Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm26074-201ENSMUST00000104063 129 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Mir669d-201ENSMUST00000104644 121 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm11856-201ENSMUST00000118712 276 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm25423-201ENSMUST00000157609 107 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm22842-201ENSMUST00000157709 118 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm25836-201ENSMUST00000158918 123 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm23337-201ENSMUST00000158959 118 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm23339-201ENSMUST00000158962 139 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm25750-201ENSMUST00000175483 112 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm22286-201ENSMUST00000179708 107 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm43749-201ENSMUST00000199345 352 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm25081-201ENSMUST00000082534 108 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm22884-201ENSMUST00000083127 140 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm22723-201ENSMUST00000083820 129 ntBASIC1.24□□□□□ -2.21
Ccdc28bQ8CEG5 Gm26412-201ENSMUST00000157666 55 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm22099-201ENSMUST00000157925 123 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm22485-201ENSMUST00000157990 109 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm22803-201ENSMUST00000158049 283 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm24394-201ENSMUST00000158141 123 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm24001-201ENSMUST00000158463 85 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm22664-201ENSMUST00000158719 105 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm27934-201ENSMUST00000158795 63 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 CT030645.1-201ENSMUST00000224020 231 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm22283-201ENSMUST00000082556 161 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm23245-201ENSMUST00000083370 135 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Mir489-201ENSMUST00000093599 107 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.23□□□□□ -2.21
Ccdc28bQ8CEG5 Gm23950-201ENSMUST00000104026 129 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 n-R5s73-201ENSMUST00000122508 107 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Gm23122-201ENSMUST00000157645 103 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Gm26213-201ENSMUST00000158582 110 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Mir3061-201ENSMUST00000175129 91 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Gm26073-201ENSMUST00000179906 127 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Gm42855-201ENSMUST00000197388 253 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Gm42988-201ENSMUST00000198116 225 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Gm43381-201ENSMUST00000198553 165 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Gm25855-201ENSMUST00000082787 72 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Mir201-201ENSMUST00000083470 66 ntBASIC1.22□□□□□ -2.21
Ccdc28bQ8CEG5 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Gm24232-201ENSMUST00000104314 132 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Mir5104-201ENSMUST00000175319 94 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Gm22699-201ENSMUST00000175376 105 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Gm23419-201ENSMUST00000175523 84 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Mir7675-201ENSMUST00000184262 58 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Gm43512-201ENSMUST00000198495 176 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Gm44976-201ENSMUST00000205543 261 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 AL627387.1-201ENSMUST00000226063 250 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Mir211-201ENSMUST00000083651 106 ntBASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Ccdc28bQ8CEG5 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Gm23578-201ENSMUST00000103943 104 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Gm26018-201ENSMUST00000104406 128 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Gm23170-201ENSMUST00000157158 106 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Gm23048-201ENSMUST00000157237 129 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Gm25364-201ENSMUST00000158851 107 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Gm23567-201ENSMUST00000178005 107 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Gm45654-201ENSMUST00000210980 123 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Snord14a-201ENSMUST00000082807 87 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Gm24523-201ENSMUST00000083965 132 ntBASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC1.2□□□□□ -2.22
Ccdc28bQ8CEG5 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Gm25485-201ENSMUST00000104120 132 ntBASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Gm24054-201ENSMUST00000158619 105 ntBASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Gm22139-201ENSMUST00000158747 105 ntBASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Traj60-201ENSMUST00000167781 54 ntBASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Mir7091-201ENSMUST00000184075 79 ntBASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Gm25820-202ENSMUST00000197479 128 ntBASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Gm25588-201ENSMUST00000082501 140 ntBASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Ccdc28bQ8CEG5 Gm24263-201ENSMUST00000104059 107 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Gm23320-201ENSMUST00000104462 127 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Gm13588-201ENSMUST00000120026 135 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Gm22790-201ENSMUST00000157229 129 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Gm17020-201ENSMUST00000172274 274 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Gm22403-201ENSMUST00000174919 84 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Gm45268-201ENSMUST00000210046 370 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 AC168880.2-201ENSMUST00000224488 201 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Gm25038-201ENSMUST00000082928 130 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Gm23678-201ENSMUST00000083157 107 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Snord61-201ENSMUST00000083176 71 ntBASIC1.18□□□□□ -2.22
Ccdc28bQ8CEG5 Gm22373-201ENSMUST00000104584 89 ntBASIC1.17□□□□□ -2.22
Ccdc28bQ8CEG5 Gm14882-201ENSMUST00000117216 218 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 218.3 ms