Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
NcanP55066 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
NcanP55066 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.36□□□□□ -2.19
NcanP55066 Gm25627-201ENSMUST00000084003 153 ntBASIC1.36□□□□□ -2.19
NcanP55066 Gm22348-201ENSMUST00000178674 79 ntBASIC1.35□□□□□ -2.19
NcanP55066 Gm44325-201ENSMUST00000196757 77 ntBASIC1.35□□□□□ -2.19
NcanP55066 Gm42623-201ENSMUST00000197225 379 ntBASIC1.35□□□□□ -2.19
NcanP55066 Gm25697-201ENSMUST00000082902 98 ntBASIC1.35□□□□□ -2.19
NcanP55066 Gm24920-201ENSMUST00000083018 85 ntBASIC1.35□□□□□ -2.19
NcanP55066 Mir34a-201ENSMUST00000083559 102 ntBASIC1.35□□□□□ -2.19
NcanP55066 Gm26293-201ENSMUST00000104170 84 ntBASIC1.34□□□□□ -2.19
NcanP55066 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.34□□□□□ -2.19
NcanP55066 Gm23655-201ENSMUST00000122627 105 ntBASIC1.34□□□□□ -2.19
NcanP55066 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.34□□□□□ -2.19
NcanP55066 Gm27928-201ENSMUST00000183747 256 ntBASIC1.34□□□□□ -2.19
NcanP55066 Gm28409-201ENSMUST00000187064 103 ntBASIC1.34□□□□□ -2.19
NcanP55066 Gm21064-202ENSMUST00000190583 278 ntBASIC1.34□□□□□ -2.19
NcanP55066 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.34□□□□□ -2.19
NcanP55066 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.34□□□□□ -2.19
NcanP55066 Gm25409-201ENSMUST00000083764 131 ntBASIC1.34□□□□□ -2.19
NcanP55066 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.34□□□□□ -2.2
NcanP55066 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.33□□□□□ -2.2
NcanP55066 Gm24375-201ENSMUST00000104397 132 ntBASIC1.33□□□□□ -2.2
NcanP55066 Gm23113-201ENSMUST00000158477 99 ntBASIC1.33□□□□□ -2.2
NcanP55066 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.33□□□□□ -2.2
NcanP55066 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
NcanP55066 Mir101a-201ENSMUST00000083517 83 ntBASIC1.33□□□□□ -2.2
NcanP55066 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NcanP55066 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.32□□□□□ -2.2
NcanP55066 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
NcanP55066 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.32□□□□□ -2.2
NcanP55066 Gm25985-201ENSMUST00000122677 107 ntBASIC1.32□□□□□ -2.2
NcanP55066 Gm23221-201ENSMUST00000158118 93 ntBASIC1.32□□□□□ -2.2
NcanP55066 Gm24634-201ENSMUST00000158672 107 ntBASIC1.32□□□□□ -2.2
NcanP55066 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.32□□□□□ -2.2
NcanP55066 Gm44326-201ENSMUST00000198226 101 ntBASIC1.32□□□□□ -2.2
NcanP55066 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.32□□□□□ -2.2
NcanP55066 Mir27b-201ENSMUST00000083541 73 ntBASIC1.32□□□□□ -2.2
NcanP55066 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
NcanP55066 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.31□□□□□ -2.2
NcanP55066 Gm24131-201ENSMUST00000158539 107 ntBASIC1.31□□□□□ -2.2
NcanP55066 Mir6350-201ENSMUST00000183639 105 ntBASIC1.31□□□□□ -2.2
NcanP55066 Snord80-202ENSMUST00000199023 77 ntBASIC1.31□□□□□ -2.2
NcanP55066 Gm44057-201ENSMUST00000204547 96 ntBASIC1.31□□□□□ -2.2
NcanP55066 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.31□□□□□ -2.2
NcanP55066 Mir186-201ENSMUST00000083497 71 ntBASIC1.31□□□□□ -2.2
NcanP55066 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.31□□□□□ -2.2
NcanP55066 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.31□□□□□ -2.2
NcanP55066 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.31□□□□□ -2.2
NcanP55066 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.31□□□□□ -2.2
NcanP55066 Gm24276-201ENSMUST00000102181 110 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm22545-201ENSMUST00000104350 132 ntBASIC1.3□□□□□ -2.2
NcanP55066 Snord13-201ENSMUST00000157627 104 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm22336-201ENSMUST00000157719 107 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm23898-201ENSMUST00000158111 103 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm22476-201ENSMUST00000158902 100 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm25464-201ENSMUST00000175481 107 ntBASIC1.3□□□□□ -2.2
NcanP55066 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm22862-201ENSMUST00000178593 121 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm25936-201ENSMUST00000179952 114 ntBASIC1.3□□□□□ -2.2
NcanP55066 Mir7675-201ENSMUST00000184262 58 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm43602-201ENSMUST00000196772 300 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm5002-201ENSMUST00000207145 223 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm19790-201ENSMUST00000214414 251 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm22686-201ENSMUST00000082847 100 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm22704-201ENSMUST00000083027 137 ntBASIC1.3□□□□□ -2.2
NcanP55066 Gm23990-201ENSMUST00000117031 117 ntBASIC1.29□□□□□ -2.2
NcanP55066 Gm24895-201ENSMUST00000122742 74 ntBASIC1.29□□□□□ -2.2
NcanP55066 Gm24476-201ENSMUST00000157437 131 ntBASIC1.29□□□□□ -2.2
NcanP55066 Gm44483-201ENSMUST00000197203 97 ntBASIC1.29□□□□□ -2.2
NcanP55066 Gm44921-201ENSMUST00000205290 301 ntBASIC1.29□□□□□ -2.2
NcanP55066 Gm20734-201ENSMUST00000216939 193 ntBASIC1.29□□□□□ -2.2
NcanP55066 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.29□□□□□ -2.2
NcanP55066 Mir653-201ENSMUST00000102402 85 ntBASIC1.28□□□□□ -2.2
NcanP55066 Gm22557-201ENSMUST00000157804 102 ntBASIC1.28□□□□□ -2.2
NcanP55066 Gm25599-201ENSMUST00000157816 103 ntBASIC1.28□□□□□ -2.2
NcanP55066 Mir1931-201ENSMUST00000158589 119 ntBASIC1.28□□□□□ -2.2
NcanP55066 Gm26160-201ENSMUST00000158965 63 ntBASIC1.28□□□□□ -2.2
NcanP55066 Gm16404-201ENSMUST00000177739 468 ntBASIC1.28□□□□□ -2.2
NcanP55066 Gm14598-201ENSMUST00000180109 468 ntBASIC1.28□□□□□ -2.2
NcanP55066 Gm14625-201ENSMUST00000180231 468 ntBASIC1.28□□□□□ -2.2
NcanP55066 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.28□□□□□ -2.2
NcanP55066 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.28□□□□□ -2.2
NcanP55066 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.28□□□□□ -2.2
NcanP55066 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.28□□□□□ -2.2
NcanP55066 Mir490-201ENSMUST00000093567 84 ntBASIC1.28□□□□□ -2.2
NcanP55066 Mir544-201ENSMUST00000103813 78 ntBASIC1.27□□□□□ -2.21
NcanP55066 Gm25828-201ENSMUST00000157087 95 ntBASIC1.27□□□□□ -2.21
NcanP55066 Gm17528-201ENSMUST00000171026 239 ntBASIC1.27□□□□□ -2.21
NcanP55066 Gm24106-201ENSMUST00000175498 127 ntBASIC1.27□□□□□ -2.21
NcanP55066 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.27□□□□□ -2.21
NcanP55066 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC1.27□□□□□ -2.21
NcanP55066 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.27□□□□□ -2.21
NcanP55066 Gm44922-201ENSMUST00000206690 90 ntBASIC1.27□□□□□ -2.21
NcanP55066 Gm23531-201ENSMUST00000104567 68 ntBASIC1.26□□□□□ -2.21
NcanP55066 Gm6952-201ENSMUST00000118629 159 ntBASIC1.26□□□□□ -2.21
NcanP55066 Gm22842-201ENSMUST00000157709 118 ntBASIC1.26□□□□□ -2.21
NcanP55066 Gm22963-201ENSMUST00000157960 91 ntBASIC1.26□□□□□ -2.21
NcanP55066 Gm26038-201ENSMUST00000158151 106 ntBASIC1.26□□□□□ -2.21
NcanP55066 Mir5104-201ENSMUST00000175319 94 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms