Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm27803-201ENSMUST00000183763 119 ntBASIC1.07□□□□□ -2.24
Trim58Q5NCC9 Gm27285-201ENSMUST00000183875 127 ntBASIC1.07□□□□□ -2.24
Trim58Q5NCC9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Trim58Q5NCC9 AL929417.1-201ENSMUST00000214901 124 ntBASIC1.07□□□□□ -2.24
Trim58Q5NCC9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.07□□□□□ -2.24
Trim58Q5NCC9 Gm14671-201ENSMUST00000121790 262 ntBASIC1.06□□□□□ -2.24
Trim58Q5NCC9 Gm25882-201ENSMUST00000157784 85 ntBASIC1.06□□□□□ -2.24
Trim58Q5NCC9 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.06□□□□□ -2.24
Trim58Q5NCC9 Mir21b-201ENSMUST00000184317 108 ntBASIC1.06□□□□□ -2.24
Trim58Q5NCC9 Gm44358-201ENSMUST00000196301 98 ntBASIC1.06□□□□□ -2.24
Trim58Q5NCC9 Mir721-201ENSMUST00000200230 88 ntBASIC1.06□□□□□ -2.24
Trim58Q5NCC9 Gm19790-201ENSMUST00000214414 251 ntBASIC1.06□□□□□ -2.24
Trim58Q5NCC9 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.06□□□□□ -2.24
Trim58Q5NCC9 Snora20-201ENSMUST00000082703 128 ntBASIC1.06□□□□□ -2.24
Trim58Q5NCC9 Gm24431-201ENSMUST00000104073 66 ntBASIC1.05□□□□□ -2.24
Trim58Q5NCC9 Gm26038-201ENSMUST00000158151 106 ntBASIC1.05□□□□□ -2.24
Trim58Q5NCC9 Gm24020-201ENSMUST00000180156 108 ntBASIC1.05□□□□□ -2.24
Trim58Q5NCC9 Mir7039-201ENSMUST00000183852 85 ntBASIC1.05□□□□□ -2.24
Trim58Q5NCC9 Gm37624-201ENSMUST00000193751 219 ntBASIC1.05□□□□□ -2.24
Trim58Q5NCC9 Snord96a-201ENSMUST00000082791 81 ntBASIC1.05□□□□□ -2.24
Trim58Q5NCC9 Gm24523-201ENSMUST00000083965 132 ntBASIC1.05□□□□□ -2.24
Trim58Q5NCC9 Mir471-201ENSMUST00000093596 67 ntBASIC1.05□□□□□ -2.24
Trim58Q5NCC9 Gm23772-201ENSMUST00000104433 102 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm15069-201ENSMUST00000117792 192 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm15068-201ENSMUST00000119796 192 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm13345-201ENSMUST00000121928 228 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm22557-201ENSMUST00000157804 102 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm25715-201ENSMUST00000158627 125 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm23419-201ENSMUST00000175523 84 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Mir8116-201ENSMUST00000184134 97 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm28256-201ENSMUST00000188953 139 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm28559-201ENSMUST00000190532 139 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm25588-201ENSMUST00000082501 140 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm26225-201ENSMUST00000082508 135 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm26326-201ENSMUST00000083070 129 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Mir27b-201ENSMUST00000083541 73 ntBASIC1.04□□□□□ -2.24
Trim58Q5NCC9 Gm22689-201ENSMUST00000102452 110 ntBASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Gm26076-201ENSMUST00000104065 105 ntBASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Gm24171-201ENSMUST00000104126 131 ntBASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Gm24588-201ENSMUST00000116696 83 ntBASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Gm25663-201ENSMUST00000157698 135 ntBASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Gm22337-201ENSMUST00000157721 132 ntBASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Gm25949-201ENSMUST00000175333 114 ntBASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Gm42623-201ENSMUST00000197225 379 ntBASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Snord80-202ENSMUST00000199023 77 ntBASIC1.03□□□□□ -2.24
Trim58Q5NCC9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Gm22785-201ENSMUST00000104087 132 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Gm25985-201ENSMUST00000122677 107 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Gm23329-201ENSMUST00000157415 108 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Gm26090-201ENSMUST00000157897 128 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Gm22476-201ENSMUST00000158902 100 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Gm17020-201ENSMUST00000172274 274 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Gm45471-201ENSMUST00000211270 281 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Mir302d-201ENSMUST00000083513 66 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Gm25650-201ENSMUST00000083784 162 ntBASIC1.02□□□□□ -2.25
Trim58Q5NCC9 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.02□□□□□ -2.25
Trim58Q5NCC9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trim58Q5NCC9 Gm6952-201ENSMUST00000118629 159 ntBASIC1.01□□□□□ -2.25
Trim58Q5NCC9 Gm24379-201ENSMUST00000122695 86 ntBASIC1.01□□□□□ -2.25
Trim58Q5NCC9 Gm22850-201ENSMUST00000157714 82 ntBASIC1.01□□□□□ -2.25
Trim58Q5NCC9 Mir7663-201ENSMUST00000183950 61 ntBASIC1.01□□□□□ -2.25
Trim58Q5NCC9 Gm27465-201ENSMUST00000184290 91 ntBASIC1.01□□□□□ -2.25
Trim58Q5NCC9 Gm38364-201ENSMUST00000191814 179 ntBASIC1.01□□□□□ -2.25
Trim58Q5NCC9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.01□□□□□ -2.25
Trim58Q5NCC9 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.01□□□□□ -2.25
Trim58Q5NCC9 Gm22612-201ENSMUST00000158293 101 ntBASIC1□□□□□ -2.25
Trim58Q5NCC9 Gm22989-201ENSMUST00000158313 86 ntBASIC1□□□□□ -2.25
Trim58Q5NCC9 Gm24131-201ENSMUST00000158539 107 ntBASIC1□□□□□ -2.25
Trim58Q5NCC9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Trim58Q5NCC9 Mir3968-201ENSMUST00000175355 100 ntBASIC1□□□□□ -2.25
Trim58Q5NCC9 Gm44396-201ENSMUST00000199843 114 ntBASIC1□□□□□ -2.25
Trim58Q5NCC9 Gm44301-201ENSMUST00000200362 143 ntBASIC1□□□□□ -2.25
Trim58Q5NCC9 AC192091.2-201ENSMUST00000217869 117 ntBASIC1□□□□□ -2.25
Trim58Q5NCC9 Gm18188-201ENSMUST00000219386 478 ntBASIC1□□□□□ -2.25
Trim58Q5NCC9 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC1□□□□□ -2.25
Trim58Q5NCC9 Gm24276-201ENSMUST00000102181 110 ntBASIC0.99□□□□□ -2.25
Trim58Q5NCC9 Gm26403-201ENSMUST00000158500 105 ntBASIC0.99□□□□□ -2.25
Trim58Q5NCC9 Gm25771-201ENSMUST00000158565 144 ntBASIC0.99□□□□□ -2.25
Trim58Q5NCC9 Gm16539-201ENSMUST00000160086 327 ntBASIC0.99□□□□□ -2.25
Trim58Q5NCC9 Gm27672-201ENSMUST00000183751 204 ntBASIC0.99□□□□□ -2.25
Trim58Q5NCC9 Gm27365-201ENSMUST00000184041 177 ntBASIC0.99□□□□□ -2.25
Trim58Q5NCC9 Mir7059-201ENSMUST00000184825 59 ntBASIC0.99□□□□□ -2.25
Trim58Q5NCC9 Snord47-201ENSMUST00000083034 77 ntBASIC0.99□□□□□ -2.25
Trim58Q5NCC9 Gm25128-201ENSMUST00000083339 76 ntBASIC0.99□□□□□ -2.25
Trim58Q5NCC9 Gm22387-201ENSMUST00000158191 131 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Gm24880-201ENSMUST00000158776 85 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Gm16404-201ENSMUST00000177739 468 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Gm14598-201ENSMUST00000180109 468 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Gm14625-201ENSMUST00000180231 468 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Mir468-201ENSMUST00000197332 78 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Gm44976-201ENSMUST00000205543 261 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Gm44922-201ENSMUST00000206690 90 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Mir488-201ENSMUST00000093595 109 ntBASIC0.98□□□□□ -2.25
Trim58Q5NCC9 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.97□□□□□ -2.25
Trim58Q5NCC9 Gm24579-201ENSMUST00000103964 144 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 276.7 ms