318 Gm23654-201ENSMUST00000116758 126 ntBASIC2.33□□□□□ -2.04
Trim28Q62318 Gm15281-201ENSMUST00000125181 351 ntBASIC2.33□□□□□ -2.04
Trim28Q62318 Gm22221-201ENSMUST00000157362 103 ntBASIC2.33□□□□□ -2.04
Trim28Q62318 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.33□□□□□ -2.04
Trim28Q62318 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.33□□□□□ -2.04
Trim28Q62318 Mir489-201ENSMUST00000093599 107 ntBASIC2.33□□□□□ -2.04
Trim28Q62318 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Trim28Q62318 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Trim28Q62318 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim28Q62318 Gm25090-201ENSMUST00000104000 132 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm15069-201ENSMUST00000117792 192 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm15068-201ENSMUST00000119796 192 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm24632-201ENSMUST00000122770 323 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm22099-201ENSMUST00000157925 123 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm25771-201ENSMUST00000158565 144 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm24510-201ENSMUST00000174965 94 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm24656-201ENSMUST00000177548 132 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm22638-201ENSMUST00000179674 107 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm5900-201ENSMUST00000179862 375 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm26379-202ENSMUST00000200225 132 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm23790-201ENSMUST00000083013 107 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm24099-201ENSMUST00000083384 107 ntBASIC2.32□□□□□ -2.04
Trim28Q62318 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Trim28Q62318 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trim28Q62318 Gm24913-201ENSMUST00000157286 107 ntBASIC2.31□□□□□ -2.04
Trim28Q62318 Gm22770-201ENSMUST00000158368 67 ntBASIC2.31□□□□□ -2.04
Trim28Q62318 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.31□□□□□ -2.04
Trim28Q62318 Mir300-201ENSMUST00000083485 79 ntBASIC2.31□□□□□ -2.04
Trim28Q62318 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.31□□□□□ -2.04
Trim28Q62318 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trim28Q62318 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trim28Q62318 Mir466l-201ENSMUST00000104866 121 ntBASIC2.3□□□□□ -2.04
Trim28Q62318 Gm22451-201ENSMUST00000122803 151 ntBASIC2.3□□□□□ -2.04
Trim28Q62318 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.3□□□□□ -2.04
Trim28Q62318 Mir7009-201ENSMUST00000184519 64 ntBASIC2.3□□□□□ -2.04
Trim28Q62318 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.3□□□□□ -2.04
Trim28Q62318 Gm25279-201ENSMUST00000122608 133 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Gm25558-201ENSMUST00000158083 106 ntBASIC2.29□□□□□ -2.04
Trim28Q62318 Gm25368-201ENSMUST00000158847 131 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 138.2 ms