Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm11856-201ENSMUST00000118712 276 ntBASIC2.21□□□□□ -2.06
Pcdha1Q91Y21 Gm14946-201ENSMUST00000119859 296 ntBASIC2.21□□□□□ -2.06
Pcdha1Q91Y21 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.21□□□□□ -2.06
Pcdha1Q91Y21 Gm25623-201ENSMUST00000157216 108 ntBASIC2.21□□□□□ -2.06
Pcdha1Q91Y21 Gm24718-201ENSMUST00000157521 136 ntBASIC2.21□□□□□ -2.06
Pcdha1Q91Y21 Gm25815-201ENSMUST00000082755 107 ntBASIC2.21□□□□□ -2.06
Pcdha1Q91Y21 Snord64-201ENSMUST00000104003 67 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Mir880-201ENSMUST00000104809 78 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Gm24907-201ENSMUST00000116932 128 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Gm23434-201ENSMUST00000157179 100 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Gm22796-201ENSMUST00000157234 106 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Gm24246-201ENSMUST00000157315 132 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Gm23253-201ENSMUST00000157441 104 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Gm37557-201ENSMUST00000191640 139 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 AC126691.1-201ENSMUST00000226534 202 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Gm25796-201ENSMUST00000082645 163 ntBASIC2.2□□□□□ -2.06
Pcdha1Q91Y21 Gm26154-201ENSMUST00000102339 96 ntBASIC2.19□□□□□ -2.06
Pcdha1Q91Y21 Gm23208-201ENSMUST00000158666 127 ntBASIC2.19□□□□□ -2.06
Pcdha1Q91Y21 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.19□□□□□ -2.06
Pcdha1Q91Y21 Gm24366-201ENSMUST00000175383 86 ntBASIC2.19□□□□□ -2.06
Pcdha1Q91Y21 Mir6406-201ENSMUST00000183592 120 ntBASIC2.19□□□□□ -2.06
Pcdha1Q91Y21 Gm43865-201ENSMUST00000204721 127 ntBASIC2.19□□□□□ -2.06
Pcdha1Q91Y21 Snora20-201ENSMUST00000082703 128 ntBASIC2.19□□□□□ -2.06
Pcdha1Q91Y21 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
Pcdha1Q91Y21 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Pcdha1Q91Y21 Gm24098-201ENSMUST00000102075 109 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm25381-201ENSMUST00000102078 109 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm23950-201ENSMUST00000104026 129 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm14588-201ENSMUST00000119895 172 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm24250-201ENSMUST00000157320 135 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm23996-201ENSMUST00000158062 131 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm25750-201ENSMUST00000175483 112 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm23770-201ENSMUST00000178009 108 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm22832-201ENSMUST00000178022 108 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm23863-201ENSMUST00000178265 108 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm24828-201ENSMUST00000178507 108 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm23052-201ENSMUST00000178633 108 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm25729-201ENSMUST00000179050 108 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm25359-201ENSMUST00000179315 108 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm22624-201ENSMUST00000179913 108 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm24030-201ENSMUST00000083931 164 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm18795-202ENSMUST00000223373 2920 ntBASIC2.18□□□□□ -2.06
Pcdha1Q91Y21 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 BC022960-201ENSMUST00000119987 1815 ntBASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 Gm22554-201ENSMUST00000157798 147 ntBASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 Gm22803-201ENSMUST00000158049 283 ntBASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 Mir6928-201ENSMUST00000185166 70 ntBASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 Gm43512-201ENSMUST00000198495 176 ntBASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 AC147101.2-201ENSMUST00000219756 184 ntBASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 Gm25006-201ENSMUST00000083813 107 ntBASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Pcdha1Q91Y21 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Pcdha1Q91Y21 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Pcdha1Q91Y21 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.16□□□□□ -2.06
Pcdha1Q91Y21 Gm23011-201ENSMUST00000104148 132 ntBASIC2.16□□□□□ -2.06
Pcdha1Q91Y21 Gm23048-201ENSMUST00000157237 129 ntBASIC2.16□□□□□ -2.06
Pcdha1Q91Y21 Gm27722-201ENSMUST00000183908 76 ntBASIC2.16□□□□□ -2.06
Pcdha1Q91Y21 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Pcdha1Q91Y21 Gm26456-201ENSMUST00000082831 111 ntBASIC2.16□□□□□ -2.06
Pcdha1Q91Y21 Snora69-201ENSMUST00000083708 131 ntBASIC2.16□□□□□ -2.06
Pcdha1Q91Y21 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
Pcdha1Q91Y21 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.15□□□□□ -2.06
Pcdha1Q91Y21 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Gm26076-201ENSMUST00000104065 105 ntBASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Gm15289-201ENSMUST00000117793 244 ntBASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Gm12309-201ENSMUST00000119889 182 ntBASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Gm22099-201ENSMUST00000157925 123 ntBASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Gm26213-201ENSMUST00000158582 110 ntBASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Gm24842-201ENSMUST00000158681 54 ntBASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Gm27443-201ENSMUST00000184660 98 ntBASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Gm42855-201ENSMUST00000197388 253 ntBASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Mir221-201ENSMUST00000083488 95 ntBASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Pcdha1Q91Y21 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm22003-201ENSMUST00000101885 107 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm6444-201ENSMUST00000119611 458 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm26345-201ENSMUST00000157534 120 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm26090-201ENSMUST00000157897 128 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm25367-201ENSMUST00000158846 106 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm22708-201ENSMUST00000158987 103 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Mir3057-201ENSMUST00000175040 91 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm22756-201ENSMUST00000180118 107 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Mir7026-201ENSMUST00000184384 67 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm26054-201ENSMUST00000083037 107 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm22884-201ENSMUST00000083127 140 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Gm24492-201ENSMUST00000083798 107 ntBASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Pcdha1Q91Y21 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Pcdha1Q91Y21 Gm25089-201ENSMUST00000102015 79 ntBASIC2.13□□□□□ -2.07
Pcdha1Q91Y21 Gm25938-201ENSMUST00000104139 166 ntBASIC2.13□□□□□ -2.07
Pcdha1Q91Y21 Gm25840-201ENSMUST00000177821 79 ntBASIC2.13□□□□□ -2.07
Pcdha1Q91Y21 Gm24952-201ENSMUST00000177909 79 ntBASIC2.13□□□□□ -2.07
Pcdha1Q91Y21 Gm23682-201ENSMUST00000178146 79 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms