Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm22233-201ENSMUST00000157464 114 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm25868-201ENSMUST00000158253 114 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm38183-201ENSMUST00000193189 205 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm36189-201ENSMUST00000204113 523 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm22358-201ENSMUST00000082877 122 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm22421-201ENSMUST00000083058 107 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm25188-201ENSMUST00000083913 122 ntBASIC0.81□□□□□ -2.28
Scn4aQ9ER60 Gm28669-201ENSMUST00000188400 100 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm44976-201ENSMUST00000205543 261 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm7240-201ENSMUST00000220769 664 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm24494-201ENSMUST00000083804 81 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm23749-201ENSMUST00000104223 131 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm25110-201ENSMUST00000116684 121 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm25775-201ENSMUST00000116716 121 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm24795-201ENSMUST00000116737 121 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm25171-201ENSMUST00000116926 121 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm11904-201ENSMUST00000120562 248 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm24392-201ENSMUST00000158136 103 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm26287-201ENSMUST00000158887 81 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm24667-201ENSMUST00000158938 103 ntBASIC0.8□□□□□ -2.28
Scn4aQ9ER60 Gm25538-201ENSMUST00000101943 107 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm24559-201ENSMUST00000157519 121 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm25664-201ENSMUST00000157697 107 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm29490-201ENSMUST00000190923 342 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Mir3970-201ENSMUST00000199287 90 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm45673-201ENSMUST00000210293 358 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Snora19-201ENSMUST00000082962 132 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm23658-201ENSMUST00000083233 132 ntBASIC0.79□□□□□ -2.28
Scn4aQ9ER60 Gm24423-201ENSMUST00000101982 106 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm22545-201ENSMUST00000104350 132 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm11792-201ENSMUST00000120640 168 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm25318-201ENSMUST00000122554 314 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm25323-201ENSMUST00000122555 103 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm23214-201ENSMUST00000122716 157 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm25267-201ENSMUST00000158522 63 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Mir6951-201ENSMUST00000183910 75 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm44373-201ENSMUST00000196112 169 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm22809-201ENSMUST00000082743 156 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm25851-201ENSMUST00000082794 107 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm26497-201ENSMUST00000083146 107 ntBASIC0.78□□□□□ -2.28
Scn4aQ9ER60 Gm42855-201ENSMUST00000197388 253 ntBASIC0.78□□□□□ -2.29
Scn4aQ9ER60 Gm26123-201ENSMUST00000083363 135 ntBASIC0.78□□□□□ -2.29
Scn4aQ9ER60 Gm24764-201ENSMUST00000083686 199 ntBASIC0.78□□□□□ -2.29
Scn4aQ9ER60 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm14671-201ENSMUST00000121790 262 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm22450-201ENSMUST00000179641 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm25473-201ENSMUST00000180191 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm38274-201ENSMUST00000195689 148 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm24856-201ENSMUST00000082809 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm24204-201ENSMUST00000082950 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm26071-201ENSMUST00000083261 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Mir34a-201ENSMUST00000083559 102 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Gm24521-201ENSMUST00000083958 107 ntBASIC0.77□□□□□ -2.29
Scn4aQ9ER60 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Gm24171-201ENSMUST00000104126 131 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Gm22586-201ENSMUST00000157507 122 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Gm22387-201ENSMUST00000158191 131 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Mir6364-201ENSMUST00000183396 86 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Gm25512-201ENSMUST00000083863 107 ntBASIC0.76□□□□□ -2.29
Scn4aQ9ER60 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm23113-201ENSMUST00000158477 99 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm43505-201ENSMUST00000200579 139 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 mt-Tr-201ENSMUST00000082412 68 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm25855-201ENSMUST00000082787 72 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm24042-201ENSMUST00000083114 103 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm23672-201ENSMUST00000157471 107 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.75□□□□□ -2.29
Scn4aQ9ER60 Gm23130-201ENSMUST00000104252 74 ntBASIC0.74□□□□□ -2.29
Scn4aQ9ER60 Gm23584-201ENSMUST00000157655 129 ntBASIC0.74□□□□□ -2.29
Scn4aQ9ER60 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.74□□□□□ -2.29
Scn4aQ9ER60 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.74□□□□□ -2.29
Scn4aQ9ER60 Gm24000-201ENSMUST00000158063 89 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm16539-201ENSMUST00000160086 327 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Mir3089-201ENSMUST00000175350 84 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Mir3079-201ENSMUST00000175428 90 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm27672-201ENSMUST00000183751 204 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm27365-201ENSMUST00000184041 177 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm18213-201ENSMUST00000207850 178 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm24453-201ENSMUST00000083346 76 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Mir875-201ENSMUST00000104698 78 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm13246-201ENSMUST00000120994 315 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm22888-201ENSMUST00000158640 77 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm28016-201ENSMUST00000184594 196 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.73□□□□□ -2.29
Scn4aQ9ER60 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm37715-201ENSMUST00000193206 235 ntBASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm23299-201ENSMUST00000082708 79 ntBASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm22686-201ENSMUST00000082847 100 ntBASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Scn4aQ9ER60 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 156.3 ms