Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm44057-201ENSMUST00000204547 96 ntBASIC0.44□□□□□ -2.34
Cdc40Q9DC48 Gm44563-201ENSMUST00000207958 178 ntBASIC0.44□□□□□ -2.34
Cdc40Q9DC48 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.44□□□□□ -2.34
Cdc40Q9DC48 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Cdc40Q9DC48 Gm25875-201ENSMUST00000104323 107 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm26303-201ENSMUST00000116845 119 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm13801-201ENSMUST00000120750 160 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm14671-201ENSMUST00000121790 262 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm26090-201ENSMUST00000157897 128 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm44977-201ENSMUST00000205283 420 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm45544-201ENSMUST00000211130 88 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm7240-201ENSMUST00000220769 664 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm23406-201ENSMUST00000082537 122 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm25138-201ENSMUST00000083248 136 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm24616-201ENSMUST00000083274 139 ntBASIC0.43□□□□□ -2.34
Cdc40Q9DC48 Gm24555-201ENSMUST00000104548 124 ntBASIC0.42□□□□□ -2.34
Cdc40Q9DC48 Gm22553-201ENSMUST00000157797 295 ntBASIC0.42□□□□□ -2.34
Cdc40Q9DC48 Gm28579-201ENSMUST00000186143 369 ntBASIC0.42□□□□□ -2.34
Cdc40Q9DC48 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.42□□□□□ -2.34
Cdc40Q9DC48 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.42□□□□□ -2.34
Cdc40Q9DC48 Gm24765-201ENSMUST00000083691 103 ntBASIC0.42□□□□□ -2.34
Cdc40Q9DC48 Gm25512-201ENSMUST00000083863 107 ntBASIC0.42□□□□□ -2.34
Cdc40Q9DC48 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Cdc40Q9DC48 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.41□□□□□ -2.34
Cdc40Q9DC48 Gm22118-201ENSMUST00000175593 171 ntBASIC0.41□□□□□ -2.34
Cdc40Q9DC48 Gm28008-201ENSMUST00000184021 186 ntBASIC0.41□□□□□ -2.34
Cdc40Q9DC48 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
Cdc40Q9DC48 Gm44464-201ENSMUST00000198010 138 ntBASIC0.41□□□□□ -2.34
Cdc40Q9DC48 Gm25538-201ENSMUST00000101943 107 ntBASIC0.4□□□□□ -2.35
Cdc40Q9DC48 Gm22784-201ENSMUST00000104088 132 ntBASIC0.4□□□□□ -2.35
Cdc40Q9DC48 Mir875-201ENSMUST00000104698 78 ntBASIC0.4□□□□□ -2.35
Cdc40Q9DC48 Gm25424-201ENSMUST00000157612 58 ntBASIC0.4□□□□□ -2.35
Cdc40Q9DC48 Gm25161-201ENSMUST00000158913 132 ntBASIC0.4□□□□□ -2.35
Cdc40Q9DC48 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC0.4□□□□□ -2.35
Cdc40Q9DC48 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Cdc40Q9DC48 Gm36189-201ENSMUST00000204113 523 ntBASIC0.4□□□□□ -2.35
Cdc40Q9DC48 Gm12837-201ENSMUST00000120131 373 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm25318-201ENSMUST00000122554 314 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm23672-201ENSMUST00000157471 107 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm24392-201ENSMUST00000158136 103 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm24667-201ENSMUST00000158938 103 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm22801-201ENSMUST00000175624 84 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm25024-201ENSMUST00000179667 104 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Mir6377-201ENSMUST00000183760 114 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm27521-201ENSMUST00000184022 64 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm28925-201ENSMUST00000188586 168 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm44055-201ENSMUST00000204376 247 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 AC141438.3-201ENSMUST00000215632 202 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm26497-201ENSMUST00000083146 107 ntBASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
Cdc40Q9DC48 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
Cdc40Q9DC48 Gm26293-201ENSMUST00000104170 84 ntBASIC0.38□□□□□ -2.35
Cdc40Q9DC48 Gm14884-201ENSMUST00000120456 196 ntBASIC0.38□□□□□ -2.35
Cdc40Q9DC48 Gm22706-201ENSMUST00000157907 112 ntBASIC0.38□□□□□ -2.35
Cdc40Q9DC48 Gm26287-201ENSMUST00000158887 81 ntBASIC0.38□□□□□ -2.35
Cdc40Q9DC48 Gm16307-201ENSMUST00000161269 210 ntBASIC0.38□□□□□ -2.35
Cdc40Q9DC48 Gm25247-201ENSMUST00000175475 90 ntBASIC0.38□□□□□ -2.35
Cdc40Q9DC48 Gm44211-201ENSMUST00000204867 145 ntBASIC0.38□□□□□ -2.35
Cdc40Q9DC48 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.38□□□□□ -2.35
Cdc40Q9DC48 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
Cdc40Q9DC48 Mir709-201ENSMUST00000102190 88 ntBASIC0.37□□□□□ -2.35
Cdc40Q9DC48 Gm22479-201ENSMUST00000122566 81 ntBASIC0.37□□□□□ -2.35
Cdc40Q9DC48 Gm25828-201ENSMUST00000157087 95 ntBASIC0.37□□□□□ -2.35
Cdc40Q9DC48 Gm22836-201ENSMUST00000158441 61 ntBASIC0.37□□□□□ -2.35
Cdc40Q9DC48 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.37□□□□□ -2.35
Cdc40Q9DC48 Gm45673-201ENSMUST00000210293 358 ntBASIC0.37□□□□□ -2.35
Cdc40Q9DC48 Gm6272-201ENSMUST00000121256 171 ntBASIC0.36□□□□□ -2.35
Cdc40Q9DC48 Gm26274-201ENSMUST00000157103 321 ntBASIC0.36□□□□□ -2.35
Cdc40Q9DC48 Gm22340-201ENSMUST00000157717 114 ntBASIC0.36□□□□□ -2.35
Cdc40Q9DC48 Mir1933-201ENSMUST00000158930 88 ntBASIC0.36□□□□□ -2.35
Cdc40Q9DC48 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.36□□□□□ -2.35
Cdc40Q9DC48 Gm25142-201ENSMUST00000082698 107 ntBASIC0.36□□□□□ -2.35
Cdc40Q9DC48 Gm23969-201ENSMUST00000083324 74 ntBASIC0.36□□□□□ -2.35
Cdc40Q9DC48 AC160984.1-201ENSMUST00000225855 3154 ntBASIC0.36□□□□□ -2.35
Cdc40Q9DC48 Gm22759-201ENSMUST00000102276 96 ntBASIC0.35□□□□□ -2.35
Cdc40Q9DC48 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Cdc40Q9DC48 Gm24559-201ENSMUST00000157519 121 ntBASIC0.35□□□□□ -2.35
Cdc40Q9DC48 Gm27845-201ENSMUST00000184479 114 ntBASIC0.35□□□□□ -2.35
Cdc40Q9DC48 Gm45313-201ENSMUST00000210584 178 ntBASIC0.35□□□□□ -2.35
Cdc40Q9DC48 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.35□□□□□ -2.35
Cdc40Q9DC48 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Cdc40Q9DC48 Gm25110-201ENSMUST00000116684 121 ntBASIC0.34□□□□□ -2.36
Cdc40Q9DC48 Gm25775-201ENSMUST00000116716 121 ntBASIC0.34□□□□□ -2.36
Cdc40Q9DC48 Gm24795-201ENSMUST00000116737 121 ntBASIC0.34□□□□□ -2.36
Cdc40Q9DC48 Gm25171-201ENSMUST00000116926 121 ntBASIC0.34□□□□□ -2.36
Cdc40Q9DC48 Gm25393-201ENSMUST00000157336 285 ntBASIC0.34□□□□□ -2.36
Cdc40Q9DC48 Gm25882-201ENSMUST00000157784 85 ntBASIC0.34□□□□□ -2.36
Cdc40Q9DC48 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.34□□□□□ -2.36
Cdc40Q9DC48 Mir6389-201ENSMUST00000183661 102 ntBASIC0.34□□□□□ -2.36
Cdc40Q9DC48 Gm27980-201ENSMUST00000184094 169 ntBASIC0.34□□□□□ -2.36
Cdc40Q9DC48 Gm26076-201ENSMUST00000104065 105 ntBASIC0.33□□□□□ -2.36
Cdc40Q9DC48 Mir466f-2-201ENSMUST00000104805 94 ntBASIC0.33□□□□□ -2.36
Cdc40Q9DC48 Gm14946-201ENSMUST00000119859 296 ntBASIC0.33□□□□□ -2.36
Cdc40Q9DC48 Gm13246-201ENSMUST00000120994 315 ntBASIC0.33□□□□□ -2.36
Cdc40Q9DC48 Gm44828-201ENSMUST00000203745 106 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 254.7 ms