Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm24678-201ENSMUST00000158756 104 ntBASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 Gm28435-201ENSMUST00000185496 108 ntBASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 AC125374.2-201ENSMUST00000214278 162 ntBASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 Snord33-201ENSMUST00000083694 84 ntBASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.63□□□□□ -2.31
Sf3b1Q99NB9 Mir669i-201ENSMUST00000117007 127 ntBASIC0.62□□□□□ -2.31
Sf3b1Q99NB9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.62□□□□□ -2.31
Sf3b1Q99NB9 Mir6350-201ENSMUST00000183639 105 ntBASIC0.62□□□□□ -2.31
Sf3b1Q99NB9 Gm44373-201ENSMUST00000196112 169 ntBASIC0.62□□□□□ -2.31
Sf3b1Q99NB9 Mir219b-201ENSMUST00000198317 65 ntBASIC0.62□□□□□ -2.31
Sf3b1Q99NB9 Gm44055-201ENSMUST00000204376 247 ntBASIC0.62□□□□□ -2.31
Sf3b1Q99NB9 Gm45471-201ENSMUST00000211270 281 ntBASIC0.62□□□□□ -2.31
Sf3b1Q99NB9 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.62□□□□□ -2.31
Sf3b1Q99NB9 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.62□□□□□ -2.31
Sf3b1Q99NB9 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Gm25509-201ENSMUST00000116985 106 ntBASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Gm25968-201ENSMUST00000157167 100 ntBASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Gm23605-201ENSMUST00000157255 127 ntBASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Gm22163-201ENSMUST00000158408 135 ntBASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Gm25024-201ENSMUST00000179667 104 ntBASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Gm37997-201ENSMUST00000193515 267 ntBASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Mir3970-201ENSMUST00000199287 90 ntBASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.61□□□□□ -2.31
Sf3b1Q99NB9 Gm22784-201ENSMUST00000104088 132 ntBASIC0.6□□□□□ -2.31
Sf3b1Q99NB9 Gm25878-201ENSMUST00000104327 93 ntBASIC0.6□□□□□ -2.31
Sf3b1Q99NB9 Mir875-201ENSMUST00000104698 78 ntBASIC0.6□□□□□ -2.31
Sf3b1Q99NB9 Gm12797-201ENSMUST00000118645 273 ntBASIC0.6□□□□□ -2.31
Sf3b1Q99NB9 Gm11904-201ENSMUST00000120562 248 ntBASIC0.6□□□□□ -2.31
Sf3b1Q99NB9 Gm26415-201ENSMUST00000157673 292 ntBASIC0.6□□□□□ -2.31
Sf3b1Q99NB9 Gm23347-201ENSMUST00000083823 82 ntBASIC0.6□□□□□ -2.31
Sf3b1Q99NB9 Gm10222-201ENSMUST00000088336 294 ntBASIC0.6□□□□□ -2.31
Sf3b1Q99NB9 Mir451a-201ENSMUST00000093557 72 ntBASIC0.6□□□□□ -2.31
Sf3b1Q99NB9 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
Sf3b1Q99NB9 Gm26274-201ENSMUST00000157103 321 ntBASIC0.59□□□□□ -2.32
Sf3b1Q99NB9 Gm25424-201ENSMUST00000157612 58 ntBASIC0.59□□□□□ -2.32
Sf3b1Q99NB9 Gm23579-201ENSMUST00000158528 103 ntBASIC0.59□□□□□ -2.32
Sf3b1Q99NB9 Gm36189-201ENSMUST00000204113 523 ntBASIC0.59□□□□□ -2.32
Sf3b1Q99NB9 Snora20-201ENSMUST00000082703 128 ntBASIC0.59□□□□□ -2.32
Sf3b1Q99NB9 Gm24171-201ENSMUST00000104126 131 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Snord89-201ENSMUST00000104516 110 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm22796-201ENSMUST00000157234 106 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm26090-201ENSMUST00000157897 128 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm26482-201ENSMUST00000158015 62 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm22387-201ENSMUST00000158191 131 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm26287-201ENSMUST00000158887 81 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm27747-201ENSMUST00000184707 85 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm44563-201ENSMUST00000207958 178 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 AC116460.1-201ENSMUST00000219040 313 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm25142-201ENSMUST00000082698 107 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm23451-201ENSMUST00000083328 122 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Sf3b1Q99NB9 Gm24423-201ENSMUST00000101982 106 ntBASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 Gm12771-201ENSMUST00000120246 135 ntBASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 Gm24392-201ENSMUST00000158136 103 ntBASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 Gm24634-201ENSMUST00000158672 107 ntBASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 Gm24667-201ENSMUST00000158938 103 ntBASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 Gm36956-201ENSMUST00000193830 214 ntBASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 Gm22302-201ENSMUST00000082657 106 ntBASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 Gm24616-201ENSMUST00000083274 139 ntBASIC0.57□□□□□ -2.32
Sf3b1Q99NB9 Gm15069-201ENSMUST00000117792 192 ntBASIC0.56□□□□□ -2.32
Sf3b1Q99NB9 Gm15068-201ENSMUST00000119796 192 ntBASIC0.56□□□□□ -2.32
Sf3b1Q99NB9 Gm23581-201ENSMUST00000158531 63 ntBASIC0.56□□□□□ -2.32
Sf3b1Q99NB9 Gm16404-201ENSMUST00000177739 468 ntBASIC0.56□□□□□ -2.32
Sf3b1Q99NB9 Gm14598-201ENSMUST00000180109 468 ntBASIC0.56□□□□□ -2.32
Sf3b1Q99NB9 Gm14625-201ENSMUST00000180231 468 ntBASIC0.56□□□□□ -2.32
Sf3b1Q99NB9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.56□□□□□ -2.32
Sf3b1Q99NB9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC0.56□□□□□ -2.32
Sf3b1Q99NB9 Gm14792-201ENSMUST00000119725 258 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Gm12837-201ENSMUST00000120131 373 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Gm11388-201ENSMUST00000120908 159 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Gm23783-201ENSMUST00000157941 102 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Gm26402-201ENSMUST00000158499 113 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Gm25235-201ENSMUST00000179933 107 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Gm44977-201ENSMUST00000205283 420 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Gm23140-201ENSMUST00000082487 107 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.55□□□□□ -2.32
Sf3b1Q99NB9 Gm11322-201ENSMUST00000118095 435 ntBASIC0.54□□□□□ -2.32
Sf3b1Q99NB9 Gm13246-201ENSMUST00000120994 315 ntBASIC0.54□□□□□ -2.32
Sf3b1Q99NB9 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC0.54□□□□□ -2.32
Sf3b1Q99NB9 Gm22586-201ENSMUST00000157507 122 ntBASIC0.54□□□□□ -2.32
Sf3b1Q99NB9 Gm23219-201ENSMUST00000158123 87 ntBASIC0.54□□□□□ -2.32
Sf3b1Q99NB9 Mir6336-201ENSMUST00000183581 130 ntBASIC0.54□□□□□ -2.32
Sf3b1Q99NB9 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.54□□□□□ -2.32
Sf3b1Q99NB9 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.54□□□□□ -2.32
Sf3b1Q99NB9 Gm25787-201ENSMUST00000104709 92 ntBASIC0.53□□□□□ -2.32
Sf3b1Q99NB9 Gm25111-201ENSMUST00000116686 147 ntBASIC0.53□□□□□ -2.32
Sf3b1Q99NB9 Gm24385-201ENSMUST00000122694 350 ntBASIC0.53□□□□□ -2.32
Sf3b1Q99NB9 Gm24015-201ENSMUST00000157725 232 ntBASIC0.53□□□□□ -2.32
Sf3b1Q99NB9 Gm22522-201ENSMUST00000158271 151 ntBASIC0.53□□□□□ -2.32
Sf3b1Q99NB9 Gm22431-201ENSMUST00000158545 107 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 200 ms