Protein–RNA interactions for Protein: P59114

Pcif1, Phosphorylated CTD-interacting factor 1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1P59114 Gm25650-201ENSMUST00000083784 162 ntBASIC1.43□□□□□ -2.18
Pcif1P59114 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Pcif1P59114 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.42□□□□□ -2.18
Pcif1P59114 Gm24131-201ENSMUST00000158539 107 ntBASIC1.42□□□□□ -2.18
Pcif1P59114 Gm24106-201ENSMUST00000175498 127 ntBASIC1.42□□□□□ -2.18
Pcif1P59114 Gm27928-201ENSMUST00000183747 256 ntBASIC1.42□□□□□ -2.18
Pcif1P59114 Gm37116-201ENSMUST00000195161 147 ntBASIC1.42□□□□□ -2.18
Pcif1P59114 Gm25992-201ENSMUST00000102437 109 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 Gm23578-201ENSMUST00000103943 104 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 Gm25599-201ENSMUST00000157816 103 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 Gm22612-201ENSMUST00000158293 101 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 Gm23350-201ENSMUST00000158429 103 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 Gm25838-201ENSMUST00000158920 120 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 Gm16399-201ENSMUST00000181423 219 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 Gm44922-201ENSMUST00000206690 90 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 Gm18213-201ENSMUST00000207850 178 ntBASIC1.41□□□□□ -2.18
Pcif1P59114 Gm22200-201ENSMUST00000158614 67 ntBASIC1.4□□□□□ -2.19
Pcif1P59114 Gm24880-201ENSMUST00000158776 85 ntBASIC1.4□□□□□ -2.19
Pcif1P59114 Gm23567-201ENSMUST00000178005 107 ntBASIC1.4□□□□□ -2.19
Pcif1P59114 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.4□□□□□ -2.19
Pcif1P59114 Gm27326-201ENSMUST00000183504 95 ntBASIC1.4□□□□□ -2.19
Pcif1P59114 Gm44358-201ENSMUST00000196301 98 ntBASIC1.4□□□□□ -2.19
Pcif1P59114 Gm23377-201ENSMUST00000082943 126 ntBASIC1.4□□□□□ -2.19
Pcif1P59114 Gm25495-201ENSMUST00000104431 131 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 Gm25428-201ENSMUST00000157608 114 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 Gm23339-201ENSMUST00000158962 139 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 Gm23714-201ENSMUST00000179259 105 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 Mir7665-201ENSMUST00000184907 63 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.39□□□□□ -2.19
Pcif1P59114 Gm42988-201ENSMUST00000198116 225 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 Gm5002-201ENSMUST00000207145 223 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 Gm23678-201ENSMUST00000083157 107 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.39□□□□□ -2.19
Pcif1P59114 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Pcif1P59114 Gm16539-201ENSMUST00000160086 327 ntBASIC1.38□□□□□ -2.19
Pcif1P59114 Gm22699-201ENSMUST00000175376 105 ntBASIC1.38□□□□□ -2.19
Pcif1P59114 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.38□□□□□ -2.19
Pcif1P59114 Gm28256-201ENSMUST00000188953 139 ntBASIC1.38□□□□□ -2.19
Pcif1P59114 Gm28559-201ENSMUST00000190532 139 ntBASIC1.38□□□□□ -2.19
Pcif1P59114 Gm25588-201ENSMUST00000082501 140 ntBASIC1.38□□□□□ -2.19
Pcif1P59114 Gm26326-201ENSMUST00000083070 129 ntBASIC1.38□□□□□ -2.19
Pcif1P59114 Mir488-201ENSMUST00000093595 109 ntBASIC1.38□□□□□ -2.19
Pcif1P59114 Gm23907-201ENSMUST00000104595 189 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Pcif1P59114 Gm11857-201ENSMUST00000119817 324 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Gm22790-201ENSMUST00000157229 129 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Snord13-201ENSMUST00000157627 104 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Gm25882-201ENSMUST00000157784 85 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Gm23080-201ENSMUST00000157846 103 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Gm22606-201ENSMUST00000158290 103 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Gm22946-201ENSMUST00000158558 82 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Pcif1P59114 Snora24-201ENSMUST00000174989 130 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Gm22286-201ENSMUST00000179708 107 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Pcif1P59114 AC151902.2-201ENSMUST00000226419 301 ntBASIC1.37□□□□□ -2.19
Pcif1P59114 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
Pcif1P59114 Mir343-201ENSMUST00000102360 75 ntBASIC1.36□□□□□ -2.19
Pcif1P59114 Gm24865-201ENSMUST00000103246 96 ntBASIC1.36□□□□□ -2.19
Pcif1P59114 Gm23772-201ENSMUST00000104433 102 ntBASIC1.36□□□□□ -2.19
Pcif1P59114 Gm14568-201ENSMUST00000119321 294 ntBASIC1.36□□□□□ -2.19
Pcif1P59114 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.36□□□□□ -2.19
Pcif1P59114 Gm23083-201ENSMUST00000157851 116 ntBASIC1.36□□□□□ -2.19
Pcif1P59114 Mir7039-201ENSMUST00000183852 85 ntBASIC1.36□□□□□ -2.19
Pcif1P59114 Gm42623-201ENSMUST00000197225 379 ntBASIC1.36□□□□□ -2.19
Pcif1P59114 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Pcif1P59114 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Pcif1P59114 Gm26403-201ENSMUST00000158500 105 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 Gm24054-201ENSMUST00000158619 105 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 Gm25716-201ENSMUST00000158628 104 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 Gm25364-201ENSMUST00000158851 107 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 Gm16546-201ENSMUST00000159442 355 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 Gm22914-201ENSMUST00000175195 77 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 Gm27365-201ENSMUST00000184041 177 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 Gm44385-201ENSMUST00000198781 81 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 Gm26224-201ENSMUST00000082506 80 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.35□□□□□ -2.19
Pcif1P59114 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 Gm25915-201ENSMUST00000104265 126 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 Gm24001-201ENSMUST00000158463 85 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 Gm17020-201ENSMUST00000172274 274 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 Gm22862-201ENSMUST00000178593 121 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 Gm26097-201ENSMUST00000179642 93 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 Gm25820-201ENSMUST00000198589 127 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 Mir6962-201ENSMUST00000199512 63 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 Gm25081-201ENSMUST00000082534 108 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 Gm25136-201ENSMUST00000083253 115 ntBASIC1.34□□□□□ -2.19
Pcif1P59114 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.33□□□□□ -2.2
Pcif1P59114 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Pcif1P59114 Gm26076-201ENSMUST00000104065 105 ntBASIC1.33□□□□□ -2.2
Pcif1P59114 Mir1298-201ENSMUST00000116681 98 ntBASIC1.33□□□□□ -2.2
Pcif1P59114 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC1.33□□□□□ -2.2
Pcif1P59114 Gm22551-201ENSMUST00000157795 103 ntBASIC1.33□□□□□ -2.2
Pcif1P59114 Gm22485-201ENSMUST00000157990 109 ntBASIC1.33□□□□□ -2.2
Pcif1P59114 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.33□□□□□ -2.2
Pcif1P59114 Mir201-201ENSMUST00000083470 66 ntBASIC1.33□□□□□ -2.2
Pcif1P59114 Gm22780-201ENSMUST00000104084 132 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 211.3 ms