Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Prpf40aQ9R1C7 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.87□□□□□ -1.95
Prpf40aQ9R1C7 Gm22545-201ENSMUST00000104350 132 ntBASIC2.86□□□□□ -1.95
Prpf40aQ9R1C7 Gm23083-201ENSMUST00000157851 116 ntBASIC2.86□□□□□ -1.95
Prpf40aQ9R1C7 Mir3471-1-201ENSMUST00000175139 131 ntBASIC2.86□□□□□ -1.95
Prpf40aQ9R1C7 Gm22638-201ENSMUST00000179674 107 ntBASIC2.86□□□□□ -1.95
Prpf40aQ9R1C7 Gm44555-201ENSMUST00000209008 148 ntBASIC2.86□□□□□ -1.95
Prpf40aQ9R1C7 Gm45522-201ENSMUST00000210784 166 ntBASIC2.86□□□□□ -1.95
Prpf40aQ9R1C7 Mir411-201ENSMUST00000083543 82 ntBASIC2.86□□□□□ -1.95
Prpf40aQ9R1C7 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.86□□□□□ -1.95
Prpf40aQ9R1C7 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Gm25022-201ENSMUST00000102205 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Gm24068-201ENSMUST00000104513 132 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Mir467a-6-201ENSMUST00000177790 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Mir467a-3-201ENSMUST00000178082 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Mir467a-7-201ENSMUST00000178635 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Mir467a-10-201ENSMUST00000179320 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Mir467a-5-201ENSMUST00000179352 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Mir467a-2-201ENSMUST00000179447 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Mir467a-9-201ENSMUST00000179752 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Mir467a-4-201ENSMUST00000179923 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Mir467a-8-201ENSMUST00000180070 83 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Prpf40aQ9R1C7 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Prpf40aQ9R1C7 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Prpf40aQ9R1C7 Gm26214-201ENSMUST00000158581 107 ntBASIC2.84□□□□□ -1.95
Prpf40aQ9R1C7 Mir3086-201ENSMUST00000175072 87 ntBASIC2.84□□□□□ -1.95
Prpf40aQ9R1C7 Mir7013-201ENSMUST00000183540 72 ntBASIC2.84□□□□□ -1.95
Prpf40aQ9R1C7 Gm23507-201ENSMUST00000083078 107 ntBASIC2.84□□□□□ -1.95
Prpf40aQ9R1C7 Gm24436-201ENSMUST00000157889 302 ntBASIC2.83□□□□□ -1.96
Prpf40aQ9R1C7 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.83□□□□□ -1.96
Prpf40aQ9R1C7 Gm44932-201ENSMUST00000206799 121 ntBASIC2.83□□□□□ -1.96
Prpf40aQ9R1C7 Snora3-201ENSMUST00000083082 132 ntBASIC2.83□□□□□ -1.96
Prpf40aQ9R1C7 Gm22154-201ENSMUST00000083844 131 ntBASIC2.83□□□□□ -1.96
Prpf40aQ9R1C7 Gm11856-201ENSMUST00000118712 276 ntBASIC2.82□□□□□ -1.96
Prpf40aQ9R1C7 Gm25153-201ENSMUST00000157118 156 ntBASIC2.82□□□□□ -1.96
Prpf40aQ9R1C7 Gm26411-201ENSMUST00000157668 107 ntBASIC2.82□□□□□ -1.96
Prpf40aQ9R1C7 Gm24771-201ENSMUST00000158508 137 ntBASIC2.82□□□□□ -1.96
Prpf40aQ9R1C7 Gm27532-201ENSMUST00000183726 113 ntBASIC2.82□□□□□ -1.96
Prpf40aQ9R1C7 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Prpf40aQ9R1C7 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Gm22486-201ENSMUST00000116815 137 ntBASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Gm26090-201ENSMUST00000157897 128 ntBASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Gm22251-201ENSMUST00000083216 107 ntBASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Mir300-201ENSMUST00000083485 79 ntBASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.81□□□□□ -1.96
Prpf40aQ9R1C7 Gm25090-201ENSMUST00000104000 132 ntBASIC2.8□□□□□ -1.96
Prpf40aQ9R1C7 Mir1195-201ENSMUST00000116818 98 ntBASIC2.8□□□□□ -1.96
Prpf40aQ9R1C7 Gm24691-201ENSMUST00000157762 140 ntBASIC2.8□□□□□ -1.96
Prpf40aQ9R1C7 Gm20718-201ENSMUST00000176058 259 ntBASIC2.8□□□□□ -1.96
Prpf40aQ9R1C7 Gm45452-201ENSMUST00000210905 177 ntBASIC2.8□□□□□ -1.96
Prpf40aQ9R1C7 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.8□□□□□ -1.96
Prpf40aQ9R1C7 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Prpf40aQ9R1C7 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.8□□□□□ -1.96
Prpf40aQ9R1C7 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.8□□□□□ -1.96
Prpf40aQ9R1C7 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.79□□□□□ -1.96
Prpf40aQ9R1C7 Gm23600-201ENSMUST00000157260 71 ntBASIC2.79□□□□□ -1.96
Prpf40aQ9R1C7 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Prpf40aQ9R1C7 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.78□□□□□ -1.96
Prpf40aQ9R1C7 Mir682-201ENSMUST00000102281 96 ntBASIC2.78□□□□□ -1.96
Prpf40aQ9R1C7 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Prpf40aQ9R1C7 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.78□□□□□ -1.96
Prpf40aQ9R1C7 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Prpf40aQ9R1C7 Gm23996-201ENSMUST00000158062 131 ntBASIC2.77□□□□□ -1.97
Prpf40aQ9R1C7 Gm27979-201ENSMUST00000185126 56 ntBASIC2.77□□□□□ -1.97
Prpf40aQ9R1C7 Snord43-201ENSMUST00000199549 108 ntBASIC2.77□□□□□ -1.97
Prpf40aQ9R1C7 Gm45471-201ENSMUST00000211270 281 ntBASIC2.77□□□□□ -1.97
Prpf40aQ9R1C7 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.77□□□□□ -1.97
Prpf40aQ9R1C7 Snora41-201ENSMUST00000082668 132 ntBASIC2.77□□□□□ -1.97
Prpf40aQ9R1C7 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
Prpf40aQ9R1C7 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Prpf40aQ9R1C7 Mir344c-201ENSMUST00000103919 92 ntBASIC2.76□□□□□ -1.97
Prpf40aQ9R1C7 Mir466k-201ENSMUST00000116774 122 ntBASIC2.76□□□□□ -1.97
Prpf40aQ9R1C7 Gm22622-201ENSMUST00000082870 129 ntBASIC2.76□□□□□ -1.97
Prpf40aQ9R1C7 Snord104-201ENSMUST00000083192 70 ntBASIC2.76□□□□□ -1.97
Prpf40aQ9R1C7 Gm23038-201ENSMUST00000083873 104 ntBASIC2.76□□□□□ -1.97
Prpf40aQ9R1C7 Mir451a-201ENSMUST00000093557 72 ntBASIC2.76□□□□□ -1.97
Prpf40aQ9R1C7 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Prpf40aQ9R1C7 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Prpf40aQ9R1C7 Snora36b-201ENSMUST00000104383 132 ntBASIC2.75□□□□□ -1.97
Prpf40aQ9R1C7 Gm22772-201ENSMUST00000104451 121 ntBASIC2.75□□□□□ -1.97
Prpf40aQ9R1C7 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC2.75□□□□□ -1.97
Prpf40aQ9R1C7 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.75□□□□□ -1.97
Prpf40aQ9R1C7 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Prpf40aQ9R1C7 Gm24475-201ENSMUST00000157435 143 ntBASIC2.74□□□□□ -1.97
Prpf40aQ9R1C7 Gm22815-201ENSMUST00000157451 62 ntBASIC2.74□□□□□ -1.97
Prpf40aQ9R1C7 Gm25750-201ENSMUST00000175483 112 ntBASIC2.74□□□□□ -1.97
Prpf40aQ9R1C7 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Prpf40aQ9R1C7 Snord78-201ENSMUST00000104032 66 ntBASIC2.73□□□□□ -1.97
Prpf40aQ9R1C7 Gm22674-201ENSMUST00000104413 131 ntBASIC2.73□□□□□ -1.97
Prpf40aQ9R1C7 Gm26247-201ENSMUST00000116702 91 ntBASIC2.73□□□□□ -1.97
Prpf40aQ9R1C7 Gm14674-201ENSMUST00000117816 342 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 181.9 ms