Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Gm24902-201ENSMUST00000158126 123 ntBASIC1.55□□□□□ -2.16
Rnf6Q9DBU5 Mir7241-201ENSMUST00000184532 64 ntBASIC1.55□□□□□ -2.16
Rnf6Q9DBU5 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.55□□□□□ -2.16
Rnf6Q9DBU5 Gm24461-201ENSMUST00000082735 103 ntBASIC1.55□□□□□ -2.16
Rnf6Q9DBU5 Gm10172-201ENSMUST00000085929 558 ntBASIC1.55□□□□□ -2.16
Rnf6Q9DBU5 Mir223-201ENSMUST00000102112 110 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Gm25068-201ENSMUST00000103895 110 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Gm14882-201ENSMUST00000117216 218 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Gm25060-201ENSMUST00000157374 130 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Gm26360-201ENSMUST00000158872 103 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Gm25958-201ENSMUST00000175114 71 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Gm25730-201ENSMUST00000178753 165 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Gm27265-201ENSMUST00000183559 77 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Mir7683-201ENSMUST00000183842 61 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Gm44325-201ENSMUST00000196757 77 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Gm10351-201ENSMUST00000087694 125 ntBASIC1.54□□□□□ -2.16
Rnf6Q9DBU5 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.53□□□□□ -2.16
Rnf6Q9DBU5 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.53□□□□□ -2.16
Rnf6Q9DBU5 Gm22082-201ENSMUST00000157587 161 ntBASIC1.53□□□□□ -2.16
Rnf6Q9DBU5 Gm23113-201ENSMUST00000158477 99 ntBASIC1.53□□□□□ -2.16
Rnf6Q9DBU5 Gm28794-201ENSMUST00000185276 136 ntBASIC1.53□□□□□ -2.16
Rnf6Q9DBU5 Gm38364-201ENSMUST00000191814 179 ntBASIC1.53□□□□□ -2.16
Rnf6Q9DBU5 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Rnf6Q9DBU5 Snord61-201ENSMUST00000083176 71 ntBASIC1.53□□□□□ -2.16
Rnf6Q9DBU5 Gm23100-201ENSMUST00000083455 141 ntBASIC1.53□□□□□ -2.16
Rnf6Q9DBU5 AC154515.1-201ENSMUST00000226085 2841 ntBASIC1.53□□□□□ -2.17
Rnf6Q9DBU5 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm25323-201ENSMUST00000122555 103 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm24895-201ENSMUST00000122742 74 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm24262-201ENSMUST00000157431 144 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm24717-201ENSMUST00000157522 124 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm23898-201ENSMUST00000158111 103 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm22384-201ENSMUST00000158187 104 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Mir1931-201ENSMUST00000158589 119 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm45492-201ENSMUST00000211611 288 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm16976-205ENSMUST00000227324 226 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm23445-201ENSMUST00000082800 107 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Gm24449-201ENSMUST00000083985 106 ntBASIC1.52□□□□□ -2.17
Rnf6Q9DBU5 Snord90-201ENSMUST00000104568 111 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 Gm11334-201ENSMUST00000121969 156 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 Gm24141-201ENSMUST00000122776 115 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 Gm23854-201ENSMUST00000158378 108 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 Gm27326-201ENSMUST00000183504 95 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 Mir7039-201ENSMUST00000183852 85 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 Gm28409-201ENSMUST00000187064 103 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 Gm25797-201ENSMUST00000082640 107 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 Mir201-201ENSMUST00000083470 66 ntBASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.51□□□□□ -2.17
Rnf6Q9DBU5 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm24851-201ENSMUST00000158028 103 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Mir6388-201ENSMUST00000184417 75 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm29613-201ENSMUST00000185846 313 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm29544-201ENSMUST00000188860 313 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm9156-201ENSMUST00000189660 463 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm28808-201ENSMUST00000190978 313 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm44057-201ENSMUST00000204547 96 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm22306-201ENSMUST00000082692 107 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm25627-201ENSMUST00000084003 153 ntBASIC1.5□□□□□ -2.17
Rnf6Q9DBU5 Gm26074-201ENSMUST00000104063 129 ntBASIC1.49□□□□□ -2.17
Rnf6Q9DBU5 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.49□□□□□ -2.17
Rnf6Q9DBU5 Gm24668-201ENSMUST00000158935 104 ntBASIC1.49□□□□□ -2.17
Rnf6Q9DBU5 Gm28669-201ENSMUST00000188400 100 ntBASIC1.49□□□□□ -2.17
Rnf6Q9DBU5 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Rnf6Q9DBU5 Gm42719-201ENSMUST00000197393 355 ntBASIC1.49□□□□□ -2.17
Rnf6Q9DBU5 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC1.49□□□□□ -2.17
Rnf6Q9DBU5 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.49□□□□□ -2.17
Rnf6Q9DBU5 Gm25588-201ENSMUST00000082501 140 ntBASIC1.49□□□□□ -2.17
Rnf6Q9DBU5 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 Gm25541-201ENSMUST00000116888 126 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 Mir3057-201ENSMUST00000175040 91 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 Gm22775-201ENSMUST00000177630 120 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 Gm23569-201ENSMUST00000180120 120 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 Gm27493-201ENSMUST00000184128 78 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 Gm37116-201ENSMUST00000195161 147 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 Gm44976-201ENSMUST00000205543 261 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.48□□□□□ -2.17
Rnf6Q9DBU5 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
Rnf6Q9DBU5 Gm24379-201ENSMUST00000122695 86 ntBASIC1.47□□□□□ -2.17
Rnf6Q9DBU5 Gm24559-201ENSMUST00000157519 121 ntBASIC1.47□□□□□ -2.17
Rnf6Q9DBU5 Gm23122-201ENSMUST00000157645 103 ntBASIC1.47□□□□□ -2.17
Rnf6Q9DBU5 Gm26415-201ENSMUST00000157673 292 ntBASIC1.47□□□□□ -2.17
Rnf6Q9DBU5 Gm23303-201ENSMUST00000082714 152 ntBASIC1.47□□□□□ -2.17
Rnf6Q9DBU5 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Rnf6Q9DBU5 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Rnf6Q9DBU5 Gm25992-201ENSMUST00000102437 109 ntBASIC1.46□□□□□ -2.18
Rnf6Q9DBU5 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Rnf6Q9DBU5 Snord100-201ENSMUST00000116836 74 ntBASIC1.46□□□□□ -2.18
Rnf6Q9DBU5 Gm12309-201ENSMUST00000119889 182 ntBASIC1.46□□□□□ -2.18
Rnf6Q9DBU5 Gm13246-201ENSMUST00000120994 315 ntBASIC1.46□□□□□ -2.18
Rnf6Q9DBU5 Gm25371-201ENSMUST00000158162 101 ntBASIC1.46□□□□□ -2.18
Rnf6Q9DBU5 Gm22946-201ENSMUST00000158558 82 ntBASIC1.46□□□□□ -2.18
Rnf6Q9DBU5 Gm27934-201ENSMUST00000158795 63 ntBASIC1.46□□□□□ -2.18
Rnf6Q9DBU5 Mir6419-201ENSMUST00000184784 113 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms