Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm24453-201ENSMUST00000083346 76 ntBASIC1.24□□□□□ -2.21
Herc4Q6PAV2 Mir196b-201ENSMUST00000083509 85 ntBASIC1.24□□□□□ -2.21
Herc4Q6PAV2 Gm24494-201ENSMUST00000083804 81 ntBASIC1.24□□□□□ -2.21
Herc4Q6PAV2 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.23□□□□□ -2.21
Herc4Q6PAV2 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.23□□□□□ -2.21
Herc4Q6PAV2 Gm24594-201ENSMUST00000122502 99 ntBASIC1.23□□□□□ -2.21
Herc4Q6PAV2 Gm22477-201ENSMUST00000122569 316 ntBASIC1.23□□□□□ -2.21
Herc4Q6PAV2 Gm22337-201ENSMUST00000157721 132 ntBASIC1.23□□□□□ -2.21
Herc4Q6PAV2 Gm23340-201ENSMUST00000158955 123 ntBASIC1.23□□□□□ -2.21
Herc4Q6PAV2 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Herc4Q6PAV2 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.23□□□□□ -2.21
Herc4Q6PAV2 Snord47-201ENSMUST00000083034 77 ntBASIC1.23□□□□□ -2.21
Herc4Q6PAV2 Gm25627-201ENSMUST00000084003 153 ntBASIC1.23□□□□□ -2.21
Herc4Q6PAV2 Gm22785-201ENSMUST00000104087 132 ntBASIC1.22□□□□□ -2.21
Herc4Q6PAV2 Gm24132-201ENSMUST00000104745 91 ntBASIC1.22□□□□□ -2.21
Herc4Q6PAV2 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Herc4Q6PAV2 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.22□□□□□ -2.21
Herc4Q6PAV2 Gm23339-201ENSMUST00000158962 139 ntBASIC1.22□□□□□ -2.21
Herc4Q6PAV2 Gm22403-201ENSMUST00000174919 84 ntBASIC1.22□□□□□ -2.21
Herc4Q6PAV2 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.22□□□□□ -2.21
Herc4Q6PAV2 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.22□□□□□ -2.21
Herc4Q6PAV2 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.22□□□□□ -2.21
Herc4Q6PAV2 Gm11792-201ENSMUST00000120640 168 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Gm24015-201ENSMUST00000157725 232 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Gm25750-201ENSMUST00000175483 112 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Gm23419-201ENSMUST00000175523 84 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Gm16399-201ENSMUST00000181423 219 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Mir6481-201ENSMUST00000184617 110 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Herc4Q6PAV2 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Gm25142-201ENSMUST00000082698 107 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Mir34a-201ENSMUST00000083559 102 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Gm27047-201ENSMUST00000183072 1819 ntBASIC1.21□□□□□ -2.22
Herc4Q6PAV2 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm22586-201ENSMUST00000157507 122 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm25663-201ENSMUST00000157698 135 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm22553-201ENSMUST00000157797 295 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm24750-201ENSMUST00000157843 104 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm25494-201ENSMUST00000158143 100 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm22348-201ENSMUST00000178674 79 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm27419-201ENSMUST00000184576 109 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm37624-201ENSMUST00000193751 219 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm42855-201ENSMUST00000197388 253 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm42506-201ENSMUST00000202009 150 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm36189-201ENSMUST00000204113 523 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Gm23299-201ENSMUST00000082708 79 ntBASIC1.2□□□□□ -2.22
Herc4Q6PAV2 Snord71-201ENSMUST00000104361 85 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Gm14536-201ENSMUST00000118324 138 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Gm15027-201ENSMUST00000120922 138 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Gm23665-201ENSMUST00000158054 62 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Gm22767-201ENSMUST00000158365 165 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Gm26363-201ENSMUST00000158866 83 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Gm22911-201ENSMUST00000177920 107 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Mir6381-201ENSMUST00000183426 87 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Mir6350-201ENSMUST00000183639 105 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Mir6985-201ENSMUST00000184641 61 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Gm44458-201ENSMUST00000196594 143 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Gm25895-201ENSMUST00000083714 100 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Mir471-201ENSMUST00000093596 67 ntBASIC1.19□□□□□ -2.22
Herc4Q6PAV2 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm23988-201ENSMUST00000117034 122 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm23106-201ENSMUST00000157554 101 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm23898-201ENSMUST00000158111 103 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm25768-201ENSMUST00000158570 98 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm25044-201ENSMUST00000158603 104 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm25935-201ENSMUST00000178746 107 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm38183-201ENSMUST00000193189 205 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm43602-201ENSMUST00000196772 300 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm18188-201ENSMUST00000219386 478 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.18□□□□□ -2.22
Herc4Q6PAV2 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Snord82-201ENSMUST00000082889 70 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm22973-201ENSMUST00000083298 191 ntBASIC1.18□□□□□ -2.22
Herc4Q6PAV2 Gm26074-201ENSMUST00000104063 129 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Gm11334-201ENSMUST00000121969 156 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Gm22802-201ENSMUST00000175621 89 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Mir669k-201ENSMUST00000177742 127 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Gm25673-201ENSMUST00000179957 127 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Gm27699-201ENSMUST00000183553 180 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Gm27285-201ENSMUST00000183875 127 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Gm22884-201ENSMUST00000083127 140 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Mir344-201ENSMUST00000083634 95 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Gm24523-201ENSMUST00000083965 132 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Mir490-201ENSMUST00000093567 84 ntBASIC1.17□□□□□ -2.22
Herc4Q6PAV2 Gm24375-201ENSMUST00000104397 132 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 Gm24588-201ENSMUST00000116696 83 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 Mir1904-201ENSMUST00000122702 80 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 Gm25223-201ENSMUST00000158200 110 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 Gm23113-201ENSMUST00000158477 99 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 Gm24634-201ENSMUST00000158672 107 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 Gm22565-201ENSMUST00000175540 69 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 Mir21b-201ENSMUST00000184317 108 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 Gm43199-201ENSMUST00000200019 307 ntBASIC1.16□□□□□ -2.22
Herc4Q6PAV2 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 181.5 ms