Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm26213-201ENSMUST00000158582 110 ntBASIC2.89□□□□□ -1.95
Nubp1Q9R060 Trbv25-201ENSMUST00000194700 273 ntBASIC2.89□□□□□ -1.95
Nubp1Q9R060 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.89□□□□□ -1.95
Nubp1Q9R060 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.89□□□□□ -1.95
Nubp1Q9R060 Gm25788-201ENSMUST00000082721 131 ntBASIC2.89□□□□□ -1.95
Nubp1Q9R060 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Nubp1Q9R060 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.89□□□□□ -1.95
Nubp1Q9R060 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC2.89□□□□□ -1.95
Nubp1Q9R060 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Nubp1Q9R060 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Nubp1Q9R060 Gm37176-201ENSMUST00000193300 4051 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Mir693-201ENSMUST00000102187 89 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Nubp1Q9R060 Gm22674-201ENSMUST00000104413 131 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Gm22034-201ENSMUST00000157283 134 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Gm25370-201ENSMUST00000158159 94 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Gm22503-201ENSMUST00000158983 115 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Mir3086-201ENSMUST00000175072 87 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Gm25750-201ENSMUST00000175483 112 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Gm42935-201ENSMUST00000202004 151 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 AC159093.2-201ENSMUST00000227881 297 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Gm25337-201ENSMUST00000083723 104 ntBASIC2.88□□□□□ -1.95
Nubp1Q9R060 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nubp1Q9R060 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Nubp1Q9R060 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Nubp1Q9R060 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.87□□□□□ -1.95
Nubp1Q9R060 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm25485-201ENSMUST00000104120 132 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm9009-201ENSMUST00000117321 326 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm23838-201ENSMUST00000158067 162 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm23257-201ENSMUST00000158322 132 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm25011-201ENSMUST00000158398 126 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm24880-201ENSMUST00000158776 85 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm22910-201ENSMUST00000178568 132 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 Snord80-201ENSMUST00000083801 81 ntBASIC2.87□□□□□ -1.95
Nubp1Q9R060 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nubp1Q9R060 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Nubp1Q9R060 Gm26145-201ENSMUST00000104476 127 ntBASIC2.86□□□□□ -1.95
Nubp1Q9R060 Gm25329-201ENSMUST00000158041 126 ntBASIC2.86□□□□□ -1.95
Nubp1Q9R060 Gm23375-201ENSMUST00000175407 83 ntBASIC2.86□□□□□ -1.95
Nubp1Q9R060 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.86□□□□□ -1.95
Nubp1Q9R060 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.86□□□□□ -1.95
Nubp1Q9R060 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Nubp1Q9R060 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Nubp1Q9R060 Gm22425-201ENSMUST00000158532 138 ntBASIC2.85□□□□□ -1.95
Nubp1Q9R060 Gm3724-201ENSMUST00000197957 349 ntBASIC2.85□□□□□ -1.95
Nubp1Q9R060 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
Nubp1Q9R060 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC2.85□□□□□ -1.95
Nubp1Q9R060 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.84□□□□□ -1.95
Nubp1Q9R060 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Nubp1Q9R060 Gm22782-201ENSMUST00000104082 132 ntBASIC2.84□□□□□ -1.95
Nubp1Q9R060 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.84□□□□□ -1.95
Nubp1Q9R060 Gm24801-201ENSMUST00000178503 105 ntBASIC2.84□□□□□ -1.95
Nubp1Q9R060 Mir6379-201ENSMUST00000183392 115 ntBASIC2.84□□□□□ -1.95
Nubp1Q9R060 Gm27783-201ENSMUST00000183534 105 ntBASIC2.84□□□□□ -1.95
Nubp1Q9R060 Mir8090-201ENSMUST00000185078 136 ntBASIC2.84□□□□□ -1.95
Nubp1Q9R060 Gm24523-201ENSMUST00000083965 132 ntBASIC2.84□□□□□ -1.95
Nubp1Q9R060 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
Nubp1Q9R060 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Nubp1Q9R060 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Nubp1Q9R060 Gm24691-201ENSMUST00000157762 140 ntBASIC2.83□□□□□ -1.96
Nubp1Q9R060 CT030161.1-201ENSMUST00000218411 124 ntBASIC2.83□□□□□ -1.96
Nubp1Q9R060 Gm24527-201ENSMUST00000082920 107 ntBASIC2.83□□□□□ -1.96
Nubp1Q9R060 Gm22884-201ENSMUST00000083127 140 ntBASIC2.83□□□□□ -1.96
Nubp1Q9R060 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.83□□□□□ -1.96
Nubp1Q9R060 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Nubp1Q9R060 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Nubp1Q9R060 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Nubp1Q9R060 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Nubp1Q9R060 Gm14389-201ENSMUST00000140453 241 ntBASIC2.82□□□□□ -1.96
Nubp1Q9R060 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.82□□□□□ -1.96
Nubp1Q9R060 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.82□□□□□ -1.96
Nubp1Q9R060 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Nubp1Q9R060 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.82□□□□□ -1.96
Nubp1Q9R060 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Nubp1Q9R060 Gm22672-201ENSMUST00000104414 134 ntBASIC2.81□□□□□ -1.96
Nubp1Q9R060 Gm26425-201ENSMUST00000122529 82 ntBASIC2.81□□□□□ -1.96
Nubp1Q9R060 Gm26297-201ENSMUST00000179464 132 ntBASIC2.81□□□□□ -1.96
Nubp1Q9R060 Gm27505-201ENSMUST00000185071 110 ntBASIC2.81□□□□□ -1.96
Nubp1Q9R060 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
Nubp1Q9R060 mt-Tc-201ENSMUST00000082400 66 ntBASIC2.81□□□□□ -1.96
Nubp1Q9R060 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Nubp1Q9R060 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Nubp1Q9R060 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Nubp1Q9R060 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Nubp1Q9R060 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Nubp1Q9R060 Gm24890-201ENSMUST00000104389 102 ntBASIC2.8□□□□□ -1.96
Nubp1Q9R060 Mir1198-201ENSMUST00000116995 121 ntBASIC2.8□□□□□ -1.96
Nubp1Q9R060 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.8□□□□□ -1.96
Nubp1Q9R060 Gm20391-201ENSMUST00000174722 106 ntBASIC2.8□□□□□ -1.96
Nubp1Q9R060 Mir6905-201ENSMUST00000184228 70 ntBASIC2.8□□□□□ -1.96
Nubp1Q9R060 Gm27979-201ENSMUST00000185126 56 ntBASIC2.8□□□□□ -1.96
Nubp1Q9R060 Mir300-201ENSMUST00000083485 79 ntBASIC2.8□□□□□ -1.96
Nubp1Q9R060 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.79□□□□□ -1.96
Nubp1Q9R060 Gm22187-201ENSMUST00000157819 129 ntBASIC2.79□□□□□ -1.96
Nubp1Q9R060 Gm22089-201ENSMUST00000158336 102 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms