Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm25044-201ENSMUST00000158603 104 ntBASIC0.81□□□□□ -2.28
Traf1P39428 Gm24225-201ENSMUST00000158825 98 ntBASIC0.81□□□□□ -2.28
Traf1P39428 Gm16307-201ENSMUST00000161269 210 ntBASIC0.81□□□□□ -2.28
Traf1P39428 Gm27585-201ENSMUST00000183717 199 ntBASIC0.81□□□□□ -2.28
Traf1P39428 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Traf1P39428 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.81□□□□□ -2.28
Traf1P39428 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.81□□□□□ -2.28
Traf1P39428 Gm23970-201ENSMUST00000083319 107 ntBASIC0.81□□□□□ -2.28
Traf1P39428 Mir216a-201ENSMUST00000083605 72 ntBASIC0.81□□□□□ -2.28
Traf1P39428 Mir146-201ENSMUST00000083667 65 ntBASIC0.81□□□□□ -2.28
Traf1P39428 Gm26293-201ENSMUST00000104170 84 ntBASIC0.8□□□□□ -2.28
Traf1P39428 Gm24747-201ENSMUST00000157835 87 ntBASIC0.8□□□□□ -2.28
Traf1P39428 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.8□□□□□ -2.28
Traf1P39428 Mir101a-201ENSMUST00000083517 83 ntBASIC0.8□□□□□ -2.28
Traf1P39428 Gm23060-201ENSMUST00000102345 109 ntBASIC0.79□□□□□ -2.28
Traf1P39428 Gm24559-201ENSMUST00000157519 121 ntBASIC0.79□□□□□ -2.28
Traf1P39428 Mir547-201ENSMUST00000102051 78 ntBASIC0.78□□□□□ -2.28
Traf1P39428 Gm25323-201ENSMUST00000122555 103 ntBASIC0.78□□□□□ -2.28
Traf1P39428 Gm22767-201ENSMUST00000158365 165 ntBASIC0.78□□□□□ -2.28
Traf1P39428 Gm24678-201ENSMUST00000158756 104 ntBASIC0.78□□□□□ -2.28
Traf1P39428 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.78□□□□□ -2.28
Traf1P39428 Gm25397-201ENSMUST00000176951 92 ntBASIC0.78□□□□□ -2.28
Traf1P39428 Gm28435-201ENSMUST00000185496 108 ntBASIC0.78□□□□□ -2.28
Traf1P39428 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Traf1P39428 Gm24616-201ENSMUST00000083274 139 ntBASIC0.78□□□□□ -2.28
Traf1P39428 Gm16265-201ENSMUST00000134558 108 ntBASIC0.77□□□□□ -2.29
Traf1P39428 Gm23375-201ENSMUST00000175407 83 ntBASIC0.77□□□□□ -2.29
Traf1P39428 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.77□□□□□ -2.29
Traf1P39428 Gm44464-201ENSMUST00000198010 138 ntBASIC0.77□□□□□ -2.29
Traf1P39428 Gm44909-201ENSMUST00000208756 165 ntBASIC0.77□□□□□ -2.29
Traf1P39428 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.77□□□□□ -2.29
Traf1P39428 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.77□□□□□ -2.29
Traf1P39428 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
Traf1P39428 Gm25362-201ENSMUST00000158854 105 ntBASIC0.76□□□□□ -2.29
Traf1P39428 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.76□□□□□ -2.29
Traf1P39428 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.75□□□□□ -2.29
Traf1P39428 Gm26026-201ENSMUST00000122726 123 ntBASIC0.75□□□□□ -2.29
Traf1P39428 Gm25828-201ENSMUST00000157087 95 ntBASIC0.75□□□□□ -2.29
Traf1P39428 Gm28020-201ENSMUST00000157739 67 ntBASIC0.75□□□□□ -2.29
Traf1P39428 Gm22801-201ENSMUST00000175624 84 ntBASIC0.75□□□□□ -2.29
Traf1P39428 Gm25378-201ENSMUST00000104333 129 ntBASIC0.74□□□□□ -2.29
Traf1P39428 Gm23841-201ENSMUST00000116951 114 ntBASIC0.74□□□□□ -2.29
Traf1P39428 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
Traf1P39428 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.74□□□□□ -2.29
Traf1P39428 Snora15-201ENSMUST00000177461 131 ntBASIC0.74□□□□□ -2.29
Traf1P39428 Gm36956-201ENSMUST00000193830 214 ntBASIC0.74□□□□□ -2.29
Traf1P39428 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.74□□□□□ -2.29
Traf1P39428 Gm26274-201ENSMUST00000157103 321 ntBASIC0.73□□□□□ -2.29
Traf1P39428 Gm22796-201ENSMUST00000157234 106 ntBASIC0.73□□□□□ -2.29
Traf1P39428 Gm25184-201ENSMUST00000157753 163 ntBASIC0.73□□□□□ -2.29
