Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Gm25680-201ENSMUST00000116917 126 ntBASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Gm22635-201ENSMUST00000116962 126 ntBASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 DQ267100-201ENSMUST00000122600 72 ntBASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Gm25884-201ENSMUST00000157782 62 ntBASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Gm24922-201ENSMUST00000158511 102 ntBASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Gm25711-201ENSMUST00000158633 128 ntBASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 AC166341.8-201ENSMUST00000221267 108 ntBASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Sh3rf1Q69ZI1 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 Gm16355-201ENSMUST00000128606 231 ntBASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 Gm24649-201ENSMUST00000157106 134 ntBASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 Gm20409-201ENSMUST00000173457 130 ntBASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 Gm25707-201ENSMUST00000175120 96 ntBASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 Mir7242-201ENSMUST00000183710 79 ntBASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 Gm43626-201ENSMUST00000198575 162 ntBASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 Gm43977-201ENSMUST00000203970 189 ntBASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.61□□□□□ -1.99
Sh3rf1Q69ZI1 AC153950.1-201ENSMUST00000219916 3238 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Gm23983-201ENSMUST00000157142 114 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Gm23601-201ENSMUST00000157259 131 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Gm23898-201ENSMUST00000158111 103 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Gm22664-201ENSMUST00000158719 105 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Gm24203-201ENSMUST00000082949 114 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Snord118-201ENSMUST00000082965 135 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Mir29c-201ENSMUST00000083614 88 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Gm25628-201ENSMUST00000084002 105 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Sh3rf1Q69ZI1 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 Gm25485-201ENSMUST00000104120 132 ntBASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 Mir466k-201ENSMUST00000116774 122 ntBASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 Gm26494-201ENSMUST00000083154 143 ntBASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 Snord104-201ENSMUST00000083192 70 ntBASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 Gm24261-201ENSMUST00000083744 104 ntBASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 Gm24493-201ENSMUST00000083805 143 ntBASIC2.59□□□□□ -1.99
Sh3rf1Q69ZI1 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.59□□□□□ -2
Sh3rf1Q69ZI1 Gm22067-201ENSMUST00000122790 107 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Gm23986-201ENSMUST00000157144 63 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Gm26411-201ENSMUST00000157668 107 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Mir7068-201ENSMUST00000183439 74 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Gm27365-201ENSMUST00000184041 177 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Gm22283-201ENSMUST00000082556 161 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Gm24038-201ENSMUST00000082872 159 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Gm23249-201ENSMUST00000083369 161 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Sh3rf1Q69ZI1 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm45265-201ENSMUST00000210852 2497 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm23980-201ENSMUST00000157135 158 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm24291-201ENSMUST00000157633 162 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm24075-201ENSMUST00000158175 72 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm23261-201ENSMUST00000158316 136 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm25976-201ENSMUST00000158695 130 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Traj61-201ENSMUST00000165025 72 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm44478-201ENSMUST00000204875 114 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm45522-201ENSMUST00000210784 166 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm45544-201ENSMUST00000211130 88 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm25697-201ENSMUST00000082902 98 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.57□□□□□ -2
Sh3rf1Q69ZI1 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Mir682-201ENSMUST00000102281 96 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Gm12309-201ENSMUST00000119889 182 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 n-R5s73-201ENSMUST00000122508 107 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Gm26105-201ENSMUST00000157253 190 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Gm23600-201ENSMUST00000157260 71 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Gm22731-201ENSMUST00000158086 94 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Mir7013-201ENSMUST00000183540 72 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Mir6905-201ENSMUST00000184228 70 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Gm42807-201ENSMUST00000200141 329 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Gm26109-201ENSMUST00000083970 70 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.56□□□□□ -2
Sh3rf1Q69ZI1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Sh3rf1Q69ZI1 Gm42960-201ENSMUST00000202160 241 ntBASIC2.55□□□□□ -2
Sh3rf1Q69ZI1 Gm45386-201ENSMUST00000210194 218 ntBASIC2.55□□□□□ -2
Sh3rf1Q69ZI1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.55□□□□□ -2
Sh3rf1Q69ZI1 Gm22622-201ENSMUST00000082870 129 ntBASIC2.55□□□□□ -2
Sh3rf1Q69ZI1 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Sh3rf1Q69ZI1 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Sh3rf1Q69ZI1 Gm22706-201ENSMUST00000157907 112 ntBASIC2.54□□□□□ -2
Sh3rf1Q69ZI1 Gm25476-201ENSMUST00000175125 185 ntBASIC2.54□□□□□ -2
Sh3rf1Q69ZI1 Gm28900-201ENSMUST00000185232 156 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 240.2 ms