Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm22228-201ENSMUST00000157364 101 ntBASIC1.76□□□□□ -2.13
CtcfQ61164 Gm22082-201ENSMUST00000157587 161 ntBASIC1.76□□□□□ -2.13
CtcfQ61164 Gm44464-201ENSMUST00000198010 138 ntBASIC1.76□□□□□ -2.13
CtcfQ61164 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.76□□□□□ -2.13
CtcfQ61164 Gm8219-201ENSMUST00000218309 242 ntBASIC1.76□□□□□ -2.13
CtcfQ61164 AC124739.2-201ENSMUST00000222201 109 ntBASIC1.76□□□□□ -2.13
CtcfQ61164 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.76□□□□□ -2.13
CtcfQ61164 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.76□□□□□ -2.13
CtcfQ61164 Snora3-201ENSMUST00000083082 132 ntBASIC1.76□□□□□ -2.13
CtcfQ61164 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.76□□□□□ -2.13
CtcfQ61164 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CtcfQ61164 Gm25832-201ENSMUST00000104140 130 ntBASIC1.75□□□□□ -2.13
CtcfQ61164 Gm25976-201ENSMUST00000158695 130 ntBASIC1.75□□□□□ -2.13
CtcfQ61164 Gm28383-201ENSMUST00000187563 139 ntBASIC1.75□□□□□ -2.13
CtcfQ61164 Gm43911-201ENSMUST00000203097 76 ntBASIC1.75□□□□□ -2.13
CtcfQ61164 Gm23303-201ENSMUST00000082714 152 ntBASIC1.75□□□□□ -2.13
CtcfQ61164 Gm14567-201ENSMUST00000117155 174 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Gm23656-201ENSMUST00000122626 112 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Gm22386-201ENSMUST00000158192 129 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Gm27672-201ENSMUST00000183751 204 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Gm27248-201ENSMUST00000184004 166 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Gm18433-201ENSMUST00000192747 197 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Gm37796-201ENSMUST00000195327 134 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.74□□□□□ -2.13
CtcfQ61164 Gm25357-201ENSMUST00000082745 72 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Gm25815-201ENSMUST00000082755 107 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC1.74□□□□□ -2.13
CtcfQ61164 Gm26074-201ENSMUST00000104063 129 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Mir293-201ENSMUST00000104841 80 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Gm11644-201ENSMUST00000119735 150 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Gm16186-201ENSMUST00000120132 216 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Gm13246-201ENSMUST00000120994 315 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Mir6240-201ENSMUST00000184281 117 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Mir6352-201ENSMUST00000184495 116 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Mir6985-201ENSMUST00000184641 61 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Gm18665-201ENSMUST00000189783 270 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Gm25588-201ENSMUST00000082501 140 ntBASIC1.73□□□□□ -2.13
CtcfQ61164 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.72□□□□□ -2.13
CtcfQ61164 Gm22761-201ENSMUST00000102278 96 ntBASIC1.72□□□□□ -2.13
CtcfQ61164 Snord71-201ENSMUST00000104361 85 ntBASIC1.72□□□□□ -2.13
CtcfQ61164 Gm24916-201ENSMUST00000157287 79 ntBASIC1.72□□□□□ -2.13
CtcfQ61164 Gm23558-201ENSMUST00000157823 80 ntBASIC1.72□□□□□ -2.13
CtcfQ61164 Gm25161-201ENSMUST00000158913 132 ntBASIC1.72□□□□□ -2.13
CtcfQ61164 Gm23504-201ENSMUST00000158988 95 ntBASIC1.72□□□□□ -2.13
CtcfQ61164 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.72□□□□□ -2.13
CtcfQ61164 Gm23370-201ENSMUST00000199545 130 ntBASIC1.72□□□□□ -2.13
CtcfQ61164 Gm25627-201ENSMUST00000084003 153 ntBASIC1.72□□□□□ -2.13
CtcfQ61164 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
CtcfQ61164 Gm14626-201ENSMUST00000117619 216 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.71□□□□□ -2.14
CtcfQ61164 Gm24559-201ENSMUST00000157519 121 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Gm24747-201ENSMUST00000157835 87 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CtcfQ61164 Gm23567-201ENSMUST00000178005 107 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Gm28669-201ENSMUST00000188400 100 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Gm38298-201ENSMUST00000193578 118 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Gm44358-201ENSMUST00000196301 98 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Gm44325-201ENSMUST00000196757 77 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Gm43381-201ENSMUST00000198553 165 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Gm8508-201ENSMUST00000061226 363 ntBASIC1.71□□□□□ -2.14
CtcfQ61164 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
CtcfQ61164 Gm26011-201ENSMUST00000104410 104 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm25787-201ENSMUST00000104709 92 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm24482-201ENSMUST00000117005 93 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.7□□□□□ -2.14
CtcfQ61164 Gm25423-201ENSMUST00000157609 107 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm25884-201ENSMUST00000157782 62 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm23898-201ENSMUST00000158111 103 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Mir1931-201ENSMUST00000158589 119 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm22665-201ENSMUST00000158720 275 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Mir6419-201ENSMUST00000184784 113 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm43898-201ENSMUST00000204456 424 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.7□□□□□ -2.14
CtcfQ61164 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm26456-201ENSMUST00000082831 111 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm26054-201ENSMUST00000083037 107 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Gm24492-201ENSMUST00000083798 107 ntBASIC1.7□□□□□ -2.14
CtcfQ61164 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CtcfQ61164 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CtcfQ61164 Gm15069-201ENSMUST00000117792 192 ntBASIC1.69□□□□□ -2.14
CtcfQ61164 Gm14502-201ENSMUST00000118154 113 ntBASIC1.69□□□□□ -2.14
CtcfQ61164 Gm15068-201ENSMUST00000119796 192 ntBASIC1.69□□□□□ -2.14
CtcfQ61164 Gm24262-201ENSMUST00000157431 144 ntBASIC1.69□□□□□ -2.14
CtcfQ61164 Mir7657-201ENSMUST00000196051 57 ntBASIC1.69□□□□□ -2.14
CtcfQ61164 Gm24406-201ENSMUST00000083026 128 ntBASIC1.69□□□□□ -2.14
CtcfQ61164 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
CtcfQ61164 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.69□□□□□ -2.14
CtcfQ61164 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.68□□□□□ -2.14
CtcfQ61164 Gm24895-201ENSMUST00000122742 74 ntBASIC1.68□□□□□ -2.14
CtcfQ61164 Gm25558-201ENSMUST00000158083 106 ntBASIC1.68□□□□□ -2.14
CtcfQ61164 Gm22163-201ENSMUST00000158408 135 ntBASIC1.68□□□□□ -2.14
CtcfQ61164 Gm23208-201ENSMUST00000158666 127 ntBASIC1.68□□□□□ -2.14
CtcfQ61164 Mir3057-201ENSMUST00000175040 91 ntBASIC1.68□□□□□ -2.14
CtcfQ61164 Gm27792-201ENSMUST00000184031 115 ntBASIC1.68□□□□□ -2.14
CtcfQ61164 Gm27493-201ENSMUST00000184128 78 ntBASIC1.68□□□□□ -2.14
CtcfQ61164 Mir7675-201ENSMUST00000184262 58 ntBASIC1.68□□□□□ -2.14
CtcfQ61164 Gm25987-201ENSMUST00000083234 107 ntBASIC1.68□□□□□ -2.14
CtcfQ61164 Mir489-201ENSMUST00000093599 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 219.1 ms