Traf1P39428 Gm22675-201ENSMUST00000158430 104 ntBASIC0.73□□□□□ -2.29
Traf1P39428 Gm6003-201ENSMUST00000187903 463 ntBASIC0.73□□□□□ -2.29
Traf1P39428 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Traf1P39428 Gm25015-201ENSMUST00000158400 128 ntBASIC0.72□□□□□ -2.29
Traf1P39428 Gm22433-201ENSMUST00000158550 142 ntBASIC0.72□□□□□ -2.29
Traf1P39428 Gm23047-201ENSMUST00000177661 94 ntBASIC0.72□□□□□ -2.29
Traf1P39428 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.72□□□□□ -2.29
Traf1P39428 Gm12686-201ENSMUST00000120546 397 ntBASIC0.71□□□□□ -2.3
Traf1P39428 Gm22145-201ENSMUST00000157396 148 ntBASIC0.71□□□□□ -2.3
Traf1P39428 Gm23977-201ENSMUST00000177871 74 ntBASIC0.71□□□□□ -2.3
Traf1P39428 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.71□□□□□ -2.3
Traf1P39428 Mir500-201ENSMUST00000093600 92 ntBASIC0.71□□□□□ -2.3
Traf1P39428 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Traf1P39428 Gm12815-201ENSMUST00000121737 135 ntBASIC0.7□□□□□ -2.3
Traf1P39428 Gm25390-201ENSMUST00000157341 103 ntBASIC0.7□□□□□ -2.3
Traf1P39428 Gm27476-201ENSMUST00000183366 104 ntBASIC0.7□□□□□ -2.3
Traf1P39428 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.7□□□□□ -2.3
Traf1P39428 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.7□□□□□ -2.3
Traf1P39428 Mir541-201ENSMUST00000102097 90 ntBASIC0.69□□□□□ -2.3
Traf1P39428 Gm25267-201ENSMUST00000158522 63 ntBASIC0.69□□□□□ -2.3
Traf1P39428 Gm22951-201ENSMUST00000179471 107 ntBASIC0.69□□□□□ -2.3
Traf1P39428 Gm27672-201ENSMUST00000183751 204 ntBASIC0.69□□□□□ -2.3
Traf1P39428 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
Traf1P39428 Gm44462-201ENSMUST00000199696 129 ntBASIC0.69□□□□□ -2.3
Traf1P39428 Mir384-201ENSMUST00000083565 88 ntBASIC0.69□□□□□ -2.3
Traf1P39428 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.69□□□□□ -2.3
Traf1P39428 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
Traf1P39428 Gm22786-201ENSMUST00000104086 122 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Snord19-201ENSMUST00000104609 76 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Mir669g-201ENSMUST00000116809 123 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Gm6897-201ENSMUST00000117714 138 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Gm14758-201ENSMUST00000119104 138 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Gm22482-201ENSMUST00000122563 359 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Gm23763-201ENSMUST00000158345 60 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Mir1933-201ENSMUST00000158930 88 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.68□□□□□ -2.3
Traf1P39428 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Mir6377-201ENSMUST00000183760 114 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Gm27332-201ENSMUST00000184893 112 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.68□□□□□ -2.3
Traf1P39428 Gm24121-201ENSMUST00000102029 106 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm25416-201ENSMUST00000104221 107 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Traf1P39428 Gm11936-201ENSMUST00000118323 160 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm25882-201ENSMUST00000157784 85 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm23853-201ENSMUST00000158375 104 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm25654-201ENSMUST00000158467 88 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm25241-201ENSMUST00000174909 84 ntBASIC0.67□□□□□ -2.3
Traf1P39428 Gm26217-201ENSMUST00000175212 84 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 514.3 ms