Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm26497-201ENSMUST00000083146 107 ntBASIC0.15□□□□□ -2.39
Chmp6P0C0A3 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.14□□□□□ -2.39
Chmp6P0C0A3 Gm24509-201ENSMUST00000157086 101 ntBASIC0.14□□□□□ -2.39
Chmp6P0C0A3 Gm25358-201ENSMUST00000157189 101 ntBASIC0.14□□□□□ -2.39
Chmp6P0C0A3 Mir3108-201ENSMUST00000175500 79 ntBASIC0.14□□□□□ -2.39
Chmp6P0C0A3 Mir7010-201ENSMUST00000183464 63 ntBASIC0.14□□□□□ -2.39
Chmp6P0C0A3 Gm27402-201ENSMUST00000183890 120 ntBASIC0.14□□□□□ -2.39
Chmp6P0C0A3 Gm23060-201ENSMUST00000102345 109 ntBASIC0.13□□□□□ -2.39
Chmp6P0C0A3 Gm24635-201ENSMUST00000122712 128 ntBASIC0.13□□□□□ -2.39
Chmp6P0C0A3 Gm22520-201ENSMUST00000158269 129 ntBASIC0.13□□□□□ -2.39
Chmp6P0C0A3 Gm25024-201ENSMUST00000179667 104 ntBASIC0.13□□□□□ -2.39
Chmp6P0C0A3 Gm42594-201ENSMUST00000199511 246 ntBASIC0.13□□□□□ -2.39
Chmp6P0C0A3 Gm3702-201ENSMUST00000211754 346 ntBASIC0.13□□□□□ -2.39
Chmp6P0C0A3 Gm26123-201ENSMUST00000083363 135 ntBASIC0.13□□□□□ -2.39
Chmp6P0C0A3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Chmp6P0C0A3 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
Chmp6P0C0A3 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm23941-201ENSMUST00000101953 107 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm25828-201ENSMUST00000157087 95 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm25494-201ENSMUST00000158143 100 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm24728-201ENSMUST00000158226 125 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm22767-201ENSMUST00000158365 165 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm25718-201ENSMUST00000158632 118 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm27980-201ENSMUST00000184094 169 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm29140-201ENSMUST00000190187 476 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm44457-201ENSMUST00000198109 76 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Mir7227-201ENSMUST00000200408 59 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 AC192333.1-201ENSMUST00000224573 376 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Gm22576-201ENSMUST00000083733 104 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 Mir532-201ENSMUST00000093630 96 ntBASIC0.12□□□□□ -2.39
Chmp6P0C0A3 AC154552.1-201ENSMUST00000222969 202 ntBASIC0.11□□□□□ -2.39
Chmp6P0C0A3 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.11□□□□□ -2.39
Chmp6P0C0A3 Gm26076-201ENSMUST00000104065 105 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Gm24555-201ENSMUST00000104548 124 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Gm12797-201ENSMUST00000118645 273 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Gm16186-201ENSMUST00000120132 216 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Gm25664-201ENSMUST00000157697 107 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Gm24392-201ENSMUST00000158136 103 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Gm24667-201ENSMUST00000158938 103 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Gm25952-201ENSMUST00000175329 74 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Mir6390-201ENSMUST00000184405 129 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Gm25634-201ENSMUST00000082667 105 ntBASIC0.1□□□□□ -2.39
Chmp6P0C0A3 Gm22784-201ENSMUST00000104088 132 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 Gm12924-201ENSMUST00000121747 318 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 Gm13797-201ENSMUST00000121792 120 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 Gm25323-201ENSMUST00000122555 103 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 Gm23655-201ENSMUST00000122627 105 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 Gm26287-201ENSMUST00000158887 81 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 Mir200a-201ENSMUST00000083466 90 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 Gm22753-201ENSMUST00000083657 107 ntBASIC0.09□□□□□ -2.4
Chmp6P0C0A3 Gm23761-201ENSMUST00000158347 104 ntBASIC0.08□□□□□ -2.4
Chmp6P0C0A3 Gm44977-201ENSMUST00000205283 420 ntBASIC0.08□□□□□ -2.4
Chmp6P0C0A3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.08□□□□□ -2.4
Chmp6P0C0A3 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
Chmp6P0C0A3 Gm22080-201ENSMUST00000157591 106 ntBASIC0.07□□□□□ -2.4
Chmp6P0C0A3 Gm26402-201ENSMUST00000158499 113 ntBASIC0.07□□□□□ -2.4
Chmp6P0C0A3 Gm27521-201ENSMUST00000184022 64 ntBASIC0.07□□□□□ -2.4
Chmp6P0C0A3 Mir7229-201ENSMUST00000197062 53 ntBASIC0.07□□□□□ -2.4
Chmp6P0C0A3 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC0.07□□□□□ -2.4
Chmp6P0C0A3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.07□□□□□ -2.4
Chmp6P0C0A3 Gm25444-201ENSMUST00000158999 113 ntBASIC0.06□□□□□ -2.4
Chmp6P0C0A3 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Chmp6P0C0A3 Gm22686-201ENSMUST00000082847 100 ntBASIC0.06□□□□□ -2.4
Chmp6P0C0A3 Gm22051-201ENSMUST00000117002 127 ntBASIC0.05□□□□□ -2.4
Chmp6P0C0A3 Gm23406-201ENSMUST00000082537 122 ntBASIC0.05□□□□□ -2.4
Chmp6P0C0A3 Gm22571-201ENSMUST00000082984 70 ntBASIC0.05□□□□□ -2.4
Chmp6P0C0A3 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.04□□□□□ -2.4
Chmp6P0C0A3 Gm25611-201ENSMUST00000104017 133 ntBASIC0.04□□□□□ -2.4
Chmp6P0C0A3 Mir100-201ENSMUST00000175270 80 ntBASIC0.04□□□□□ -2.4
Chmp6P0C0A3 Gm44468-201ENSMUST00000199516 105 ntBASIC0.04□□□□□ -2.4
Chmp6P0C0A3 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
Chmp6P0C0A3 Gm25787-201ENSMUST00000104709 92 ntBASIC0.03□□□□□ -2.4
Chmp6P0C0A3 Gm23821-201ENSMUST00000158738 106 ntBASIC0.03□□□□□ -2.4
Chmp6P0C0A3 Gm44490-201ENSMUST00000198566 127 ntBASIC0.03□□□□□ -2.4
Chmp6P0C0A3 Gm24423-201ENSMUST00000101982 106 ntBASIC0.02□□□□□ -2.41
Chmp6P0C0A3 Gm6952-201ENSMUST00000118629 159 ntBASIC0.02□□□□□ -2.41
Chmp6P0C0A3 Gm22999-201ENSMUST00000157082 88 ntBASIC0.02□□□□□ -2.41
Chmp6P0C0A3 Gm28008-201ENSMUST00000184021 186 ntBASIC0.02□□□□□ -2.41
Chmp6P0C0A3 Gm44455-201ENSMUST00000200061 82 ntBASIC0.02□□□□□ -2.41
Chmp6P0C0A3 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.02□□□□□ -2.41
Chmp6P0C0A3 Gm45313-201ENSMUST00000210584 178 ntBASIC0.02□□□□□ -2.41
Chmp6P0C0A3 Gm26293-201ENSMUST00000104170 84 ntBASIC0.01□□□□□ -2.41
Chmp6P0C0A3 Gm11904-201ENSMUST00000120562 248 ntBASIC0.01□□□□□ -2.41
Chmp6P0C0A3 Gm23219-201ENSMUST00000158123 87 ntBASIC0.01□□□□□ -2.41
Chmp6P0C0A3 Gm25771-201ENSMUST00000158565 144 ntBASIC0.01□□□□□ -2.41
Chmp6P0C0A3 Gm25235-201ENSMUST00000179933 107 ntBASIC0.01□□□□□ -2.41
Chmp6P0C0A3 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
Chmp6P0C0A3 Gm26447-201ENSMUST00000082448 129 ntBASIC0.01□□□□□ -2.41
Chmp6P0C0A3 Gm26159-201ENSMUST00000158968 104 ntBASIC0□□□□□ -2.41
Chmp6P0C0A3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0□□□□□ -2.41
Chmp6P0C0A3 Mir669k-201ENSMUST00000177742 127 ntBASIC0□□□□□ -2.41
Chmp6P0C0A3 Gm25673-201ENSMUST00000179957 127 ntBASIC0□□□□□ -2.41
Chmp6P0C0A3 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC0□□□□□ -2.41
Chmp6P0C0A3 Mir8107-201ENSMUST00000184024 117 ntBASIC0□□□□□ -2.41
Chmp6P0C0A3 Snord95-201ENSMUST00000082846 68 ntBASIC0□□□□□ -2.41
Chmp6P0C0A3 Gm10222-201ENSMUST00000088336 294 ntBASIC0□□□□□ -2.41
Chmp6P0C0A3 Mir670-201ENSMUST00000102380 100 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 153.6 ms