Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Mir500-201ENSMUST00000093600 92 ntBASIC0.52□□□□□ -2.33
Ighv1-20A0A0A6YX66 Mir547-201ENSMUST00000102051 78 ntBASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm24342-201ENSMUST00000103907 104 ntBASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm12837-201ENSMUST00000120131 373 ntBASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm14883-201ENSMUST00000120179 157 ntBASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Mir1933-201ENSMUST00000158930 88 ntBASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm25241-201ENSMUST00000174909 84 ntBASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm26217-201ENSMUST00000175212 84 ntBASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Mir7039-201ENSMUST00000183852 85 ntBASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Rny1-201ENSMUST00000083767 112 ntBASIC0.51□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.5□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm26293-201ENSMUST00000104170 84 ntBASIC0.5□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm16265-201ENSMUST00000134558 108 ntBASIC0.5□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm27905-201ENSMUST00000184005 207 ntBASIC0.5□□□□□ -2.33
Ighv1-20A0A0A6YX66 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.5□□□□□ -2.33
Ighv1-20A0A0A6YX66 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.5□□□□□ -2.33
Ighv1-20A0A0A6YX66 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.49□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm23008-201ENSMUST00000158946 80 ntBASIC0.49□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm27585-201ENSMUST00000183717 199 ntBASIC0.49□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm25138-201ENSMUST00000083248 136 ntBASIC0.49□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm24929-201ENSMUST00000083403 139 ntBASIC0.49□□□□□ -2.33
Ighv1-20A0A0A6YX66 Mir216a-201ENSMUST00000083605 72 ntBASIC0.49□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm22786-201ENSMUST00000104086 122 ntBASIC0.48□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm26026-201ENSMUST00000122726 123 ntBASIC0.48□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm23853-201ENSMUST00000158375 104 ntBASIC0.48□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm27672-201ENSMUST00000183751 204 ntBASIC0.48□□□□□ -2.33
Ighv1-20A0A0A6YX66 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm44488-201ENSMUST00000199467 119 ntBASIC0.48□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm24527-201ENSMUST00000082920 107 ntBASIC0.48□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm22482-201ENSMUST00000122563 359 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm25882-201ENSMUST00000157784 85 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm22522-201ENSMUST00000158271 151 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm25267-201ENSMUST00000158522 63 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm24547-201ENSMUST00000158649 149 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Gm27289-201ENSMUST00000183341 82 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 mt-Ti-201ENSMUST00000082393 69 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Mir30a-201ENSMUST00000083471 71 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Mir384-201ENSMUST00000083565 88 ntBASIC0.47□□□□□ -2.33
Ighv1-20A0A0A6YX66 Mir881-201ENSMUST00000104844 78 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm25110-201ENSMUST00000116684 121 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm25775-201ENSMUST00000116716 121 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm24795-201ENSMUST00000116737 121 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm25171-201ENSMUST00000116926 121 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm14946-201ENSMUST00000119859 296 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm25720-201ENSMUST00000157503 105 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm23763-201ENSMUST00000158345 60 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm26236-201ENSMUST00000175536 137 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Mir6377-201ENSMUST00000183760 114 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm6003-201ENSMUST00000187903 463 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm8219-201ENSMUST00000218309 242 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 AC165157.3-201ENSMUST00000220815 103 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Mir146-201ENSMUST00000083667 65 ntBASIC0.46□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm6272-201ENSMUST00000121256 171 ntBASIC0.45□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm12815-201ENSMUST00000121737 135 ntBASIC0.45□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm25771-201ENSMUST00000158565 144 ntBASIC0.45□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm25397-201ENSMUST00000176951 92 ntBASIC0.45□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm22887-201ENSMUST00000178586 107 ntBASIC0.45□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm19790-201ENSMUST00000214414 251 ntBASIC0.45□□□□□ -2.34
Ighv1-20A0A0A6YX66 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm25509-201ENSMUST00000116985 106 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm13577-201ENSMUST00000121365 205 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm22999-201ENSMUST00000157082 88 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm26484-201ENSMUST00000158018 106 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm23416-201ENSMUST00000175520 95 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm26123-201ENSMUST00000083363 135 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Mir200b-201ENSMUST00000083615 70 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Mir218-1-201ENSMUST00000083669 110 ntBASIC0.44□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm26076-201ENSMUST00000104065 105 ntBASIC0.43□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm6985-201ENSMUST00000121255 271 ntBASIC0.43□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm24509-201ENSMUST00000157086 101 ntBASIC0.43□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm25358-201ENSMUST00000157189 101 ntBASIC0.43□□□□□ -2.34
Ighv1-20A0A0A6YX66 Mir6389-201ENSMUST00000183661 102 ntBASIC0.43□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm38364-201ENSMUST00000191814 179 ntBASIC0.43□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm44462-201ENSMUST00000199696 129 ntBASIC0.43□□□□□ -2.34
Ighv1-20A0A0A6YX66 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.43□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm44211-201ENSMUST00000204867 145 ntBASIC0.43□□□□□ -2.34
Ighv1-20A0A0A6YX66 Snord100-201ENSMUST00000116836 74 ntBASIC0.42□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm14567-201ENSMUST00000117155 174 ntBASIC0.42□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm13345-201ENSMUST00000121928 228 ntBASIC0.42□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm28020-201ENSMUST00000157739 67 ntBASIC0.42□□□□□ -2.34
Ighv1-20A0A0A6YX66 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.42□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm25464-201ENSMUST00000175481 107 ntBASIC0.42□□□□□ -2.34
Ighv1-20A0A0A6YX66 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.42□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm45859-201ENSMUST00000212794 214 ntBASIC0.42□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm24258-201ENSMUST00000083739 133 ntBASIC0.42□□□□□ -2.34
Ighv1-20A0A0A6YX66 Mir541-201ENSMUST00000102097 90 ntBASIC0.41□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm23841-201ENSMUST00000116951 114 ntBASIC0.41□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm24385-201ENSMUST00000122694 350 ntBASIC0.41□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm23605-201ENSMUST00000157255 127 ntBASIC0.41□□□□□ -2.34
Ighv1-20A0A0A6YX66 Gm22302-201ENSMUST00000082657 106 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms