Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.17□□□□□ -2.22
Ddx28Q9CWT6 Gm19790-201ENSMUST00000214414 251 ntBASIC1.17□□□□□ -2.22
Ddx28Q9CWT6 Mir186-201ENSMUST00000083497 71 ntBASIC1.17□□□□□ -2.22
Ddx28Q9CWT6 Gm25409-201ENSMUST00000083764 131 ntBASIC1.17□□□□□ -2.22
Ddx28Q9CWT6 Gm24276-201ENSMUST00000102181 110 ntBASIC1.16□□□□□ -2.22
Ddx28Q9CWT6 Gm25565-201ENSMUST00000104605 105 ntBASIC1.16□□□□□ -2.22
Ddx28Q9CWT6 Gm26363-201ENSMUST00000158866 83 ntBASIC1.16□□□□□ -2.22
Ddx28Q9CWT6 Gm27326-201ENSMUST00000183504 95 ntBASIC1.16□□□□□ -2.22
Ddx28Q9CWT6 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.16□□□□□ -2.22
Ddx28Q9CWT6 Gm26379-202ENSMUST00000200225 132 ntBASIC1.16□□□□□ -2.22
Ddx28Q9CWT6 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Ddx28Q9CWT6 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Ddx28Q9CWT6 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.15□□□□□ -2.23
Ddx28Q9CWT6 Gm24015-201ENSMUST00000157725 232 ntBASIC1.15□□□□□ -2.23
Ddx28Q9CWT6 Gm22802-201ENSMUST00000175621 89 ntBASIC1.15□□□□□ -2.23
Ddx28Q9CWT6 Gm24415-201ENSMUST00000180218 107 ntBASIC1.15□□□□□ -2.23
Ddx28Q9CWT6 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.15□□□□□ -2.23
Ddx28Q9CWT6 Mir451a-201ENSMUST00000093557 72 ntBASIC1.15□□□□□ -2.23
Ddx28Q9CWT6 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Ddx28Q9CWT6 Gm13922-201ENSMUST00000119505 156 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 Gm27672-201ENSMUST00000183751 204 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 Mir7091-201ENSMUST00000184075 79 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 Gm28862-201ENSMUST00000188246 163 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 Mir6962-201ENSMUST00000199512 63 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 Gm45002-201ENSMUST00000208045 120 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 Gm25650-201ENSMUST00000083784 162 ntBASIC1.14□□□□□ -2.23
Ddx28Q9CWT6 Gm26074-201ENSMUST00000104063 129 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm6952-201ENSMUST00000118629 159 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm22485-201ENSMUST00000157990 109 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm24808-201ENSMUST00000157993 118 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm22200-201ENSMUST00000158614 67 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm25838-201ENSMUST00000158920 120 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm16404-201ENSMUST00000177739 468 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm14598-201ENSMUST00000180109 468 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm14625-201ENSMUST00000180231 468 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm44358-201ENSMUST00000196301 98 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Mir1a-2-201ENSMUST00000198520 72 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Snora20-201ENSMUST00000082703 128 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm23377-201ENSMUST00000082943 126 ntBASIC1.13□□□□□ -2.23
Ddx28Q9CWT6 Gm14568-201ENSMUST00000119321 294 ntBASIC1.12□□□□□ -2.23
Ddx28Q9CWT6 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.12□□□□□ -2.23
Ddx28Q9CWT6 Gm24777-201ENSMUST00000157644 107 ntBASIC1.12□□□□□ -2.23
Ddx28Q9CWT6 Gm22551-201ENSMUST00000157795 103 ntBASIC1.12□□□□□ -2.23
Ddx28Q9CWT6 Gm26090-201ENSMUST00000157897 128 ntBASIC1.12□□□□□ -2.23
Ddx28Q9CWT6 Snora24-201ENSMUST00000174989 130 ntBASIC1.12□□□□□ -2.23
Ddx28Q9CWT6 Gm22621-201ENSMUST00000179678 74 ntBASIC1.12□□□□□ -2.23
Ddx28Q9CWT6 Gm23245-201ENSMUST00000083370 135 ntBASIC1.12□□□□□ -2.23
Ddx28Q9CWT6 Mir211-201ENSMUST00000083651 106 ntBASIC1.12□□□□□ -2.23
Ddx28Q9CWT6 Snord100-201ENSMUST00000116836 74 ntBASIC1.11□□□□□ -2.23
Ddx28Q9CWT6 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.11□□□□□ -2.23
Ddx28Q9CWT6 Mir3098-201ENSMUST00000175416 87 ntBASIC1.11□□□□□ -2.23
Ddx28Q9CWT6 Gm23714-201ENSMUST00000179259 105 ntBASIC1.11□□□□□ -2.23
Ddx28Q9CWT6 Gm27365-201ENSMUST00000184041 177 ntBASIC1.11□□□□□ -2.23
Ddx28Q9CWT6 Mir7665-201ENSMUST00000184907 63 ntBASIC1.11□□□□□ -2.23
Ddx28Q9CWT6 Mir721-201ENSMUST00000200230 88 ntBASIC1.11□□□□□ -2.23
Ddx28Q9CWT6 Gm23461-201ENSMUST00000083265 107 ntBASIC1.11□□□□□ -2.23
Ddx28Q9CWT6 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Mir343-201ENSMUST00000102360 75 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Gm13345-201ENSMUST00000121928 228 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Gm23083-201ENSMUST00000157851 116 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Gm24880-201ENSMUST00000158776 85 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Gm27420-201ENSMUST00000183823 79 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Gm27285-201ENSMUST00000183875 127 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Mir7063-201ENSMUST00000184158 91 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Gm27465-201ENSMUST00000184290 91 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Gm26224-201ENSMUST00000082506 80 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Gm26204-201ENSMUST00000082906 107 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Mir471-201ENSMUST00000093596 67 ntBASIC1.1□□□□□ -2.23
Ddx28Q9CWT6 Gm14567-201ENSMUST00000117155 174 ntBASIC1.09□□□□□ -2.23
Ddx28Q9CWT6 Gm22850-201ENSMUST00000157714 82 ntBASIC1.09□□□□□ -2.23
Ddx28Q9CWT6 Gm16539-201ENSMUST00000160086 327 ntBASIC1.09□□□□□ -2.23
Ddx28Q9CWT6 Gm28256-201ENSMUST00000188953 139 ntBASIC1.09□□□□□ -2.23
Ddx28Q9CWT6 Gm28559-201ENSMUST00000190532 139 ntBASIC1.09□□□□□ -2.23
Ddx28Q9CWT6 Gm42988-201ENSMUST00000198116 225 ntBASIC1.09□□□□□ -2.23
Ddx28Q9CWT6 Gm44853-201ENSMUST00000209070 250 ntBASIC1.09□□□□□ -2.23
Ddx28Q9CWT6 Gm25128-201ENSMUST00000083339 76 ntBASIC1.09□□□□□ -2.23
Ddx28Q9CWT6 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Ddx28Q9CWT6 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ddx28Q9CWT6 Gm37746-201ENSMUST00000193249 198 ntBASIC1.08□□□□□ -2.24
Ddx28Q9CWT6 Gm22980-201ENSMUST00000082608 70 ntBASIC1.08□□□□□ -2.24
Ddx28Q9CWT6 Mir302d-201ENSMUST00000083513 66 ntBASIC1.08□□□□□ -2.24
Ddx28Q9CWT6 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.08□□□□□ -2.24
Ddx28Q9CWT6 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.08□□□□□ -2.24
Ddx28Q9CWT6 Gm23114-201ENSMUST00000158478 117 ntBASIC1.07□□□□□ -2.24
Ddx28Q9CWT6 Gm22074-201ENSMUST00000158595 113 ntBASIC1.07□□□□□ -2.24
Ddx28Q9CWT6 Gm22476-201ENSMUST00000158902 100 ntBASIC1.07□□□□□ -2.24
Ddx28Q9CWT6 Gm22129-201ENSMUST00000179034 107 ntBASIC1.07□□□□□ -2.24
Ddx28Q9CWT6 Gm27803-201ENSMUST00000183763 119 ntBASIC1.07□□□□□ -2.24
Ddx28Q9CWT6 Mir7116-201ENSMUST00000195956 70 ntBASIC1.07□□□□□ -2.24
Ddx28Q9CWT6 Gm43911-201ENSMUST00000203097 76 ntBASIC1.07□□□□□ -2.24
Ddx28Q9CWT6 Gm45471-201ENSMUST00000211270 281 ntBASIC1.07□□□□□ -2.24
Ddx28Q9CWT6 Gm25943-201ENSMUST00000103791 90 ntBASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.06□□□□□ -2.24
Ddx28Q9CWT6 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms