Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.25□□□□□ -2.45
Rpa3Q9CQ71 Gm24393-201ENSMUST00000158135 97 ntBASIC-0.25□□□□□ -2.45
Rpa3Q9CQ71 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.25□□□□□ -2.45
Rpa3Q9CQ71 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.25□□□□□ -2.45
Rpa3Q9CQ71 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC-0.25□□□□□ -2.45
Rpa3Q9CQ71 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.25□□□□□ -2.45
Rpa3Q9CQ71 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.25□□□□□ -2.45
Rpa3Q9CQ71 Gm25414-201ENSMUST00000101814 107 ntBASIC-0.26□□□□□ -2.45
Rpa3Q9CQ71 Gm15002-201ENSMUST00000118406 452 ntBASIC-0.26□□□□□ -2.45
Rpa3Q9CQ71 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC-0.26□□□□□ -2.45
Rpa3Q9CQ71 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.26□□□□□ -2.45
Rpa3Q9CQ71 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.26□□□□□ -2.45
Rpa3Q9CQ71 Gm43624-201ENSMUST00000197368 180 ntBASIC-0.26□□□□□ -2.45
Rpa3Q9CQ71 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.26□□□□□ -2.45
Rpa3Q9CQ71 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.26□□□□□ -2.45
Rpa3Q9CQ71 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.26□□□□□ -2.45
Rpa3Q9CQ71 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Gm16356-201ENSMUST00000143300 169 ntBASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Gm22321-201ENSMUST00000157152 104 ntBASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 CT025526.1-201ENSMUST00000217327 267 ntBASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Gm24035-201ENSMUST00000082867 107 ntBASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Snord85-201ENSMUST00000083262 73 ntBASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Mir532-201ENSMUST00000093630 96 ntBASIC-0.27□□□□□ -2.45
Rpa3Q9CQ71 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.28□□□□□ -2.45
Rpa3Q9CQ71 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.28□□□□□ -2.45
Rpa3Q9CQ71 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.28□□□□□ -2.45
Rpa3Q9CQ71 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.28□□□□□ -2.45
Rpa3Q9CQ71 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.28□□□□□ -2.45
Rpa3Q9CQ71 Gm25929-201ENSMUST00000082784 107 ntBASIC-0.28□□□□□ -2.45
Rpa3Q9CQ71 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.28□□□□□ -2.45
Rpa3Q9CQ71 Gm26111-201ENSMUST00000083969 106 ntBASIC-0.28□□□□□ -2.45
Rpa3Q9CQ71 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.29□□□□□ -2.46
Rpa3Q9CQ71 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.29□□□□□ -2.46
Rpa3Q9CQ71 Gm28849-201ENSMUST00000188127 174 ntBASIC-0.29□□□□□ -2.46
Rpa3Q9CQ71 Gm37586-201ENSMUST00000193654 204 ntBASIC-0.29□□□□□ -2.46
Rpa3Q9CQ71 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.29□□□□□ -2.46
Rpa3Q9CQ71 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
Rpa3Q9CQ71 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.29□□□□□ -2.46
Rpa3Q9CQ71 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Gm23982-201ENSMUST00000157141 106 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Gm22553-201ENSMUST00000157797 295 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Mir191-201ENSMUST00000196210 74 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 AL627387.1-201ENSMUST00000226063 250 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.3□□□□□ -2.46
Rpa3Q9CQ71 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.31□□□□□ -2.46
Rpa3Q9CQ71 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.31□□□□□ -2.46
Rpa3Q9CQ71 Gm23262-201ENSMUST00000158323 168 ntBASIC-0.31□□□□□ -2.46
Rpa3Q9CQ71 Snora19-201ENSMUST00000082962 132 ntBASIC-0.31□□□□□ -2.46
Rpa3Q9CQ71 Gm23658-201ENSMUST00000083233 132 ntBASIC-0.31□□□□□ -2.46
Rpa3Q9CQ71 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm11834-201ENSMUST00000122257 585 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm25827-201ENSMUST00000157089 107 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm37338-201ENSMUST00000191986 127 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm45197-201ENSMUST00000205288 151 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm44959-201ENSMUST00000209127 231 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.32□□□□□ -2.46
Rpa3Q9CQ71 Gm22340-201ENSMUST00000157717 114 ntBASIC-0.33□□□□□ -2.46
Rpa3Q9CQ71 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.33□□□□□ -2.46
Rpa3Q9CQ71 Gm23793-201ENSMUST00000179396 117 ntBASIC-0.33□□□□□ -2.46
Rpa3Q9CQ71 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.33□□□□□ -2.46
Rpa3Q9CQ71 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.33□□□□□ -2.46
Rpa3Q9CQ71 Mir721-201ENSMUST00000200230 88 ntBASIC-0.33□□□□□ -2.46
Rpa3Q9CQ71 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.34□□□□□ -2.46
Rpa3Q9CQ71 Gm23640-201ENSMUST00000157860 104 ntBASIC-0.34□□□□□ -2.46
Rpa3Q9CQ71 Gm38050-201ENSMUST00000191904 238 ntBASIC-0.34□□□□□ -2.46
Rpa3Q9CQ71 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.34□□□□□ -2.46
Rpa3Q9CQ71 Mir377-201ENSMUST00000083504 68 ntBASIC-0.34□□□□□ -2.46
Rpa3Q9CQ71 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
Rpa3Q9CQ71 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
Rpa3Q9CQ71 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.35□□□□□ -2.47
Rpa3Q9CQ71 Gm23779-201ENSMUST00000157938 64 ntBASIC-0.35□□□□□ -2.47
Rpa3Q9CQ71 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.35□□□□□ -2.47
Rpa3Q9CQ71 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.35□□□□□ -2.47
Rpa3Q9CQ71 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.35□□□□□ -2.47
Rpa3Q9CQ71 Gm25937-201ENSMUST00000083912 107 ntBASIC-0.35□□□□□ -2.47
Rpa3Q9CQ71 Gm42606-201ENSMUST00000114209 239 ntBASIC-0.36□□□□□ -2.47
Rpa3Q9CQ71 Gm24275-201ENSMUST00000116780 146 ntBASIC-0.36□□□□□ -2.47
Rpa3Q9CQ71 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.36□□□□□ -2.47
Rpa3Q9CQ71 Gm23278-201ENSMUST00000157911 143 ntBASIC-0.36□□□□□ -2.47
Rpa3Q9CQ71 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.36□□□□□ -2.47
Rpa3Q9CQ71 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
Rpa3Q9CQ71 Gm24204-201ENSMUST00000082950 107 ntBASIC-0.36□□□□□ -2.47
Rpa3Q9CQ71 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.36□□□□□ -2.47
Rpa3Q9CQ71 Gm22097-201ENSMUST00000157929 278 ntBASIC-0.37□□□□□ -2.47
Rpa3Q9CQ71 AL935138.1-201ENSMUST00000215309 196 ntBASIC-0.37□□□□□ -2.47
Rpa3Q9CQ71 Gm23140-201ENSMUST00000082487 107 ntBASIC-0.37□□□□□ -2.47
Rpa3Q9CQ71 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 131.6 ms