Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Mir721-201ENSMUST00000200230 88 ntBASIC0.87□□□□□ -2.27
Trim40Q3UWA4 Gm23375-201ENSMUST00000175407 83 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Gm27285-201ENSMUST00000183875 127 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Mir3569-201ENSMUST00000185080 58 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Gm44301-201ENSMUST00000200362 143 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Gm18213-201ENSMUST00000207850 178 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Gm44948-201ENSMUST00000209050 149 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Mir302d-201ENSMUST00000083513 66 ntBASIC0.86□□□□□ -2.27
Trim40Q3UWA4 Gm22750-201ENSMUST00000102076 103 ntBASIC0.85□□□□□ -2.27
Trim40Q3UWA4 Gm26076-201ENSMUST00000104065 105 ntBASIC0.85□□□□□ -2.27
Trim40Q3UWA4 Gm27465-201ENSMUST00000184290 91 ntBASIC0.85□□□□□ -2.27
Trim40Q3UWA4 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.85□□□□□ -2.27
Trim40Q3UWA4 Gm24311-201ENSMUST00000082570 104 ntBASIC0.85□□□□□ -2.27
Trim40Q3UWA4 Gm22738-201ENSMUST00000083440 147 ntBASIC0.85□□□□□ -2.27
Trim40Q3UWA4 Mir547-201ENSMUST00000102051 78 ntBASIC0.84□□□□□ -2.27
Trim40Q3UWA4 Gm24271-201ENSMUST00000102327 111 ntBASIC0.84□□□□□ -2.27
Trim40Q3UWA4 Gm22557-201ENSMUST00000157804 102 ntBASIC0.84□□□□□ -2.27
Trim40Q3UWA4 Gm22476-201ENSMUST00000158902 100 ntBASIC0.84□□□□□ -2.27
Trim40Q3UWA4 Gm23636-201ENSMUST00000175070 95 ntBASIC0.84□□□□□ -2.27
Trim40Q3UWA4 Gm23567-201ENSMUST00000178005 107 ntBASIC0.84□□□□□ -2.27
Trim40Q3UWA4 Gm13231-201ENSMUST00000119218 2850 ntBASIC0.84□□□□□ -2.28
Trim40Q3UWA4 Gm25985-201ENSMUST00000122677 107 ntBASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Gm22790-201ENSMUST00000157229 129 ntBASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Gm24401-201ENSMUST00000157868 91 ntBASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Gm26360-201ENSMUST00000158872 103 ntBASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Gm24415-201ENSMUST00000180218 107 ntBASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Gm27974-201ENSMUST00000183415 105 ntBASIC0.83□□□□□ -2.28
Trim40Q3UWA4 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Gm26204-201ENSMUST00000082906 107 ntBASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Gm23461-201ENSMUST00000083265 107 ntBASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trim40Q3UWA4 Gm25565-201ENSMUST00000104605 105 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Gm22195-201ENSMUST00000116861 108 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Gm22482-201ENSMUST00000122563 359 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Gm25241-201ENSMUST00000174909 84 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Gm26217-201ENSMUST00000175212 84 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Gm22621-201ENSMUST00000179678 74 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Mir7039-201ENSMUST00000183852 85 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Gm27898-201ENSMUST00000183987 80 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Mir6962-201ENSMUST00000199512 63 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Gm25588-201ENSMUST00000082501 140 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Gm25636-201ENSMUST00000082666 133 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.82□□□□□ -2.28
Trim40Q3UWA4 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.81□□□□□ -2.28
Trim40Q3UWA4 Gm22689-201ENSMUST00000102452 110 ntBASIC0.81□□□□□ -2.28
Trim40Q3UWA4 Gm16307-201ENSMUST00000161269 210 ntBASIC0.81□□□□□ -2.28
Trim40Q3UWA4 Gm37746-201ENSMUST00000193249 198 ntBASIC0.81□□□□□ -2.28
Trim40Q3UWA4 Gm37116-201ENSMUST00000195161 147 ntBASIC0.81□□□□□ -2.28
Trim40Q3UWA4 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.81□□□□□ -2.28
Trim40Q3UWA4 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.81□□□□□ -2.28
Trim40Q3UWA4 Mir324-201ENSMUST00000083600 89 ntBASIC0.81□□□□□ -2.28
Trim40Q3UWA4 Mir471-201ENSMUST00000093596 67 ntBASIC0.81□□□□□ -2.28
Trim40Q3UWA4 Gm22148-201ENSMUST00000104445 107 ntBASIC0.8□□□□□ -2.28
Trim40Q3UWA4 Gm22612-201ENSMUST00000158293 101 ntBASIC0.8□□□□□ -2.28
Trim40Q3UWA4 Gm25768-201ENSMUST00000158570 98 ntBASIC0.8□□□□□ -2.28
Trim40Q3UWA4 Gm25364-201ENSMUST00000158851 107 ntBASIC0.8□□□□□ -2.28
Trim40Q3UWA4 Gm38323-201ENSMUST00000192450 210 ntBASIC0.8□□□□□ -2.28
Trim40Q3UWA4 Gm37624-201ENSMUST00000193751 219 ntBASIC0.8□□□□□ -2.28
Trim40Q3UWA4 Gm42533-201ENSMUST00000196247 157 ntBASIC0.8□□□□□ -2.28
Trim40Q3UWA4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.79□□□□□ -2.28
Trim40Q3UWA4 Gm25938-201ENSMUST00000104139 166 ntBASIC0.79□□□□□ -2.28
Trim40Q3UWA4 Gm25882-201ENSMUST00000157784 85 ntBASIC0.79□□□□□ -2.28
Trim40Q3UWA4 Gm23763-201ENSMUST00000158345 60 ntBASIC0.79□□□□□ -2.28
Trim40Q3UWA4 Gm22946-201ENSMUST00000158558 82 ntBASIC0.79□□□□□ -2.28
Trim40Q3UWA4 Gm18188-201ENSMUST00000219386 478 ntBASIC0.79□□□□□ -2.28
Trim40Q3UWA4 Gm23772-201ENSMUST00000104433 102 ntBASIC0.78□□□□□ -2.28
Trim40Q3UWA4 Gm22999-201ENSMUST00000157082 88 ntBASIC0.78□□□□□ -2.28
Trim40Q3UWA4 Gm25769-201ENSMUST00000158569 127 ntBASIC0.78□□□□□ -2.28
Trim40Q3UWA4 Mir6377-201ENSMUST00000183760 114 ntBASIC0.78□□□□□ -2.28
Trim40Q3UWA4 Gm44853-201ENSMUST00000209070 250 ntBASIC0.78□□□□□ -2.28
Trim40Q3UWA4 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC0.78□□□□□ -2.28
Trim40Q3UWA4 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.78□□□□□ -2.28
Trim40Q3UWA4 Gm26123-201ENSMUST00000083363 135 ntBASIC0.78□□□□□ -2.28
Trim40Q3UWA4 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Mir7050-201ENSMUST00000184636 60 ntBASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Mir7062-201ENSMUST00000185038 66 ntBASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Gm27587-201ENSMUST00000185116 163 ntBASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Snord80-202ENSMUST00000199023 77 ntBASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Gm44462-201ENSMUST00000199696 129 ntBASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Gm22576-201ENSMUST00000083733 104 ntBASIC0.77□□□□□ -2.29
Trim40Q3UWA4 Mir709-201ENSMUST00000102190 88 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm26420-201ENSMUST00000104273 103 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm24250-201ENSMUST00000157320 135 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm23770-201ENSMUST00000178009 108 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm22832-201ENSMUST00000178022 108 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm23863-201ENSMUST00000178265 108 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm24828-201ENSMUST00000178507 108 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm23052-201ENSMUST00000178633 108 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm25729-201ENSMUST00000179050 108 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm25359-201ENSMUST00000179315 108 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm22624-201ENSMUST00000179913 108 ntBASIC0.76□□□□□ -2.29
Trim40Q3UWA4 Gm27803-201ENSMUST00000183763 119 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 129.5 ms