Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.67□□□□□ -2.52
Nup98Q6PFD9 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.67□□□□□ -2.52
Nup98Q6PFD9 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.67□□□□□ -2.52
Nup98Q6PFD9 Gm24512-201ENSMUST00000174963 65 ntBASIC-0.67□□□□□ -2.52
Nup98Q6PFD9 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.67□□□□□ -2.52
Nup98Q6PFD9 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Gm24487-201ENSMUST00000178017 63 ntBASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Gm45544-201ENSMUST00000211130 88 ntBASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Gm22435-201ENSMUST00000158552 128 ntBASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Gm26073-201ENSMUST00000179906 127 ntBASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC-0.68□□□□□ -2.52
Nup98Q6PFD9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC-0.69□□□□□ -2.52
Nup98Q6PFD9 Gm23101-201ENSMUST00000157550 137 ntBASIC-0.69□□□□□ -2.52
Nup98Q6PFD9 Gm22733-201ENSMUST00000158094 91 ntBASIC-0.69□□□□□ -2.52
Nup98Q6PFD9 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.69□□□□□ -2.52
Nup98Q6PFD9 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC-0.69□□□□□ -2.52
Nup98Q6PFD9 Mir6390-201ENSMUST00000184405 129 ntBASIC-0.69□□□□□ -2.52
Nup98Q6PFD9 Gm44392-201ENSMUST00000196758 115 ntBASIC-0.69□□□□□ -2.52
Nup98Q6PFD9 Gm44135-201ENSMUST00000205221 368 ntBASIC-0.69□□□□□ -2.52
Nup98Q6PFD9 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.69□□□□□ -2.52
Nup98Q6PFD9 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Mir190b-201ENSMUST00000104803 80 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Gm24853-201ENSMUST00000158026 121 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Gm23665-201ENSMUST00000158054 62 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Gm23763-201ENSMUST00000158345 60 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Gm23182-201ENSMUST00000158688 135 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Gm28439-201ENSMUST00000187714 876 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Gm45403-201ENSMUST00000209453 276 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 AC120394.1-201ENSMUST00000217153 351 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 AC112972.1-201ENSMUST00000227329 365 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Mir465c-1-201ENSMUST00000093560 81 ntBASIC-0.7□□□□□ -2.52
Nup98Q6PFD9 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Gm44615-201ENSMUST00000206548 358 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Gm25404-201ENSMUST00000082970 107 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Snora62-201ENSMUST00000082991 149 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Gm27659-201ENSMUST00000183472 98 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Gm44057-201ENSMUST00000204547 96 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Gm23404-201ENSMUST00000082543 97 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Mir96-201ENSMUST00000083652 106 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Gm25859-201ENSMUST00000083710 91 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Gm25207-201ENSMUST00000093745 107 ntBASIC-0.71□□□□□ -2.52
Nup98Q6PFD9 Gm24141-201ENSMUST00000122776 115 ntBASIC-0.72□□□□□ -2.52
Nup98Q6PFD9 Gm23194-201ENSMUST00000158813 105 ntBASIC-0.72□□□□□ -2.52
Nup98Q6PFD9 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC-0.72□□□□□ -2.52
Nup98Q6PFD9 Gm24111-201ENSMUST00000175491 97 ntBASIC-0.72□□□□□ -2.52
Nup98Q6PFD9 Gm22118-201ENSMUST00000175593 171 ntBASIC-0.72□□□□□ -2.52
Nup98Q6PFD9 Mir7661-201ENSMUST00000197023 61 ntBASIC-0.72□□□□□ -2.52
Nup98Q6PFD9 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.72□□□□□ -2.52
Nup98Q6PFD9 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm20462-201ENSMUST00000172623 408 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm28506-201ENSMUST00000189937 150 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm44473-201ENSMUST00000204039 152 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm25801-201ENSMUST00000082638 106 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm27047-201ENSMUST00000183072 1819 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm26018-201ENSMUST00000104406 128 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm23111-201ENSMUST00000122652 105 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm22113-201ENSMUST00000158343 104 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC-0.73□□□□□ -2.53
Nup98Q6PFD9 Gm13518-201ENSMUST00000120018 233 ntBASIC-0.74□□□□□ -2.53
Nup98Q6PFD9 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.74□□□□□ -2.53
Nup98Q6PFD9 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.74□□□□□ -2.53
Nup98Q6PFD9 n-R5s183-201ENSMUST00000083939 115 ntBASIC-0.74□□□□□ -2.53
Nup98Q6PFD9 Gm25781-201ENSMUST00000122527 84 ntBASIC-0.75□□□□□ -2.53
Nup98Q6PFD9 Gm27540-201ENSMUST00000184950 187 ntBASIC-0.75□□□□□ -2.53
Nup98Q6PFD9 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC-0.75□□□□□ -2.53
Nup98Q6PFD9 Mir1949-202ENSMUST00000199259 70 ntBASIC-0.75□□□□□ -2.53
Nup98Q6PFD9 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
Nup98Q6PFD9 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
Nup98Q6PFD9 Gm22652-201ENSMUST00000083207 131 ntBASIC-0.75□□□□□ -2.53
Nup98Q6PFD9 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.75□□□□□ -2.53
Nup98Q6PFD9 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 Gm22815-201ENSMUST00000157451 62 ntBASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.76□□□□□ -2.53
Nup98Q6PFD9 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 76,532 protein–RNA pairs in 186 ms