Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm24468-201ENSMUST00000104489 104 ntBASIC2.06□□□□□ -2.08
Pcdh1F7BJK1 Gm11792-201ENSMUST00000120640 168 ntBASIC2.06□□□□□ -2.08
Pcdh1F7BJK1 Gm24937-201ENSMUST00000122597 134 ntBASIC2.06□□□□□ -2.08
Pcdh1F7BJK1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.06□□□□□ -2.08
Pcdh1F7BJK1 Gm45268-201ENSMUST00000210046 370 ntBASIC2.06□□□□□ -2.08
Pcdh1F7BJK1 Snora3-201ENSMUST00000083082 132 ntBASIC2.06□□□□□ -2.08
Pcdh1F7BJK1 Mir93-201ENSMUST00000083593 88 ntBASIC2.06□□□□□ -2.08
Pcdh1F7BJK1 Mir880-201ENSMUST00000104809 78 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 Gm11856-201ENSMUST00000118712 276 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 Gm22517-201ENSMUST00000158265 136 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 Gm23005-201ENSMUST00000158950 136 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 Gm23963-201ENSMUST00000179603 77 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 Gm22638-201ENSMUST00000179674 107 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 Gm44320-201ENSMUST00000199276 86 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 Gm24044-201ENSMUST00000083107 156 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.05□□□□□ -2.08
Pcdh1F7BJK1 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Gm24238-201ENSMUST00000157792 98 ntBASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Gm23083-201ENSMUST00000157851 116 ntBASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Gm26090-201ENSMUST00000157897 128 ntBASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Gm24769-201ENSMUST00000158506 129 ntBASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Gm25368-201ENSMUST00000158847 131 ntBASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 AC124687.1-201ENSMUST00000221868 189 ntBASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Pcdh1F7BJK1 Gm22772-201ENSMUST00000104451 121 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Gm24907-201ENSMUST00000116932 128 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Gm24900-201ENSMUST00000158128 134 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Gm25866-201ENSMUST00000158245 112 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Gm24922-201ENSMUST00000158511 102 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Gm22500-201ENSMUST00000158982 99 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Mir3076-201ENSMUST00000175415 60 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Gm44932-201ENSMUST00000206799 121 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Snora41-201ENSMUST00000082668 132 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Snord7-201ENSMUST00000083781 97 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Mir451a-201ENSMUST00000093557 72 ntBASIC2.03□□□□□ -2.08
Pcdh1F7BJK1 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Pcdh1F7BJK1 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Pcdh1F7BJK1 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.02□□□□□ -2.09
Pcdh1F7BJK1 Gm25090-201ENSMUST00000104000 132 ntBASIC2.02□□□□□ -2.09
Pcdh1F7BJK1 Gm22999-201ENSMUST00000157082 88 ntBASIC2.02□□□□□ -2.09
Pcdh1F7BJK1 Gm23996-201ENSMUST00000158062 131 ntBASIC2.02□□□□□ -2.09
Pcdh1F7BJK1 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.02□□□□□ -2.09
Pcdh1F7BJK1 Gm43865-201ENSMUST00000204721 127 ntBASIC2.02□□□□□ -2.09
Pcdh1F7BJK1 Mir300-201ENSMUST00000083485 79 ntBASIC2.02□□□□□ -2.09
Pcdh1F7BJK1 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.02□□□□□ -2.09
Pcdh1F7BJK1 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 Snord78-201ENSMUST00000104032 66 ntBASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 Gm22664-201ENSMUST00000158719 105 ntBASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 Gm24816-201ENSMUST00000175311 151 ntBASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.01□□□□□ -2.09
Pcdh1F7BJK1 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2□□□□□ -2.09
Pcdh1F7BJK1 Gm19194-201ENSMUST00000192015 3774 ntBASIC2□□□□□ -2.09
Pcdh1F7BJK1 Gm14674-201ENSMUST00000117816 342 ntBASIC2□□□□□ -2.09
Pcdh1F7BJK1 Gm25707-201ENSMUST00000175120 96 ntBASIC2□□□□□ -2.09
Pcdh1F7BJK1 Mir3075-201ENSMUST00000175340 85 ntBASIC2□□□□□ -2.09
Pcdh1F7BJK1 Gm27979-201ENSMUST00000185126 56 ntBASIC2□□□□□ -2.09
Pcdh1F7BJK1 Mir7217-201ENSMUST00000200304 62 ntBASIC2□□□□□ -2.09
Pcdh1F7BJK1 Snora69-201ENSMUST00000083708 131 ntBASIC2□□□□□ -2.09
Pcdh1F7BJK1 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2□□□□□ -2.09
Pcdh1F7BJK1 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.99□□□□□ -2.09
Pcdh1F7BJK1 Mir3086-201ENSMUST00000175072 87 ntBASIC1.99□□□□□ -2.09
Pcdh1F7BJK1 Gm25750-201ENSMUST00000175483 112 ntBASIC1.99□□□□□ -2.09
Pcdh1F7BJK1 Gm28900-201ENSMUST00000185232 156 ntBASIC1.99□□□□□ -2.09
Pcdh1F7BJK1 Gm45471-201ENSMUST00000211270 281 ntBASIC1.99□□□□□ -2.09
Pcdh1F7BJK1 Gm24698-201ENSMUST00000083883 130 ntBASIC1.99□□□□□ -2.09
Pcdh1F7BJK1 Gm25022-201ENSMUST00000102205 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Gm23803-201ENSMUST00000104610 132 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Gm26213-201ENSMUST00000158582 110 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Snord43-201ENSMUST00000199549 108 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1.98□□□□□ -2.09
Pcdh1F7BJK1 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Pcdh1F7BJK1 Gm24122-201ENSMUST00000104107 132 ntBASIC1.97□□□□□ -2.09
Pcdh1F7BJK1 Gm24947-201ENSMUST00000158334 110 ntBASIC1.97□□□□□ -2.09
Pcdh1F7BJK1 Gm22093-201ENSMUST00000158980 111 ntBASIC1.97□□□□□ -2.09
Pcdh1F7BJK1 Mir7068-201ENSMUST00000183439 74 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 133.7 ms