Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm23838-201ENSMUST00000158067 162 ntBASIC0.25□□□□□ -2.37
RTRAFQ9CQE8 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.25□□□□□ -2.37
RTRAFQ9CQE8 Mir6240-201ENSMUST00000184281 117 ntBASIC0.25□□□□□ -2.37
RTRAFQ9CQE8 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC0.25□□□□□ -2.37
RTRAFQ9CQE8 Gm45313-201ENSMUST00000210584 178 ntBASIC0.25□□□□□ -2.37
RTRAFQ9CQE8 Gm24624-201ENSMUST00000082617 164 ntBASIC0.25□□□□□ -2.37
RTRAFQ9CQE8 Gm15289-201ENSMUST00000117793 244 ntBASIC0.24□□□□□ -2.37
RTRAFQ9CQE8 Gm13797-201ENSMUST00000121792 120 ntBASIC0.24□□□□□ -2.37
RTRAFQ9CQE8 Gm24635-201ENSMUST00000122712 128 ntBASIC0.24□□□□□ -2.37
RTRAFQ9CQE8 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
RTRAFQ9CQE8 Gm22887-201ENSMUST00000178586 107 ntBASIC0.24□□□□□ -2.37
RTRAFQ9CQE8 Gm45541-201ENSMUST00000210443 54 ntBASIC0.24□□□□□ -2.37
RTRAFQ9CQE8 Gm26447-201ENSMUST00000082448 129 ntBASIC0.24□□□□□ -2.37
RTRAFQ9CQE8 Gm25634-201ENSMUST00000082667 105 ntBASIC0.24□□□□□ -2.37
RTRAFQ9CQE8 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm26076-201ENSMUST00000104065 105 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Mir875-201ENSMUST00000104698 78 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Mir466f-3-201ENSMUST00000104788 94 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm12771-201ENSMUST00000120246 135 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm23655-201ENSMUST00000122627 105 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm22836-201ENSMUST00000158441 61 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm26402-201ENSMUST00000158499 113 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm25235-201ENSMUST00000179933 107 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm24920-201ENSMUST00000083018 85 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Mir30a-201ENSMUST00000083471 71 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm25512-201ENSMUST00000083863 107 ntBASIC0.23□□□□□ -2.37
RTRAFQ9CQE8 Gm24423-201ENSMUST00000101982 106 ntBASIC0.22□□□□□ -2.37
RTRAFQ9CQE8 Gm22469-201ENSMUST00000104118 133 ntBASIC0.22□□□□□ -2.37
RTRAFQ9CQE8 Gm11904-201ENSMUST00000120562 248 ntBASIC0.22□□□□□ -2.37
RTRAFQ9CQE8 Gm23605-201ENSMUST00000157255 127 ntBASIC0.22□□□□□ -2.37
RTRAFQ9CQE8 Gm24547-201ENSMUST00000158649 149 ntBASIC0.22□□□□□ -2.37
RTRAFQ9CQE8 Mir7052-201ENSMUST00000184821 65 ntBASIC0.22□□□□□ -2.37
RTRAFQ9CQE8 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.22□□□□□ -2.37
RTRAFQ9CQE8 AC168062.3-201ENSMUST00000227025 165 ntBASIC0.22□□□□□ -2.37
RTRAFQ9CQE8 Gm26082-201ENSMUST00000104070 127 ntBASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 Gm22479-201ENSMUST00000122566 81 ntBASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 Gm22767-201ENSMUST00000158365 165 ntBASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 Gm24549-201ENSMUST00000158647 139 ntBASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 Gm27475-201ENSMUST00000183420 61 ntBASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 Mir7065-201ENSMUST00000185110 61 ntBASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 AL627387.1-201ENSMUST00000226063 250 ntBASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 Mir532-201ENSMUST00000093630 96 ntBASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
RTRAFQ9CQE8 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm23011-201ENSMUST00000104148 132 ntBASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm13922-201ENSMUST00000119505 156 ntBASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm24509-201ENSMUST00000157086 101 ntBASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm25358-201ENSMUST00000157189 101 ntBASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm25901-201ENSMUST00000158494 130 ntBASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm23002-201ENSMUST00000179221 107 ntBASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm27845-201ENSMUST00000184479 114 ntBASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 AL928567.1-201ENSMUST00000197891 138 ntBASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm23969-201ENSMUST00000083324 74 ntBASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.2□□□□□ -2.38
RTRAFQ9CQE8 Gm25323-201ENSMUST00000122555 103 ntBASIC0.19□□□□□ -2.38
RTRAFQ9CQE8 Gm26116-201ENSMUST00000175600 77 ntBASIC0.19□□□□□ -2.38
RTRAFQ9CQE8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.19□□□□□ -2.38
RTRAFQ9CQE8 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.19□□□□□ -2.38
RTRAFQ9CQE8 Gm24527-201ENSMUST00000082920 107 ntBASIC0.19□□□□□ -2.38
RTRAFQ9CQE8 Gm26123-201ENSMUST00000083363 135 ntBASIC0.19□□□□□ -2.38
RTRAFQ9CQE8 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.18□□□□□ -2.38
RTRAFQ9CQE8 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
RTRAFQ9CQE8 Gm23989-201ENSMUST00000117030 66 ntBASIC0.18□□□□□ -2.38
RTRAFQ9CQE8 Gm22520-201ENSMUST00000158269 129 ntBASIC0.18□□□□□ -2.38
RTRAFQ9CQE8 Mir6336-201ENSMUST00000183581 130 ntBASIC0.18□□□□□ -2.38
RTRAFQ9CQE8 Gm27894-201ENSMUST00000184177 92 ntBASIC0.18□□□□□ -2.38
RTRAFQ9CQE8 Gm27747-201ENSMUST00000184707 85 ntBASIC0.18□□□□□ -2.38
RTRAFQ9CQE8 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.18□□□□□ -2.38
RTRAFQ9CQE8 Gm24258-201ENSMUST00000083739 133 ntBASIC0.18□□□□□ -2.38
RTRAFQ9CQE8 Gm23466-201ENSMUST00000157133 106 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Gm22491-201ENSMUST00000157190 102 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Gm23219-201ENSMUST00000158123 87 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Gm22239-201ENSMUST00000175220 103 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Gm22466-201ENSMUST00000175278 69 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Mir1954-201ENSMUST00000175595 86 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Gm22686-201ENSMUST00000082847 100 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Mir181b-2-201ENSMUST00000083644 89 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Gm22753-201ENSMUST00000083657 107 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Gm24764-201ENSMUST00000083686 199 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Gm10222-201ENSMUST00000088336 294 ntBASIC0.17□□□□□ -2.38
RTRAFQ9CQE8 Gm25377-201ENSMUST00000104334 129 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm14792-201ENSMUST00000119725 258 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm24728-201ENSMUST00000158226 125 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm24006-201ENSMUST00000158462 132 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm25771-201ENSMUST00000158565 144 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Mir6365-201ENSMUST00000183990 101 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Mir6390-201ENSMUST00000184405 129 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm28925-201ENSMUST00000188586 168 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm29107-201ENSMUST00000190910 347 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm37715-201ENSMUST00000193206 235 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm44828-201ENSMUST00000203745 106 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm25814-201ENSMUST00000082754 107 ntBASIC0.16□□□□□ -2.38
RTRAFQ9CQE8 Gm22576-201ENSMUST00000083733 104 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 158.6 ms