Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
Usp28Q5I043 Gm23130-201ENSMUST00000104252 74 ntBASIC0.77□□□□□ -2.29
Usp28Q5I043 Gm23841-201ENSMUST00000116951 114 ntBASIC0.77□□□□□ -2.29
Usp28Q5I043 Snora15-201ENSMUST00000177461 131 ntBASIC0.77□□□□□ -2.29
Usp28Q5I043 Gm27365-201ENSMUST00000184041 177 ntBASIC0.77□□□□□ -2.29
Usp28Q5I043 Gm38113-201ENSMUST00000193704 201 ntBASIC0.77□□□□□ -2.29
Usp28Q5I043 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC0.77□□□□□ -2.29
Usp28Q5I043 Gm25878-201ENSMUST00000104327 93 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Gm13246-201ENSMUST00000120994 315 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Gm22200-201ENSMUST00000158614 67 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Gm22914-201ENSMUST00000175195 77 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Mir468-201ENSMUST00000197332 78 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Gm45544-201ENSMUST00000211130 88 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Snora20-201ENSMUST00000082703 128 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Mir384-201ENSMUST00000083565 88 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Snord35a-201ENSMUST00000083884 90 ntBASIC0.76□□□□□ -2.29
Usp28Q5I043 Mir541-201ENSMUST00000102097 90 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm15069-201ENSMUST00000117792 192 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm12432-201ENSMUST00000119540 186 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm15068-201ENSMUST00000119796 192 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm24635-201ENSMUST00000122712 128 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm24401-201ENSMUST00000157868 91 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm24880-201ENSMUST00000158776 85 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm20386-201ENSMUST00000174010 132 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm25141-201ENSMUST00000083177 107 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm23970-201ENSMUST00000083319 107 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Mir451a-201ENSMUST00000093557 72 ntBASIC0.75□□□□□ -2.29
Usp28Q5I043 Gm11936-201ENSMUST00000118323 160 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 Gm12815-201ENSMUST00000121737 135 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 Gm25828-201ENSMUST00000157087 95 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 Gm22515-201ENSMUST00000158273 305 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 Gm6003-201ENSMUST00000187903 463 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 Gm44464-201ENSMUST00000198010 138 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 AC154282.1-201ENSMUST00000223154 265 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 AL606472.1-201ENSMUST00000224628 275 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 Gm24311-201ENSMUST00000082570 104 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 Gm22686-201ENSMUST00000082847 100 ntBASIC0.74□□□□□ -2.29
Usp28Q5I043 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.74□□□□□ -2.29
Usp28Q5I043 Gm12686-201ENSMUST00000120546 397 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm22145-201ENSMUST00000157396 148 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm24559-201ENSMUST00000157519 121 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm22767-201ENSMUST00000158365 165 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm25015-201ENSMUST00000158400 128 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm22433-201ENSMUST00000158550 142 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm25838-201ENSMUST00000158920 120 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm16539-201ENSMUST00000160086 327 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Mir1954-201ENSMUST00000175595 86 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm23047-201ENSMUST00000177661 94 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm25935-201ENSMUST00000178746 107 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm22951-201ENSMUST00000179471 107 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm18213-201ENSMUST00000207850 178 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm22809-201ENSMUST00000082743 156 ntBASIC0.73□□□□□ -2.29
Usp28Q5I043 Gm24171-201ENSMUST00000104126 131 ntBASIC0.72□□□□□ -2.29
Usp28Q5I043 Gm26301-201ENSMUST00000104813 95 ntBASIC0.72□□□□□ -2.29
Usp28Q5I043 Gm6897-201ENSMUST00000117714 138 ntBASIC0.72□□□□□ -2.29
Usp28Q5I043 Gm14758-201ENSMUST00000119104 138 ntBASIC0.72□□□□□ -2.29
Usp28Q5I043 Gm26090-201ENSMUST00000157897 128 ntBASIC0.72□□□□□ -2.29
Usp28Q5I043 Mir3109-201ENSMUST00000175301 88 ntBASIC0.72□□□□□ -2.29
Usp28Q5I043 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Usp28Q5I043 Gm44976-201ENSMUST00000205543 261 ntBASIC0.72□□□□□ -2.29
Usp28Q5I043 Gm44948-201ENSMUST00000209050 149 ntBASIC0.72□□□□□ -2.29
Usp28Q5I043 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Usp28Q5I043 Gm24271-201ENSMUST00000102327 111 ntBASIC0.71□□□□□ -2.3
Usp28Q5I043 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Usp28Q5I043 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC0.71□□□□□ -2.3
Usp28Q5I043 Gm25323-201ENSMUST00000122555 103 ntBASIC0.71□□□□□ -2.3
Usp28Q5I043 Gm22387-201ENSMUST00000158191 131 ntBASIC0.71□□□□□ -2.3
Usp28Q5I043 Mir1961-201ENSMUST00000158643 112 ntBASIC0.71□□□□□ -2.3
Usp28Q5I043 Gm27656-201ENSMUST00000185055 80 ntBASIC0.71□□□□□ -2.3
Usp28Q5I043 Gm44989-201ENSMUST00000204749 217 ntBASIC0.71□□□□□ -2.3
Usp28Q5I043 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Usp28Q5I043 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
Usp28Q5I043 Gm24379-201ENSMUST00000122695 86 ntBASIC0.7□□□□□ -2.3
Usp28Q5I043 Snora24-201ENSMUST00000174989 130 ntBASIC0.7□□□□□ -2.3
Usp28Q5I043 Gm25464-201ENSMUST00000175481 107 ntBASIC0.7□□□□□ -2.3
Usp28Q5I043 Gm24929-201ENSMUST00000083403 139 ntBASIC0.7□□□□□ -2.3
Usp28Q5I043 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC0.7□□□□□ -2.3
Usp28Q5I043 Gm24121-201ENSMUST00000102029 106 ntBASIC0.69□□□□□ -2.3
Usp28Q5I043 Mir547-201ENSMUST00000102051 78 ntBASIC0.69□□□□□ -2.3
Usp28Q5I043 Snord19-201ENSMUST00000104609 76 ntBASIC0.69□□□□□ -2.3
Usp28Q5I043 Gm23892-201ENSMUST00000158105 130 ntBASIC0.69□□□□□ -2.3
Usp28Q5I043 Gm25044-201ENSMUST00000158603 104 ntBASIC0.69□□□□□ -2.3
Usp28Q5I043 Gm25718-201ENSMUST00000158632 118 ntBASIC0.69□□□□□ -2.3
Usp28Q5I043 Gm42533-201ENSMUST00000196247 157 ntBASIC0.69□□□□□ -2.3
Usp28Q5I043 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.69□□□□□ -2.3
Usp28Q5I043 Gm27047-201ENSMUST00000183072 1819 ntBASIC0.68□□□□□ -2.3
Usp28Q5I043 Snord71-201ENSMUST00000104361 85 ntBASIC0.68□□□□□ -2.3
Usp28Q5I043 Gm22673-201ENSMUST00000104415 131 ntBASIC0.68□□□□□ -2.3
Usp28Q5I043 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
Usp28Q5I043 Gm25544-201ENSMUST00000122676 120 ntBASIC0.68□□□□□ -2.3
Usp28Q5I043 Gm23763-201ENSMUST00000158345 60 ntBASIC0.68□□□□□ -2.3
Usp28Q5I043 Gm25654-201ENSMUST00000158467 88 ntBASIC0.68□□□□□ -2.3
Usp28Q5I043 Gm27476-201ENSMUST00000183366 104 ntBASIC0.68□□□□□ -2.3
Usp28Q5I043 Mir8116-201ENSMUST00000184134 97 ntBASIC0.68□□□□□ -2.3
Usp28Q5I043 Mir448-201ENSMUST00000083516 112 ntBASIC0.68□□□□□ -2.3
Usp28Q5I043 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms