Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Mir6386-201ENSMUST00000183558 104 ntBASIC2.63□□□□□ -1.99
RaraP11416 Gm43722-201ENSMUST00000196054 124 ntBASIC2.63□□□□□ -1.99
RaraP11416 Gm6109-201ENSMUST00000223297 348 ntBASIC2.63□□□□□ -1.99
RaraP11416 Snora20-201ENSMUST00000082703 128 ntBASIC2.63□□□□□ -1.99
RaraP11416 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.63□□□□□ -1.99
RaraP11416 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RaraP11416 Gm24649-201ENSMUST00000157106 134 ntBASIC2.62□□□□□ -1.99
RaraP11416 Mir5118-201ENSMUST00000175551 67 ntBASIC2.62□□□□□ -1.99
RaraP11416 Gm24656-201ENSMUST00000177548 132 ntBASIC2.62□□□□□ -1.99
RaraP11416 Gm22069-201ENSMUST00000179911 107 ntBASIC2.62□□□□□ -1.99
RaraP11416 Gm44490-201ENSMUST00000198566 127 ntBASIC2.62□□□□□ -1.99
RaraP11416 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.62□□□□□ -1.99
RaraP11416 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.62□□□□□ -1.99
RaraP11416 Gm24697-201ENSMUST00000083881 107 ntBASIC2.62□□□□□ -1.99
RaraP11416 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RaraP11416 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RaraP11416 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RaraP11416 Gm26247-201ENSMUST00000116702 91 ntBASIC2.61□□□□□ -1.99
RaraP11416 Gm24851-201ENSMUST00000158028 103 ntBASIC2.61□□□□□ -1.99
RaraP11416 Gm23384-201ENSMUST00000158593 103 ntBASIC2.61□□□□□ -1.99
RaraP11416 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RaraP11416 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.61□□□□□ -1.99
RaraP11416 Gm22454-201ENSMUST00000082583 107 ntBASIC2.61□□□□□ -1.99
RaraP11416 Gm25636-201ENSMUST00000082666 133 ntBASIC2.61□□□□□ -1.99
RaraP11416 Gm23790-201ENSMUST00000083013 107 ntBASIC2.61□□□□□ -1.99
RaraP11416 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.61□□□□□ -1.99
RaraP11416 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RaraP11416 Gm22545-201ENSMUST00000104350 132 ntBASIC2.6□□□□□ -1.99
RaraP11416 Gm25680-201ENSMUST00000116917 126 ntBASIC2.6□□□□□ -1.99
RaraP11416 Gm22635-201ENSMUST00000116962 126 ntBASIC2.6□□□□□ -1.99
RaraP11416 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.6□□□□□ -1.99
RaraP11416 Gm22999-201ENSMUST00000157082 88 ntBASIC2.6□□□□□ -1.99
RaraP11416 Traj61-201ENSMUST00000165025 72 ntBASIC2.6□□□□□ -1.99
RaraP11416 Mir6388-201ENSMUST00000184417 75 ntBASIC2.6□□□□□ -1.99
RaraP11416 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
RaraP11416 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.6□□□□□ -1.99
RaraP11416 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
RaraP11416 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
RaraP11416 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
RaraP11416 Gm24049-201ENSMUST00000102409 100 ntBASIC2.59□□□□□ -1.99
RaraP11416 Gm22151-201ENSMUST00000116963 58 ntBASIC2.59□□□□□ -1.99
RaraP11416 Gm25996-201ENSMUST00000175393 117 ntBASIC2.59□□□□□ -1.99
RaraP11416 Mir3569-201ENSMUST00000185080 58 ntBASIC2.59□□□□□ -1.99
RaraP11416 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.59□□□□□ -1.99
RaraP11416 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.59□□□□□ -1.99
RaraP11416 Gm24524-201ENSMUST00000082925 170 ntBASIC2.59□□□□□ -1.99
RaraP11416 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.59□□□□□ -2
RaraP11416 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.58□□□□□ -2
RaraP11416 Gm22752-201ENSMUST00000102083 109 ntBASIC2.58□□□□□ -2
RaraP11416 Mir682-201ENSMUST00000102281 96 ntBASIC2.58□□□□□ -2
RaraP11416 Gm25045-201ENSMUST00000122670 99 ntBASIC2.58□□□□□ -2
RaraP11416 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.58□□□□□ -2
RaraP11416 Gm22963-201ENSMUST00000157960 91 ntBASIC2.58□□□□□ -2
RaraP11416 Gm22770-201ENSMUST00000158368 67 ntBASIC2.58□□□□□ -2
RaraP11416 Gm24816-201ENSMUST00000175311 151 ntBASIC2.58□□□□□ -2
RaraP11416 Gm22354-201ENSMUST00000083919 70 ntBASIC2.58□□□□□ -2
RaraP11416 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RaraP11416 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RaraP11416 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.57□□□□□ -2
RaraP11416 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.57□□□□□ -2
RaraP11416 Mir880-201ENSMUST00000104809 78 ntBASIC2.57□□□□□ -2
RaraP11416 Gm25270-201ENSMUST00000122606 138 ntBASIC2.57□□□□□ -2
RaraP11416 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.57□□□□□ -2
RaraP11416 Gm25153-201ENSMUST00000157118 156 ntBASIC2.57□□□□□ -2
RaraP11416 Gm26090-201ENSMUST00000157897 128 ntBASIC2.57□□□□□ -2
RaraP11416 Mir3069-201ENSMUST00000198802 65 ntBASIC2.57□□□□□ -2
RaraP11416 Gm45452-201ENSMUST00000210905 177 ntBASIC2.57□□□□□ -2
RaraP11416 Gm26494-201ENSMUST00000083154 143 ntBASIC2.57□□□□□ -2
RaraP11416 Gm24493-201ENSMUST00000083805 143 ntBASIC2.57□□□□□ -2
RaraP11416 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
RaraP11416 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.56□□□□□ -2
RaraP11416 Gm11856-201ENSMUST00000118712 276 ntBASIC2.56□□□□□ -2
RaraP11416 Gm24771-201ENSMUST00000158508 137 ntBASIC2.56□□□□□ -2
RaraP11416 Gm22947-201ENSMUST00000158559 91 ntBASIC2.56□□□□□ -2
RaraP11416 Gm42795-201ENSMUST00000198847 76 ntBASIC2.56□□□□□ -2
RaraP11416 Gm7214-201ENSMUST00000222428 272 ntBASIC2.56□□□□□ -2
RaraP11416 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RaraP11416 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
RaraP11416 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RaraP11416 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.55□□□□□ -2
RaraP11416 Gm22129-201ENSMUST00000179034 107 ntBASIC2.55□□□□□ -2
RaraP11416 Mir7013-201ENSMUST00000183540 72 ntBASIC2.55□□□□□ -2
RaraP11416 Gm43977-201ENSMUST00000203970 189 ntBASIC2.55□□□□□ -2
RaraP11416 Mir451a-201ENSMUST00000093557 72 ntBASIC2.55□□□□□ -2
RaraP11416 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.55□□□□□ -2
RaraP11416 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.55□□□□□ -2
RaraP11416 Gm24122-201ENSMUST00000104107 132 ntBASIC2.54□□□□□ -2
RaraP11416 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.54□□□□□ -2
RaraP11416 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.54□□□□□ -2
RaraP11416 Gm26280-201ENSMUST00000157096 101 ntBASIC2.54□□□□□ -2
RaraP11416 Gm22227-201ENSMUST00000157356 259 ntBASIC2.54□□□□□ -2
RaraP11416 Gm22515-201ENSMUST00000158273 305 ntBASIC2.54□□□□□ -2
RaraP11416 Gm22500-201ENSMUST00000158982 99 ntBASIC2.54□□□□□ -2
RaraP11416 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.54□□□□□ -2
RaraP11416 AC158598.2-201ENSMUST00000213397 3832 ntBASIC2.54□□□□□ -2
RaraP11416 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.54□□□□□ -2
RaraP11416 Gm24313-201ENSMUST00000082561 133 ntBASIC2.54□□□□□ -2
RaraP11416 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.53□□□□□ -2
RaraP11416 Mir542-201ENSMUST00000102186 85 ntBASIC2.53□□□□□ -2
RaraP11416 Gm22782-201ENSMUST00000104082 132 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 147.9 ms