Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm22586-201ENSMUST00000157507 122 ntBASIC0.93□□□□□ -2.26
Smc1aQ9CU62 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC0.93□□□□□ -2.26
Smc1aQ9CU62 Gm27587-201ENSMUST00000185116 163 ntBASIC0.93□□□□□ -2.26
Smc1aQ9CU62 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC0.93□□□□□ -2.26
Smc1aQ9CU62 Gm37889-201ENSMUST00000194174 251 ntBASIC0.93□□□□□ -2.26
Smc1aQ9CU62 Gm24311-201ENSMUST00000082570 104 ntBASIC0.93□□□□□ -2.26
Smc1aQ9CU62 Gm24594-201ENSMUST00000122502 99 ntBASIC0.92□□□□□ -2.26
Smc1aQ9CU62 Gm22163-201ENSMUST00000158408 135 ntBASIC0.92□□□□□ -2.26
Smc1aQ9CU62 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.92□□□□□ -2.26
Smc1aQ9CU62 Gm22704-201ENSMUST00000083027 137 ntBASIC0.92□□□□□ -2.26
Smc1aQ9CU62 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Smc1aQ9CU62 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.92□□□□□ -2.26
Smc1aQ9CU62 Gm24271-201ENSMUST00000102327 111 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Snord89-201ENSMUST00000104516 110 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm25783-201ENSMUST00000122525 190 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm23655-201ENSMUST00000122627 105 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm25720-201ENSMUST00000157503 105 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm24000-201ENSMUST00000158063 89 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm26358-201ENSMUST00000158215 97 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Mir669k-201ENSMUST00000177742 127 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm25673-201ENSMUST00000179957 127 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm43898-201ENSMUST00000204456 424 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm45859-201ENSMUST00000212794 214 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 AC154213.2-201ENSMUST00000227138 187 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm24920-201ENSMUST00000083018 85 ntBASIC0.91□□□□□ -2.26
Smc1aQ9CU62 Gm22051-201ENSMUST00000117002 127 ntBASIC0.9□□□□□ -2.27
Smc1aQ9CU62 Gm24345-201ENSMUST00000158706 124 ntBASIC0.9□□□□□ -2.27
Smc1aQ9CU62 Gm25949-201ENSMUST00000175333 114 ntBASIC0.9□□□□□ -2.27
Smc1aQ9CU62 Gm38323-201ENSMUST00000192450 210 ntBASIC0.9□□□□□ -2.27
Smc1aQ9CU62 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.9□□□□□ -2.27
Smc1aQ9CU62 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.9□□□□□ -2.27
Smc1aQ9CU62 Gm44921-201ENSMUST00000205290 301 ntBASIC0.9□□□□□ -2.27
Smc1aQ9CU62 Gm44909-201ENSMUST00000208756 165 ntBASIC0.9□□□□□ -2.27
Smc1aQ9CU62 Snord32a-201ENSMUST00000083285 83 ntBASIC0.9□□□□□ -2.27
Smc1aQ9CU62 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
Smc1aQ9CU62 Mir654-201ENSMUST00000104787 84 ntBASIC0.89□□□□□ -2.27
Smc1aQ9CU62 Gm14671-201ENSMUST00000121790 262 ntBASIC0.89□□□□□ -2.27
Smc1aQ9CU62 Gm26026-201ENSMUST00000122726 123 ntBASIC0.89□□□□□ -2.27
Smc1aQ9CU62 Gm23584-201ENSMUST00000157655 129 ntBASIC0.89□□□□□ -2.27
Smc1aQ9CU62 Gm26073-201ENSMUST00000179906 127 ntBASIC0.89□□□□□ -2.27
Smc1aQ9CU62 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Smc1aQ9CU62 Gm23130-201ENSMUST00000104252 74 ntBASIC0.88□□□□□ -2.27
Smc1aQ9CU62 Gm14568-201ENSMUST00000119321 294 ntBASIC0.88□□□□□ -2.27
Smc1aQ9CU62 Gm27585-201ENSMUST00000183717 199 ntBASIC0.88□□□□□ -2.27
Smc1aQ9CU62 Gm42988-201ENSMUST00000198116 225 ntBASIC0.88□□□□□ -2.27
Smc1aQ9CU62 Gm45471-201ENSMUST00000211270 281 ntBASIC0.88□□□□□ -2.27
Smc1aQ9CU62 Mir695-201ENSMUST00000102261 109 ntBASIC0.87□□□□□ -2.27
Smc1aQ9CU62 Gm25787-201ENSMUST00000104709 92 ntBASIC0.87□□□□□ -2.27
Smc1aQ9CU62 Gm22914-201ENSMUST00000175195 77 ntBASIC0.87□□□□□ -2.27
Smc1aQ9CU62 Gm25935-201ENSMUST00000178746 107 ntBASIC0.87□□□□□ -2.27
