Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.2□□□□□ -2.22
Upk3bQ80YF6 Gm25750-201ENSMUST00000175483 112 ntBASIC1.2□□□□□ -2.22
Upk3bQ80YF6 Gm25730-201ENSMUST00000178753 165 ntBASIC1.2□□□□□ -2.22
Upk3bQ80YF6 Gm25936-201ENSMUST00000179952 114 ntBASIC1.2□□□□□ -2.22
Upk3bQ80YF6 Gm27959-201ENSMUST00000185172 111 ntBASIC1.2□□□□□ -2.22
Upk3bQ80YF6 Gm23100-201ENSMUST00000083455 141 ntBASIC1.2□□□□□ -2.22
Upk3bQ80YF6 Gm25409-201ENSMUST00000083764 131 ntBASIC1.2□□□□□ -2.22
Upk3bQ80YF6 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Upk3bQ80YF6 Gm22761-201ENSMUST00000102278 96 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm24263-201ENSMUST00000104059 107 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm26011-201ENSMUST00000104410 104 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm44489-201ENSMUST00000104619 97 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm15069-201ENSMUST00000117792 192 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm11644-201ENSMUST00000119735 150 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm15068-201ENSMUST00000119796 192 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm14671-201ENSMUST00000121790 262 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm26337-201ENSMUST00000178000 79 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm23567-201ENSMUST00000178005 107 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm44483-201ENSMUST00000197203 97 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Upk3bQ80YF6 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Upk3bQ80YF6 mt-Ta-201ENSMUST00000082398 69 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.19□□□□□ -2.22
Upk3bQ80YF6 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Gm25168-201ENSMUST00000104189 132 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Gm14567-201ENSMUST00000117155 174 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Gm11856-201ENSMUST00000118712 276 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Gm12309-201ENSMUST00000119889 182 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Gm18665-201ENSMUST00000189783 270 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Gm38364-201ENSMUST00000191814 179 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Trbv7-201ENSMUST00000193339 402 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Upk3bQ80YF6 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Gm22283-201ENSMUST00000082556 161 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Gm26922-201ENSMUST00000082687 72 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Mir320-201ENSMUST00000083594 82 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Gm22576-201ENSMUST00000083733 104 ntBASIC1.18□□□□□ -2.22
Upk3bQ80YF6 Mir758-201ENSMUST00000103260 81 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Gm23391-201ENSMUST00000157579 104 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Gm26291-201ENSMUST00000158889 137 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Mir3092-201ENSMUST00000174954 96 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Mir5118-201ENSMUST00000175551 67 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Gm27672-201ENSMUST00000183751 204 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Gm29613-201ENSMUST00000185846 313 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Gm29544-201ENSMUST00000188860 313 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Gm28808-201ENSMUST00000190978 313 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Gm43602-201ENSMUST00000196772 300 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Gm45471-201ENSMUST00000211270 281 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Gm22297-201ENSMUST00000083312 106 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Mir201-201ENSMUST00000083470 66 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 Snord7-201ENSMUST00000083781 97 ntBASIC1.17□□□□□ -2.22
Upk3bQ80YF6 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Mir653-201ENSMUST00000102402 85 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Mir466b-3-201ENSMUST00000103806 81 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm13588-201ENSMUST00000120026 135 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm16186-201ENSMUST00000120132 216 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm24747-201ENSMUST00000157835 87 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm27711-201ENSMUST00000183802 118 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm28409-201ENSMUST00000187064 103 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm23299-201ENSMUST00000082708 79 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm24461-201ENSMUST00000082735 103 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm23722-201ENSMUST00000083002 130 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Upk3bQ80YF6 BC022960-201ENSMUST00000119987 1815 ntBASIC1.16□□□□□ -2.22
Upk3bQ80YF6 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Upk3bQ80YF6 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Gm25376-201ENSMUST00000104340 133 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Gm23170-201ENSMUST00000157158 106 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Mir1931-201ENSMUST00000158589 119 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Gm22802-201ENSMUST00000175621 89 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Gm22775-201ENSMUST00000177630 120 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Gm23569-201ENSMUST00000180120 120 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Mir7068-201ENSMUST00000183439 74 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Gm37116-201ENSMUST00000195161 147 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Gm23239-201ENSMUST00000083006 181 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Snord61-201ENSMUST00000083176 71 ntBASIC1.15□□□□□ -2.23
Upk3bQ80YF6 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Mir544-201ENSMUST00000103813 78 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm26076-201ENSMUST00000104065 105 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm25878-201ENSMUST00000104327 93 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm25495-201ENSMUST00000104431 131 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm23907-201ENSMUST00000104595 189 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm14502-201ENSMUST00000118154 113 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm11857-201ENSMUST00000119817 324 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm22796-201ENSMUST00000157234 106 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm22966-201ENSMUST00000157957 129 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm37545-201ENSMUST00000186512 148 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Ighv15-1-201ENSMUST00000194450 276 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm22743-201ENSMUST00000083445 133 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Mir19b-2-201ENSMUST00000083539 84 ntBASIC1.14□□□□□ -2.23
Upk3bQ80YF6 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.13□□□□□ -2.23
Upk3bQ80YF6 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.13□□□□□ -2.23
Upk3bQ80YF6 Gm22227-201ENSMUST00000157356 259 ntBASIC1.13□□□□□ -2.23
Upk3bQ80YF6 Gm23277-201ENSMUST00000157914 136 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms