Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Gm25473-201ENSMUST00000180191 107 ntBASIC0.38□□□□□ -2.35
Scn2aA0A0J9YTW6 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm24856-201ENSMUST00000082809 107 ntBASIC0.38□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm26071-201ENSMUST00000083261 107 ntBASIC0.38□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm24521-201ENSMUST00000083958 107 ntBASIC0.38□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.38□□□□□ -2.35
Scn2aA0A0J9YTW6 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Snord89-201ENSMUST00000104516 110 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm12797-201ENSMUST00000118645 273 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm11904-201ENSMUST00000120562 248 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm26152-201ENSMUST00000157427 101 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm25769-201ENSMUST00000158569 127 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm43432-201ENSMUST00000196352 121 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm7240-201ENSMUST00000220769 664 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm24764-201ENSMUST00000083686 199 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm24793-201ENSMUST00000104289 132 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm22984-201ENSMUST00000122751 122 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm22796-201ENSMUST00000157234 106 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm22387-201ENSMUST00000158191 131 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm36189-201ENSMUST00000204113 523 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Snora20-201ENSMUST00000082703 128 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Mir451a-201ENSMUST00000093557 72 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 Mir362-201ENSMUST00000093592 65 ntBASIC0.37□□□□□ -2.35
Scn2aA0A0J9YTW6 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.36□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.36□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm25267-201ENSMUST00000158522 63 ntBASIC0.36□□□□□ -2.35
Scn2aA0A0J9YTW6 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm44959-201ENSMUST00000209127 231 ntBASIC0.36□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm25135-201ENSMUST00000082648 143 ntBASIC0.36□□□□□ -2.35
Scn2aA0A0J9YTW6 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm14906-201ENSMUST00000119265 390 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm22522-201ENSMUST00000158271 151 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm22983-201ENSMUST00000158308 104 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm26287-201ENSMUST00000158887 81 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Mir6389-201ENSMUST00000183661 102 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm22051-201ENSMUST00000117002 127 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm12924-201ENSMUST00000121747 318 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm23375-201ENSMUST00000175407 83 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Mir324-201ENSMUST00000083600 89 ntBASIC0.35□□□□□ -2.35
Scn2aA0A0J9YTW6 Gm26338-201ENSMUST00000102372 110 ntBASIC0.34□□□□□ -2.36
Scn2aA0A0J9YTW6 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.34□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm10172-201ENSMUST00000085929 558 ntBASIC0.34□□□□□ -2.36
Scn2aA0A0J9YTW6 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm24423-201ENSMUST00000101982 106 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm15289-201ENSMUST00000117793 244 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm14946-201ENSMUST00000119859 296 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir1933-201ENSMUST00000158930 88 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm25024-201ENSMUST00000179667 104 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir6951-201ENSMUST00000183910 75 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm27717-201ENSMUST00000183933 151 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir3970-201ENSMUST00000199287 90 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.33□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm14039-201ENSMUST00000118705 101 ntBASIC0.32□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm25828-201ENSMUST00000157087 95 ntBASIC0.32□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm23672-201ENSMUST00000157471 107 ntBASIC0.32□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm27521-201ENSMUST00000184022 64 ntBASIC0.32□□□□□ -2.36
Scn2aA0A0J9YTW6 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm22571-201ENSMUST00000082984 70 ntBASIC0.32□□□□□ -2.36
Scn2aA0A0J9YTW6 Snord100-201ENSMUST00000116836 74 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm25393-201ENSMUST00000157336 285 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm26090-201ENSMUST00000157897 128 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir6350-201ENSMUST00000183639 105 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm6003-201ENSMUST00000187903 463 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm44488-201ENSMUST00000199467 119 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm19790-201ENSMUST00000214414 251 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm23655-201ENSMUST00000122627 105 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm24678-201ENSMUST00000158756 104 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm27585-201ENSMUST00000183717 199 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm27747-201ENSMUST00000184707 85 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm36956-201ENSMUST00000193830 214 ntBASIC0.31□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm14884-201ENSMUST00000120456 196 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm23853-201ENSMUST00000158375 104 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm23020-201ENSMUST00000158766 253 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir669a-7-201ENSMUST00000180364 87 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm44373-201ENSMUST00000196112 169 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir669a-6-201ENSMUST00000196127 87 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir669a-12-201ENSMUST00000197274 87 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir669a-5-201ENSMUST00000197439 87 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir669a-10-201ENSMUST00000197745 87 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir669a-11-201ENSMUST00000197952 87 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir669a-4-201ENSMUST00000198665 87 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir669a-9-201ENSMUST00000200087 87 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Mir669a-8-201ENSMUST00000200268 87 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 AC158981.3-202ENSMUST00000228906 523 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm26497-201ENSMUST00000083146 107 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm25885-201ENSMUST00000157779 109 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm22088-201ENSMUST00000158341 117 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm43505-201ENSMUST00000200579 139 ntBASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Scn2aA0A0J9YTW6 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 171.7 ms