Smc1aQ9CU62 Gm22283-201ENSMUST00000082556 161 ntBASIC0.87□□□□□ -2.27
Smc1aQ9CU62 Mir146-201ENSMUST00000083667 65 ntBASIC0.87□□□□□ -2.27
Smc1aQ9CU62 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm26338-201ENSMUST00000102372 110 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm26293-201ENSMUST00000104170 84 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm26415-201ENSMUST00000157673 292 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm28020-201ENSMUST00000157739 67 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm20386-201ENSMUST00000174010 132 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm27365-201ENSMUST00000184041 177 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm28256-201ENSMUST00000188953 139 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm28559-201ENSMUST00000190532 139 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Ighv12-2-201ENSMUST00000191949 362 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm18213-201ENSMUST00000207850 178 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm45544-201ENSMUST00000211130 88 ntBASIC0.86□□□□□ -2.27
Smc1aQ9CU62 Gm25878-201ENSMUST00000104327 93 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Gm23841-201ENSMUST00000116951 114 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Gm15069-201ENSMUST00000117792 192 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Gm11936-201ENSMUST00000118323 160 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Gm15068-201ENSMUST00000119796 192 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Gm13246-201ENSMUST00000120994 315 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Gm24015-201ENSMUST00000157725 232 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Gm22200-201ENSMUST00000158614 67 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Mir3109-201ENSMUST00000175301 88 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Snora15-201ENSMUST00000177461 131 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Gm25141-201ENSMUST00000083177 107 ntBASIC0.85□□□□□ -2.27
Smc1aQ9CU62 Gm13577-201ENSMUST00000121365 205 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 Gm24635-201ENSMUST00000122712 128 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 Gm25838-201ENSMUST00000158920 120 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 Gm24323-201ENSMUST00000175342 77 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 Gm38113-201ENSMUST00000193704 201 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 DQ267101-201ENSMUST00000082562 73 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 Snora20-201ENSMUST00000082703 128 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 Gm22686-201ENSMUST00000082847 100 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 Mir33-201ENSMUST00000083531 69 ntBASIC0.84□□□□□ -2.27
Smc1aQ9CU62 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Smc1aQ9CU62 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Smc1aQ9CU62 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Smc1aQ9CU62 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.83□□□□□ -2.28
Smc1aQ9CU62 Mir541-201ENSMUST00000102097 90 ntBASIC0.83□□□□□ -2.28
Smc1aQ9CU62 Gm24579-201ENSMUST00000103964 144 ntBASIC0.83□□□□□ -2.28
Smc1aQ9CU62 Gm24171-201ENSMUST00000104126 131 ntBASIC0.83□□□□□ -2.28
Smc1aQ9CU62 Gm25544-201ENSMUST00000122676 120 ntBASIC0.83□□□□□ -2.28
Smc1aQ9CU62 Gm24880-201ENSMUST00000158776 85 ntBASIC0.83□□□□□ -2.28
Smc1aQ9CU62 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.83□□□□□ -2.28
Smc1aQ9CU62 Gm23970-201ENSMUST00000083319 107 ntBASIC0.83□□□□□ -2.28
Smc1aQ9CU62 Mir384-201ENSMUST00000083565 88 ntBASIC0.83□□□□□ -2.28
Smc1aQ9CU62 Gm23126-201ENSMUST00000104260 134 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 177.9 ms