Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.3□□□□□ -2.46
Trav2Q5R1I9 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.3□□□□□ -2.46
Trav2Q5R1I9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.3□□□□□ -2.46
Trav2Q5R1I9 Mir191-201ENSMUST00000196210 74 ntBASIC-0.3□□□□□ -2.46
Trav2Q5R1I9 Gm43472-201ENSMUST00000200175 154 ntBASIC-0.3□□□□□ -2.46
Trav2Q5R1I9 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.3□□□□□ -2.46
Trav2Q5R1I9 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.3□□□□□ -2.46
Trav2Q5R1I9 Mir141-201ENSMUST00000083540 72 ntBASIC-0.3□□□□□ -2.46
Trav2Q5R1I9 Gm12785-201ENSMUST00000122052 172 ntBASIC-0.31□□□□□ -2.46
Trav2Q5R1I9 Gm22199-201ENSMUST00000122660 126 ntBASIC-0.31□□□□□ -2.46
Trav2Q5R1I9 Gm24728-201ENSMUST00000158226 125 ntBASIC-0.31□□□□□ -2.46
Trav2Q5R1I9 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.31□□□□□ -2.46
Trav2Q5R1I9 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC-0.31□□□□□ -2.46
Trav2Q5R1I9 AC116589.4-201ENSMUST00000222390 216 ntBASIC-0.31□□□□□ -2.46
Trav2Q5R1I9 Gm23301-201ENSMUST00000082713 65 ntBASIC-0.31□□□□□ -2.46
Trav2Q5R1I9 Gm24043-201ENSMUST00000083108 116 ntBASIC-0.31□□□□□ -2.46
Trav2Q5R1I9 Gm24509-201ENSMUST00000157086 101 ntBASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 Gm25358-201ENSMUST00000157189 101 ntBASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 Gm23571-201ENSMUST00000180073 127 ntBASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 Gm7654-201ENSMUST00000186738 683 ntBASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 Gm44464-201ENSMUST00000198010 138 ntBASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 AC154484.1-201ENSMUST00000227311 771 ntBASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 Gm24460-201ENSMUST00000082731 106 ntBASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 Gm25894-201ENSMUST00000083458 75 ntBASIC-0.32□□□□□ -2.46
Trav2Q5R1I9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC-0.33□□□□□ -2.46
Trav2Q5R1I9 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.33□□□□□ -2.46
Trav2Q5R1I9 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.33□□□□□ -2.46
Trav2Q5R1I9 Gm25444-201ENSMUST00000158999 113 ntBASIC-0.34□□□□□ -2.46
Trav2Q5R1I9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
Trav2Q5R1I9 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.34□□□□□ -2.46
Trav2Q5R1I9 Gm37763-201ENSMUST00000193445 120 ntBASIC-0.34□□□□□ -2.46
Trav2Q5R1I9 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.34□□□□□ -2.46
Trav2Q5R1I9 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.34□□□□□ -2.46
Trav2Q5R1I9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC-0.34□□□□□ -2.46
Trav2Q5R1I9 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-0.35□□□□□ -2.47
Trav2Q5R1I9 Gm22791-201ENSMUST00000157232 145 ntBASIC-0.35□□□□□ -2.47
Trav2Q5R1I9 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.35□□□□□ -2.47
Trav2Q5R1I9 Gm38183-201ENSMUST00000193189 205 ntBASIC-0.35□□□□□ -2.47
Trav2Q5R1I9 Gm26123-201ENSMUST00000083363 135 ntBASIC-0.35□□□□□ -2.47
Trav2Q5R1I9 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.36□□□□□ -2.47
Trav2Q5R1I9 Gm27993-201ENSMUST00000184362 85 ntBASIC-0.36□□□□□ -2.47
Trav2Q5R1I9 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC-0.36□□□□□ -2.47
Trav2Q5R1I9 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.36□□□□□ -2.47
Trav2Q5R1I9 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.36□□□□□ -2.47
Trav2Q5R1I9 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.36□□□□□ -2.47
Trav2Q5R1I9 Mir3535-201ENSMUST00000197651 147 ntBASIC-0.36□□□□□ -2.47
Trav2Q5R1I9 AC132437.1-201ENSMUST00000218308 320 ntBASIC-0.36□□□□□ -2.47
Trav2Q5R1I9 AC154282.1-201ENSMUST00000223154 265 ntBASIC-0.36□□□□□ -2.47
Trav2Q5R1I9 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 Gm15069-201ENSMUST00000117792 192 ntBASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 Gm15068-201ENSMUST00000119796 192 ntBASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 Gm13246-201ENSMUST00000120994 315 ntBASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 Gm24499-201ENSMUST00000158446 104 ntBASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 Gm24810-201ENSMUST00000175317 70 ntBASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 Gm24453-201ENSMUST00000083346 76 ntBASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Trav2Q5R1I9 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.38□□□□□ -2.47
Trav2Q5R1I9 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC-0.38□□□□□ -2.47
Trav2Q5R1I9 Gm27755-201ENSMUST00000184623 132 ntBASIC-0.38□□□□□ -2.47
Trav2Q5R1I9 Gm28849-201ENSMUST00000188127 174 ntBASIC-0.38□□□□□ -2.47
Trav2Q5R1I9 Mir721-201ENSMUST00000200230 88 ntBASIC-0.38□□□□□ -2.47
Trav2Q5R1I9 AC125311.1-201ENSMUST00000226950 220 ntBASIC-0.38□□□□□ -2.47
Trav2Q5R1I9 Gm26495-201ENSMUST00000083152 137 ntBASIC-0.38□□□□□ -2.47
Trav2Q5R1I9 Mir532-201ENSMUST00000093630 96 ntBASIC-0.38□□□□□ -2.47
Trav2Q5R1I9 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
Trav2Q5R1I9 Gm13801-201ENSMUST00000120750 160 ntBASIC-0.39□□□□□ -2.47
Trav2Q5R1I9 Gm13725-201ENSMUST00000122139 207 ntBASIC-0.39□□□□□ -2.47
Trav2Q5R1I9 Gm24629-201ENSMUST00000122762 89 ntBASIC-0.39□□□□□ -2.47
Trav2Q5R1I9 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.39□□□□□ -2.47
Trav2Q5R1I9 Gm43563-201ENSMUST00000196761 198 ntBASIC-0.39□□□□□ -2.47
Trav2Q5R1I9 Gm44989-201ENSMUST00000204749 217 ntBASIC-0.39□□□□□ -2.47
Trav2Q5R1I9 Gm26071-201ENSMUST00000083261 107 ntBASIC-0.39□□□□□ -2.47
Trav2Q5R1I9 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
Trav2Q5R1I9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-0.4□□□□□ -2.47
Trav2Q5R1I9 Gm15213-201ENSMUST00000122098 216 ntBASIC-0.4□□□□□ -2.47
Trav2Q5R1I9 Gm43238-201ENSMUST00000196463 359 ntBASIC-0.4□□□□□ -2.47
Trav2Q5R1I9 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.4□□□□□ -2.47
Trav2Q5R1I9 AC145736.2-201ENSMUST00000216305 365 ntBASIC-0.4□□□□□ -2.47
Trav2Q5R1I9 AC115735.2-201ENSMUST00000227135 351 ntBASIC-0.4□□□□□ -2.47
Trav2Q5R1I9 Gm22303-201ENSMUST00000082686 122 ntBASIC-0.4□□□□□ -2.47
Trav2Q5R1I9 Gm24150-201ENSMUST00000082759 104 ntBASIC-0.4□□□□□ -2.47
Trav2Q5R1I9 Mir18-201ENSMUST00000083469 96 ntBASIC-0.4□□□□□ -2.47
Trav2Q5R1I9 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 Gm13922-201ENSMUST00000119505 156 ntBASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 Gm13341-201ENSMUST00000120780 672 ntBASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 Gm43624-201ENSMUST00000197368 180 ntBASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 Gm29818-201ENSMUST00000218070 165 ntBASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 AC164297.5-201ENSMUST00000224365 198 ntBASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 Mir377-201ENSMUST00000083504 68 ntBASIC-0.41□□□□□ -2.48
Trav2Q5R1I9 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
Trav2Q5R1I9 Gm12647-201ENSMUST00000118977 265 ntBASIC-0.42□□□□□ -2.48
Trav2Q5R1I9 Gm14298-201ENSMUST00000139032 237 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 206.8 ms