Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm22384-201ENSMUST00000158187 104 ntBASIC1.52□□□□□ -2.17
Krt39Q6IFX4 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Krt39Q6IFX4 Gm25636-201ENSMUST00000082666 133 ntBASIC1.52□□□□□ -2.17
Krt39Q6IFX4 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Krt39Q6IFX4 Gm22477-201ENSMUST00000122569 316 ntBASIC1.51□□□□□ -2.17
Krt39Q6IFX4 Gm25423-201ENSMUST00000157609 107 ntBASIC1.51□□□□□ -2.17
Krt39Q6IFX4 Gm23122-201ENSMUST00000157645 103 ntBASIC1.51□□□□□ -2.17
Krt39Q6IFX4 Gm22862-201ENSMUST00000178593 121 ntBASIC1.51□□□□□ -2.17
Krt39Q6IFX4 Gm29613-201ENSMUST00000185846 313 ntBASIC1.51□□□□□ -2.17
Krt39Q6IFX4 Gm29544-201ENSMUST00000188860 313 ntBASIC1.51□□□□□ -2.17
Krt39Q6IFX4 Gm28808-201ENSMUST00000190978 313 ntBASIC1.51□□□□□ -2.17
Krt39Q6IFX4 Gm44338-201ENSMUST00000198614 110 ntBASIC1.51□□□□□ -2.17
Krt39Q6IFX4 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.51□□□□□ -2.17
Krt39Q6IFX4 Gm26080-201ENSMUST00000104069 131 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Gm22850-201ENSMUST00000157714 82 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Gm22163-201ENSMUST00000158408 135 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Mir1966-201ENSMUST00000158807 108 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Mir7039-201ENSMUST00000183852 85 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Gm18502-201ENSMUST00000218679 199 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Gm26454-201ENSMUST00000082682 107 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Mir186-201ENSMUST00000083497 71 ntBASIC1.5□□□□□ -2.17
Krt39Q6IFX4 Gm23320-201ENSMUST00000104462 127 ntBASIC1.49□□□□□ -2.17
Krt39Q6IFX4 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.49□□□□□ -2.17
Krt39Q6IFX4 Gm22946-201ENSMUST00000158558 82 ntBASIC1.49□□□□□ -2.17
Krt39Q6IFX4 AC153646.2-201ENSMUST00000220516 109 ntBASIC1.49□□□□□ -2.17
Krt39Q6IFX4 Gm22306-201ENSMUST00000082692 107 ntBASIC1.49□□□□□ -2.17
Krt39Q6IFX4 Gm23947-201ENSMUST00000093636 107 ntBASIC1.49□□□□□ -2.17
Krt39Q6IFX4 Gm25759-201ENSMUST00000103988 129 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm22612-201ENSMUST00000158293 101 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm24676-201ENSMUST00000158758 75 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm44325-201ENSMUST00000196757 77 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm44470-201ENSMUST00000203913 142 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm44057-201ENSMUST00000204547 96 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm8219-201ENSMUST00000218309 242 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm25812-201ENSMUST00000082751 103 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm25814-201ENSMUST00000082754 107 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm25697-201ENSMUST00000082902 98 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm24261-201ENSMUST00000083744 104 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm25627-201ENSMUST00000084003 153 ntBASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Krt39Q6IFX4 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Gm24263-201ENSMUST00000104059 107 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Gm26074-201ENSMUST00000104063 129 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Gm11334-201ENSMUST00000121969 156 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Gm25323-201ENSMUST00000122555 103 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Gm22559-201ENSMUST00000157329 134 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Gm22967-201ENSMUST00000157956 239 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Gm25558-201ENSMUST00000158083 106 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Gm26360-201ENSMUST00000158872 103 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Gm42719-201ENSMUST00000197393 355 ntBASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
Krt39Q6IFX4 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.17
Krt39Q6IFX4 Gm12309-201ENSMUST00000119889 182 ntBASIC1.46□□□□□ -2.18
Krt39Q6IFX4 Gm22349-201ENSMUST00000157864 107 ntBASIC1.46□□□□□ -2.18
Krt39Q6IFX4 Gm26291-201ENSMUST00000158889 137 ntBASIC1.46□□□□□ -2.18
Krt39Q6IFX4 Gm23922-201ENSMUST00000178792 79 ntBASIC1.46□□□□□ -2.18
Krt39Q6IFX4 Gm24657-201ENSMUST00000180085 79 ntBASIC1.46□□□□□ -2.18
Krt39Q6IFX4 Gm22996-201ENSMUST00000180236 79 ntBASIC1.46□□□□□ -2.18
Krt39Q6IFX4 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.46□□□□□ -2.18
Krt39Q6IFX4 Gm23907-201ENSMUST00000104595 189 ntBASIC1.45□□□□□ -2.18
Krt39Q6IFX4 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.45□□□□□ -2.18
Krt39Q6IFX4 Snord13-201ENSMUST00000157627 104 ntBASIC1.45□□□□□ -2.18
Krt39Q6IFX4 Gm24366-201ENSMUST00000175383 86 ntBASIC1.45□□□□□ -2.18
Krt39Q6IFX4 Gm26337-201ENSMUST00000178000 79 ntBASIC1.45□□□□□ -2.18
Krt39Q6IFX4 Mir7675-201ENSMUST00000184262 58 ntBASIC1.45□□□□□ -2.18
Krt39Q6IFX4 CT485607.2-201ENSMUST00000214650 91 ntBASIC1.45□□□□□ -2.18
Krt39Q6IFX4 Gm22738-201ENSMUST00000083440 147 ntBASIC1.45□□□□□ -2.18
Krt39Q6IFX4 Gm10172-201ENSMUST00000085929 558 ntBASIC1.45□□□□□ -2.18
Krt39Q6IFX4 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Mir669b-201ENSMUST00000102172 97 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm25495-201ENSMUST00000104431 131 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Snord100-201ENSMUST00000116836 74 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm22790-201ENSMUST00000157229 129 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm22551-201ENSMUST00000157795 103 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm23898-201ENSMUST00000158111 103 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm28409-201ENSMUST00000187064 103 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm28669-201ENSMUST00000188400 100 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm38364-201ENSMUST00000191814 179 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm44483-201ENSMUST00000197203 97 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm23239-201ENSMUST00000083006 181 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Krt39Q6IFX4 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.44□□□□□ -2.18
Krt39Q6IFX4 Gm22105-201ENSMUST00000116734 116 ntBASIC1.43□□□□□ -2.18
Krt39Q6IFX4 Gm15069-201ENSMUST00000117792 192 ntBASIC1.43□□□□□ -2.18
Krt39Q6IFX4 Gm15068-201ENSMUST00000119796 192 ntBASIC1.43□□□□□ -2.18
Krt39Q6IFX4 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.43□□□□□ -2.18
Krt39Q6IFX4 Gm24559-201ENSMUST00000157519 121 ntBASIC1.43□□□□□ -2.18
Krt39Q6IFX4 Gm23080-201ENSMUST00000157846 103 ntBASIC1.43□□□□□ -2.18
Krt39Q6IFX4 Gm27711-201ENSMUST00000183802 118 ntBASIC1.43□□□□□ -2.18
Krt39Q6IFX4 Mir6905-201ENSMUST00000184228 70 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 148.9 ms