Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Gm22196-201ENSMUST00000116865 109 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Gm23983-201ENSMUST00000157142 114 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Gm22554-201ENSMUST00000157798 147 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Gm9156-201ENSMUST00000189660 463 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Gm42807-201ENSMUST00000200141 329 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Gm45544-201ENSMUST00000211130 88 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Rnft1Q9DCN7 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.11□□□□□ -2.07
Rnft1Q9DCN7 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.11□□□□□ -2.07
Rnft1Q9DCN7 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Rnft1Q9DCN7 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Rnft1Q9DCN7 Gm26415-201ENSMUST00000157673 292 ntBASIC2.11□□□□□ -2.07
Rnft1Q9DCN7 Gm44308-201ENSMUST00000197080 99 ntBASIC2.11□□□□□ -2.07
Rnft1Q9DCN7 Mir3961-201ENSMUST00000198795 59 ntBASIC2.11□□□□□ -2.07
Rnft1Q9DCN7 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.11□□□□□ -2.07
Rnft1Q9DCN7 Gm45429-201ENSMUST00000209527 172 ntBASIC2.11□□□□□ -2.07
Rnft1Q9DCN7 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm26051-201ENSMUST00000104642 93 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm14588-201ENSMUST00000119895 172 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm23898-201ENSMUST00000158111 103 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm22163-201ENSMUST00000158408 135 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm25707-201ENSMUST00000175120 96 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm25996-201ENSMUST00000175393 117 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Mir5118-201ENSMUST00000175551 67 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm23963-201ENSMUST00000179603 77 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Mir6377-201ENSMUST00000183760 114 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm27446-201ENSMUST00000183963 89 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm24038-201ENSMUST00000082872 159 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 BC022960-201ENSMUST00000119987 1815 ntBASIC2.1□□□□□ -2.07
Rnft1Q9DCN7 Gm22796-201ENSMUST00000157234 106 ntBASIC2.09□□□□□ -2.07
Rnft1Q9DCN7 Gm25558-201ENSMUST00000158083 106 ntBASIC2.09□□□□□ -2.07
Rnft1Q9DCN7 Gm22666-201ENSMUST00000158717 164 ntBASIC2.09□□□□□ -2.07
Rnft1Q9DCN7 Gm24572-201ENSMUST00000175505 88 ntBASIC2.09□□□□□ -2.07
Rnft1Q9DCN7 Gm8034-201ENSMUST00000178853 132 ntBASIC2.09□□□□□ -2.07
Rnft1Q9DCN7 Gm27959-201ENSMUST00000185172 111 ntBASIC2.09□□□□□ -2.07
Rnft1Q9DCN7 Gm45386-201ENSMUST00000210194 218 ntBASIC2.09□□□□□ -2.07
Rnft1Q9DCN7 Mir301-201ENSMUST00000083655 86 ntBASIC2.09□□□□□ -2.07
Rnft1Q9DCN7 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
Rnft1Q9DCN7 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Rnft1Q9DCN7 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.08
Rnft1Q9DCN7 Gm14671-201ENSMUST00000121790 262 ntBASIC2.08□□□□□ -2.08
Rnft1Q9DCN7 Gm23817-201ENSMUST00000158449 104 ntBASIC2.08□□□□□ -2.08
Rnft1Q9DCN7 Gm22500-201ENSMUST00000158982 99 ntBASIC2.08□□□□□ -2.08
Rnft1Q9DCN7 Gm27878-201ENSMUST00000184000 106 ntBASIC2.08□□□□□ -2.08
Rnft1Q9DCN7 Mir7009-201ENSMUST00000184519 64 ntBASIC2.08□□□□□ -2.08
Rnft1Q9DCN7 mt-Tv-201ENSMUST00000082389 69 ntBASIC2.08□□□□□ -2.08
Rnft1Q9DCN7 Gm25851-201ENSMUST00000082794 107 ntBASIC2.08□□□□□ -2.08
Rnft1Q9DCN7 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm26076-201ENSMUST00000104065 105 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm24122-201ENSMUST00000104107 132 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm26104-201ENSMUST00000157250 108 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm24913-201ENSMUST00000157286 107 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm22228-201ENSMUST00000157364 101 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm22338-201ENSMUST00000157715 129 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm25460-201ENSMUST00000157954 127 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Mir3075-201ENSMUST00000175340 85 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Mir3076-201ENSMUST00000175415 60 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm28900-201ENSMUST00000185232 156 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm28270-201ENSMUST00000188550 109 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm28328-201ENSMUST00000188869 109 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Mir6925-201ENSMUST00000197857 70 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm26326-201ENSMUST00000083070 129 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm24044-201ENSMUST00000083107 156 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Gm24698-201ENSMUST00000083883 130 ntBASIC2.07□□□□□ -2.08
Rnft1Q9DCN7 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Gm24468-201ENSMUST00000104489 104 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Gm26342-201ENSMUST00000104557 129 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Gm22031-201ENSMUST00000116945 126 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Gm16265-201ENSMUST00000134558 108 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Gm24238-201ENSMUST00000157792 98 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Gm25371-201ENSMUST00000158162 101 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Mir3083-201ENSMUST00000175377 64 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Mir378a-201ENSMUST00000198300 66 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Gm45268-201ENSMUST00000210046 370 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Mir300-201ENSMUST00000083485 79 ntBASIC2.06□□□□□ -2.08
Rnft1Q9DCN7 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.05□□□□□ -2.08
Rnft1Q9DCN7 Gm26154-201ENSMUST00000102339 96 ntBASIC2.05□□□□□ -2.08
Rnft1Q9DCN7 Gm12309-201ENSMUST00000119889 182 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms