Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Gm22767-201ENSMUST00000158365 165 ntBASIC0.66□□□□□ -2.3
NefmP08553 Gm26402-201ENSMUST00000158499 113 ntBASIC0.66□□□□□ -2.3
NefmP08553 Gm27289-201ENSMUST00000183341 82 ntBASIC0.66□□□□□ -2.3
NefmP08553 Mir6336-201ENSMUST00000183581 130 ntBASIC0.66□□□□□ -2.3
NefmP08553 Gm11204-201ENSMUST00000122438 147 ntBASIC0.65□□□□□ -2.31
NefmP08553 Gm22482-201ENSMUST00000122563 359 ntBASIC0.65□□□□□ -2.31
NefmP08553 Gm24724-201ENSMUST00000158230 107 ntBASIC0.65□□□□□ -2.31
NefmP08553 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.65□□□□□ -2.31
NefmP08553 Gm44490-201ENSMUST00000198566 127 ntBASIC0.65□□□□□ -2.31
NefmP08553 Mir500-201ENSMUST00000093600 92 ntBASIC0.65□□□□□ -2.31
NefmP08553 Gm26293-201ENSMUST00000104170 84 ntBASIC0.64□□□□□ -2.31
NefmP08553 Gm23581-201ENSMUST00000158531 63 ntBASIC0.64□□□□□ -2.31
NefmP08553 Gm25110-201ENSMUST00000116684 121 ntBASIC0.63□□□□□ -2.31
NefmP08553 Gm25775-201ENSMUST00000116716 121 ntBASIC0.63□□□□□ -2.31
NefmP08553 Gm24795-201ENSMUST00000116737 121 ntBASIC0.63□□□□□ -2.31
NefmP08553 Gm25171-201ENSMUST00000116926 121 ntBASIC0.63□□□□□ -2.31
NefmP08553 Gm14792-201ENSMUST00000119725 258 ntBASIC0.63□□□□□ -2.31
NefmP08553 Gm25323-201ENSMUST00000122555 103 ntBASIC0.63□□□□□ -2.31
NefmP08553 Gm23466-201ENSMUST00000157133 106 ntBASIC0.63□□□□□ -2.31
NefmP08553 Gm25882-201ENSMUST00000157784 85 ntBASIC0.63□□□□□ -2.31
NefmP08553 Mir1933-201ENSMUST00000158930 88 ntBASIC0.63□□□□□ -2.31
NefmP08553 Mir3970-201ENSMUST00000199287 90 ntBASIC0.63□□□□□ -2.31
NefmP08553 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.63□□□□□ -2.31
NefmP08553 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.63□□□□□ -2.31
NefmP08553 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.63□□□□□ -2.31
NefmP08553 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.63□□□□□ -2.31
NefmP08553 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
NefmP08553 Gm23605-201ENSMUST00000157255 127 ntBASIC0.62□□□□□ -2.31
NefmP08553 Mir6377-201ENSMUST00000183760 114 ntBASIC0.62□□□□□ -2.31
NefmP08553 Gm44488-201ENSMUST00000199467 119 ntBASIC0.62□□□□□ -2.31
NefmP08553 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.62□□□□□ -2.31
NefmP08553 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.62□□□□□ -2.31
NefmP08553 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.62□□□□□ -2.31
NefmP08553 Mir30a-201ENSMUST00000083471 71 ntBASIC0.62□□□□□ -2.31
NefmP08553 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.62□□□□□ -2.31
NefmP08553 Gm24594-201ENSMUST00000122502 99 ntBASIC0.61□□□□□ -2.31
NefmP08553 Gm23853-201ENSMUST00000158375 104 ntBASIC0.61□□□□□ -2.31
NefmP08553 Gm23416-201ENSMUST00000175520 95 ntBASIC0.61□□□□□ -2.31
NefmP08553 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.61□□□□□ -2.31
NefmP08553 Gm44464-201ENSMUST00000198010 138 ntBASIC0.61□□□□□ -2.31
NefmP08553 Gm24258-201ENSMUST00000083739 133 ntBASIC0.61□□□□□ -2.31
NefmP08553 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
NefmP08553 Gm25828-201ENSMUST00000157087 95 ntBASIC0.6□□□□□ -2.31
NefmP08553 Gm44462-201ENSMUST00000199696 129 ntBASIC0.6□□□□□ -2.31
NefmP08553 Gm22358-201ENSMUST00000082877 122 ntBASIC0.6□□□□□ -2.31
NefmP08553 Gm25188-201ENSMUST00000083913 122 ntBASIC0.6□□□□□ -2.31
NefmP08553 Gm25416-201ENSMUST00000104221 107 ntBASIC0.59□□□□□ -2.31
NefmP08553 Gm44211-201ENSMUST00000204867 145 ntBASIC0.59□□□□□ -2.31
NefmP08553 Gm22469-201ENSMUST00000104118 133 ntBASIC0.58□□□□□ -2.32
NefmP08553 Gm26285-201ENSMUST00000177923 107 ntBASIC0.58□□□□□ -2.32
NefmP08553 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
NefmP08553 Gm8219-201ENSMUST00000218309 242 ntBASIC0.58□□□□□ -2.32
NefmP08553 Gm23622-201ENSMUST00000082460 107 ntBASIC0.58□□□□□ -2.32
NefmP08553 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
NefmP08553 Gm14884-201ENSMUST00000120456 196 ntBASIC0.57□□□□□ -2.32
NefmP08553 Gm6272-201ENSMUST00000121256 171 ntBASIC0.57□□□□□ -2.32
NefmP08553 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.57□□□□□ -2.32
NefmP08553 Gm25241-201ENSMUST00000174909 84 ntBASIC0.57□□□□□ -2.32
NefmP08553 Gm26217-201ENSMUST00000175212 84 ntBASIC0.57□□□□□ -2.32
NefmP08553 Gm23321-201ENSMUST00000104465 126 ntBASIC0.56□□□□□ -2.32
NefmP08553 Gm6985-201ENSMUST00000121255 271 ntBASIC0.56□□□□□ -2.32
NefmP08553 Gm25935-201ENSMUST00000178746 107 ntBASIC0.56□□□□□ -2.32
NefmP08553 Gm38019-201ENSMUST00000195133 380 ntBASIC0.56□□□□□ -2.32
NefmP08553 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
NefmP08553 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.55□□□□□ -2.32
NefmP08553 Gm23126-201ENSMUST00000104260 134 ntBASIC0.55□□□□□ -2.32
NefmP08553 Gm26026-201ENSMUST00000122726 123 ntBASIC0.55□□□□□ -2.32
NefmP08553 Gm25771-201ENSMUST00000158565 144 ntBASIC0.55□□□□□ -2.32
NefmP08553 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.55□□□□□ -2.32
NefmP08553 Gm37997-201ENSMUST00000193515 267 ntBASIC0.55□□□□□ -2.32
NefmP08553 Gm43944-201ENSMUST00000205220 120 ntBASIC0.55□□□□□ -2.32
NefmP08553 Gm23347-201ENSMUST00000083823 82 ntBASIC0.55□□□□□ -2.32
NefmP08553 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
NefmP08553 Gm25787-201ENSMUST00000104709 92 ntBASIC0.54□□□□□ -2.32
NefmP08553 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.54□□□□□ -2.32
NefmP08553 Gm23672-201ENSMUST00000157471 107 ntBASIC0.54□□□□□ -2.32
NefmP08553 Mir7079-201ENSMUST00000184697 69 ntBASIC0.54□□□□□ -2.32
NefmP08553 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
NefmP08553 Gm24549-201ENSMUST00000158647 139 ntBASIC0.53□□□□□ -2.32
NefmP08553 Gm27585-201ENSMUST00000183717 199 ntBASIC0.53□□□□□ -2.32
NefmP08553 Gm27672-201ENSMUST00000183751 204 ntBASIC0.53□□□□□ -2.32
NefmP08553 Gm24460-201ENSMUST00000082731 106 ntBASIC0.53□□□□□ -2.32
NefmP08553 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.52□□□□□ -2.33
NefmP08553 Gm25318-201ENSMUST00000122554 314 ntBASIC0.52□□□□□ -2.33
NefmP08553 Gm22466-201ENSMUST00000175278 69 ntBASIC0.52□□□□□ -2.33
NefmP08553 Gm26123-201ENSMUST00000083363 135 ntBASIC0.52□□□□□ -2.33
NefmP08553 Gm25393-201ENSMUST00000157336 285 ntBASIC0.51□□□□□ -2.33
NefmP08553 Gm25720-201ENSMUST00000157503 105 ntBASIC0.51□□□□□ -2.33
NefmP08553 Gm24547-201ENSMUST00000158649 149 ntBASIC0.51□□□□□ -2.33
NefmP08553 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.51□□□□□ -2.33
NefmP08553 Gm25814-201ENSMUST00000082754 107 ntBASIC0.51□□□□□ -2.33
NefmP08553 Mir146-201ENSMUST00000083667 65 ntBASIC0.51□□□□□ -2.33
NefmP08553 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.5□□□□□ -2.33
NefmP08553 Gm24509-201ENSMUST00000157086 101 ntBASIC0.5□□□□□ -2.33
NefmP08553 Gm25358-201ENSMUST00000157189 101 ntBASIC0.5□□□□□ -2.33
NefmP08553 Gm25494-201ENSMUST00000158143 100 ntBASIC0.5□□□□□ -2.33
NefmP08553 Gm44828-201ENSMUST00000203745 106 ntBASIC0.5□□□□□ -2.33
NefmP08553 Gm23140-201ENSMUST00000082487 107 ntBASIC0.5□□□□□ -2.33
NefmP08553 Gm23679-201ENSMUST00000083161 119 ntBASIC0.5□□□□□ -2.33
NefmP08553 Mir384-201ENSMUST00000083565 88 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 173.9 ms