Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm22148-201ENSMUST00000104445 107 ntBASIC1.11□□□□□ -2.23
H2afb1S4R1E0 Snord72-201ENSMUST00000104549 81 ntBASIC1.11□□□□□ -2.23
H2afb1S4R1E0 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.11□□□□□ -2.23
H2afb1S4R1E0 Gm26363-201ENSMUST00000158866 83 ntBASIC1.11□□□□□ -2.23
H2afb1S4R1E0 Mir3061-201ENSMUST00000175129 91 ntBASIC1.11□□□□□ -2.23
H2afb1S4R1E0 Gm22129-201ENSMUST00000179034 107 ntBASIC1.11□□□□□ -2.23
H2afb1S4R1E0 Trav5-2-201ENSMUST00000199855 280 ntBASIC1.11□□□□□ -2.23
H2afb1S4R1E0 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.11□□□□□ -2.23
H2afb1S4R1E0 Snord1a-201ENSMUST00000083160 74 ntBASIC1.11□□□□□ -2.23
H2afb1S4R1E0 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.11□□□□□ -2.23
H2afb1S4R1E0 Gm24171-201ENSMUST00000104126 131 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Mir880-201ENSMUST00000104809 78 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Mir1904-201ENSMUST00000122702 80 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Gm24777-201ENSMUST00000157644 107 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Gm22557-201ENSMUST00000157804 102 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Gm23996-201ENSMUST00000158062 131 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Gm24902-201ENSMUST00000158126 123 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Gm44358-201ENSMUST00000196301 98 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Gm42988-201ENSMUST00000198116 225 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Gm19790-201ENSMUST00000214414 251 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Gm25650-201ENSMUST00000083784 162 ntBASIC1.1□□□□□ -2.23
H2afb1S4R1E0 Snord100-201ENSMUST00000116836 74 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm14567-201ENSMUST00000117155 174 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm13922-201ENSMUST00000119505 156 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm22337-201ENSMUST00000157721 132 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm22485-201ENSMUST00000157990 109 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm22387-201ENSMUST00000158191 131 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm22476-201ENSMUST00000158902 100 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm27672-201ENSMUST00000183751 204 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Mir21b-201ENSMUST00000184317 108 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm22980-201ENSMUST00000082608 70 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Snord96a-201ENSMUST00000082791 81 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm22973-201ENSMUST00000083298 191 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm24494-201ENSMUST00000083804 81 ntBASIC1.09□□□□□ -2.23
H2afb1S4R1E0 Gm23772-201ENSMUST00000104433 102 ntBASIC1.08□□□□□ -2.24
H2afb1S4R1E0 Gm22946-201ENSMUST00000158558 82 ntBASIC1.08□□□□□ -2.24
H2afb1S4R1E0 Gm25771-201ENSMUST00000158565 144 ntBASIC1.08□□□□□ -2.24
H2afb1S4R1E0 Mir7225-201ENSMUST00000184178 54 ntBASIC1.08□□□□□ -2.24
H2afb1S4R1E0 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
H2afb1S4R1E0 Gm25401-201ENSMUST00000082975 106 ntBASIC1.08□□□□□ -2.24
H2afb1S4R1E0 Gm26326-201ENSMUST00000083070 129 ntBASIC1.08□□□□□ -2.24
H2afb1S4R1E0 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm22850-201ENSMUST00000157714 82 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm22556-201ENSMUST00000157803 100 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm24750-201ENSMUST00000157843 104 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm22164-201ENSMUST00000158413 106 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm22929-201ENSMUST00000175517 107 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Mir8119-201ENSMUST00000183371 129 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm20118-201ENSMUST00000187207 162 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm38364-201ENSMUST00000191814 179 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm44408-201ENSMUST00000200205 66 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm44922-201ENSMUST00000206690 90 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm45544-201ENSMUST00000211130 88 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm8219-201ENSMUST00000218309 242 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm22738-201ENSMUST00000083440 147 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Mir186-201ENSMUST00000083497 71 ntBASIC1.07□□□□□ -2.24
H2afb1S4R1E0 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
H2afb1S4R1E0 Gm22790-201ENSMUST00000157229 129 ntBASIC1.06□□□□□ -2.24
H2afb1S4R1E0 Gm22606-201ENSMUST00000158290 103 ntBASIC1.06□□□□□ -2.24
H2afb1S4R1E0 Gm26403-201ENSMUST00000158500 105 ntBASIC1.06□□□□□ -2.24
H2afb1S4R1E0 Gm24638-201ENSMUST00000179807 132 ntBASIC1.06□□□□□ -2.24
H2afb1S4R1E0 Gm16399-201ENSMUST00000181423 219 ntBASIC1.06□□□□□ -2.24
H2afb1S4R1E0 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
H2afb1S4R1E0 Snord80-202ENSMUST00000199023 77 ntBASIC1.06□□□□□ -2.24
H2afb1S4R1E0 Gm5002-201ENSMUST00000207145 223 ntBASIC1.06□□□□□ -2.24
H2afb1S4R1E0 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
H2afb1S4R1E0 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Gm22785-201ENSMUST00000104087 132 ntBASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Gm14923-201ENSMUST00000118270 155 ntBASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Gm23670-201ENSMUST00000157469 119 ntBASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Gm42623-201ENSMUST00000197225 379 ntBASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Gm25588-201ENSMUST00000082501 140 ntBASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Mir211-201ENSMUST00000083651 106 ntBASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Mir451a-201ENSMUST00000093557 72 ntBASIC1.05□□□□□ -2.24
H2afb1S4R1E0 Mir547-201ENSMUST00000102051 78 ntBASIC1.04□□□□□ -2.24
H2afb1S4R1E0 Gm24131-201ENSMUST00000158539 107 ntBASIC1.04□□□□□ -2.24
H2afb1S4R1E0 Gm26360-201ENSMUST00000158872 103 ntBASIC1.04□□□□□ -2.24
H2afb1S4R1E0 Gm16546-201ENSMUST00000159442 355 ntBASIC1.04□□□□□ -2.24
H2afb1S4R1E0 Gm23567-201ENSMUST00000178005 107 ntBASIC1.04□□□□□ -2.24
H2afb1S4R1E0 Gm22348-201ENSMUST00000178674 79 ntBASIC1.04□□□□□ -2.24
H2afb1S4R1E0 Gm28256-201ENSMUST00000188953 139 ntBASIC1.04□□□□□ -2.24
H2afb1S4R1E0 Gm28559-201ENSMUST00000190532 139 ntBASIC1.04□□□□□ -2.24
H2afb1S4R1E0 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
H2afb1S4R1E0 Gm25832-201ENSMUST00000104140 130 ntBASIC1.03□□□□□ -2.24
H2afb1S4R1E0 Gm13345-201ENSMUST00000121928 228 ntBASIC1.03□□□□□ -2.24
H2afb1S4R1E0 Gm22612-201ENSMUST00000158293 101 ntBASIC1.03□□□□□ -2.24
H2afb1S4R1E0 Gm25949-201ENSMUST00000175333 114 ntBASIC1.03□□□□□ -2.24
H2afb1S4R1E0 Gm44396-201ENSMUST00000199843 114 ntBASIC1.03□□□□□ -2.24
H2afb1S4R1E0 Gm26224-201ENSMUST00000082506 80 ntBASIC1.03□□□□□ -2.24
H2afb1S4R1E0 Mir488-201ENSMUST00000093595 109 ntBASIC1.03□□□□□ -2.24
H2afb1S4R1E0 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
H2afb1S4R1E0 Gm44560-201ENSMUST00000207816 3115 ntBASIC1.02□□□□□ -2.25
H2afb1S4R1E0 Mir654-201ENSMUST00000104787 84 ntBASIC1.02□□□□□ -2.25
H2afb1S4R1E0 Gm24588-201ENSMUST00000116696 83 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 1211.4 ms